CuGenDBv2

Gene ID	HG10011504
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Genome location	Chr01:6661647..6669832
RNA-Seq Expression	HG10011504
Synteny	HG10011504
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7035782.1 hypothetical protein SDJN02_02580 [Cucurbita argyrosperma subsp. argyrosperma]

1.3e-17

51.89

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Query:  MMKVDVPMLSFFLVVLLVATTFEPISSLPSTIPAFLWSPHHRHRGWEKKRESEGSHYLNVHADSL--EAFPKDNLPRLKCTRKEVEQHVDLAIIFVGSEP
        M KVDVP L   LVVLLVA TFEP SSLPST+PAFLWSPHH H G+      +   Y  +    L      +    +  C+RK VEQHVDLAI+FVGSE 
Subjt:  MMKVDVPMLSFFLVVLLVATTFEPISSLPSTIPAFLWSPHHRHRGWEKKRESEGSHYLNVHADSL--EAFPKDNLPRLKCTRKEVEQHVDLAIIFVGSEP

Query:  TNEAMV
         ++ M+
Subjt:  TNEAMV

TYK04490.1 uncharacterized protein E5676_scaffold409G001040 [Cucumis melo var. makuwa]

1.5e-18

55.24

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Query:  MWRNREMMKVDVPMLSFFLVVLLVATTFEPISSLPSTIPAFLWSPHHRHRGWEKKRESEGSHYLNVHADSL--EAFPKDNLPRLKCTRKEVEQHVDLAII
        MW NREM +  VP L  FLVVLL A TF+PISSLPSTIPAFLWSPHHRH G+      +   Y  +    L      +    +L CT KEV+Q VDLAII
Subjt:  MWRNREMMKVDVPMLSFFLVVLLVATTFEPISSLPSTIPAFLWSPHHRHRGWEKKRESEGSHYLNVHADSL--EAFPKDNLPRLKCTRKEVEQHVDLAII

Query:  FVGSE
        FVGS+
Subjt:  FVGSE

XP_022958630.1 uncharacterized protein LOC111459798 [Cucurbita moschata]

1.3e-17

51.89

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Query:  MMKVDVPMLSFFLVVLLVATTFEPISSLPSTIPAFLWSPHHRHRGWEKKRESEGSHYLNVHADSL--EAFPKDNLPRLKCTRKEVEQHVDLAIIFVGSEP
        M KVDVP L   LVVLLVA TFEP SSLPST+PAFLWSPHH H G+      +   Y  +    L      +    +  C+RK VEQHVDLAI+FVGSE 
Subjt:  MMKVDVPMLSFFLVVLLVATTFEPISSLPSTIPAFLWSPHHRHRGWEKKRESEGSHYLNVHADSL--EAFPKDNLPRLKCTRKEVEQHVDLAIIFVGSEP

Query:  TNEAMV
         ++ M+
Subjt:  TNEAMV

XP_022996039.1 uncharacterized protein LOC111491365 [Cucurbita maxima]

5.6e-18

49.17

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Query:  MMKVDVPMLSFFLVVLLVATTFEPISSLPSTIPAFLWSPHHRHRGWEKKRESEGSHYLNVHADSL--EAFPKDNLPRLKCTRKEVEQHVDLAIIFVGSEP
        M KVDVP L   LVVLLVA TFEP SSLPST+PAFLWSPHH H G+      +   Y  +    L      +    +  C+RK VEQHVDLAI+FVGSE 
Subjt:  MMKVDVPMLSFFLVVLLVATTFEPISSLPSTIPAFLWSPHHRHRGWEKKRESEGSHYLNVHADSL--EAFPKDNLPRLKCTRKEVEQHVDLAIIFVGSEP

Query:  TNEAMV-------IKKLLRG
         ++ M+       +K LL+G
Subjt:  TNEAMV-------IKKLLRG

XP_038885229.1 uncharacterized protein LOC120075692 [Benincasa hispida]

1.1e-18

51.82

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Query:  MMKVDVPMLSFFLVVLLVATTFEPISSLPSTIPAFLWSPHHRHRGWEKKRESEGSHYLNVHADSL--EAFPKDNLPRLKCTRKEVEQHVDLAIIFVGSEP
        M KVDVPML   LVV L A TFEPISSLPST+PAFLWSPHHRHR +    E +   Y  +    L      +    ++ C  KEVEQHVDLAIIF+GSE 
Subjt:  MMKVDVPMLSFFLVVLLVATTFEPISSLPSTIPAFLWSPHHRHRGWEKKRESEGSHYLNVHADSL--EAFPKDNLPRLKCTRKEVEQHVDLAIIFVGSEP

Query:  TNEAMVIKKL
         ++ M+ +++
Subjt:  TNEAMVIKKL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KB93 Uncharacterized protein

1.2e-18

56.86

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Query:  NREMMKVDVPMLSFFLVVLLVATTFEPISSLPSTIPAFLWSPHHRHRGWEKKRESEGSHYLNVHADSL--EAFPKDNLPRLKCTRKEVEQHVDLAIIFVG
        +REM + DVP L  FLVVLL A TFEPISSLPSTIPAFLWSPH RH G+      +   Y  +    L      +    +L CT KEV+QHVDLAIIFVG
Subjt:  NREMMKVDVPMLSFFLVVLLVATTFEPISSLPSTIPAFLWSPHHRHRGWEKKRESEGSHYLNVHADSL--EAFPKDNLPRLKCTRKEVEQHVDLAIIFVG

Query:  SE
        SE
Subjt:  SE

A0A5D3BZE4 Uncharacterized protein

7.2e-19

55.24

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Query:  MWRNREMMKVDVPMLSFFLVVLLVATTFEPISSLPSTIPAFLWSPHHRHRGWEKKRESEGSHYLNVHADSL--EAFPKDNLPRLKCTRKEVEQHVDLAII
        MW NREM +  VP L  FLVVLL A TF+PISSLPSTIPAFLWSPHHRH G+      +   Y  +    L      +    +L CT KEV+Q VDLAII
Subjt:  MWRNREMMKVDVPMLSFFLVVLLVATTFEPISSLPSTIPAFLWSPHHRHRGWEKKRESEGSHYLNVHADSL--EAFPKDNLPRLKCTRKEVEQHVDLAII

Query:  FVGSE
        FVGS+
Subjt:  FVGSE

A0A6J1DJZ8 uncharacterized protein LOC111021187

6.7e-17

50.93

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Query:  MMKVDVPMLSFFLVVLLVATTFEPISSLPSTIPAFLWSPHHRHRGWEKKRESEGSHYLNVHADSL--EAFPKDNLPRLKCTRKEVEQHVDLAIIFVGSEP
        M KVDVPM+   LVV+ VA TFEPISSLPST+PAFLWSPHHR+       E +  +Y  +    L      +     + CTRK+VEQ VDLAI+FVGSE 
Subjt:  MMKVDVPMLSFFLVVLLVATTFEPISSLPSTIPAFLWSPHHRHRGWEKKRESEGSHYLNVHADSL--EAFPKDNLPRLKCTRKEVEQHVDLAIIFVGSEP

Query:  TNEAMVIK
         ++ M+ K
Subjt:  TNEAMVIK

A0A6J1H415 uncharacterized protein LOC111459798

6.1e-18

51.89

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Query:  MMKVDVPMLSFFLVVLLVATTFEPISSLPSTIPAFLWSPHHRHRGWEKKRESEGSHYLNVHADSL--EAFPKDNLPRLKCTRKEVEQHVDLAIIFVGSEP
        M KVDVP L   LVVLLVA TFEP SSLPST+PAFLWSPHH H G+      +   Y  +    L      +    +  C+RK VEQHVDLAI+FVGSE 
Subjt:  MMKVDVPMLSFFLVVLLVATTFEPISSLPSTIPAFLWSPHHRHRGWEKKRESEGSHYLNVHADSL--EAFPKDNLPRLKCTRKEVEQHVDLAIIFVGSEP

Query:  TNEAMV
         ++ M+
Subjt:  TNEAMV

A0A6J1K7L5 uncharacterized protein LOC111491365

2.7e-18

49.17

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Query:  MMKVDVPMLSFFLVVLLVATTFEPISSLPSTIPAFLWSPHHRHRGWEKKRESEGSHYLNVHADSL--EAFPKDNLPRLKCTRKEVEQHVDLAIIFVGSEP
        M KVDVP L   LVVLLVA TFEP SSLPST+PAFLWSPHH H G+      +   Y  +    L      +    +  C+RK VEQHVDLAI+FVGSE 
Subjt:  MMKVDVPMLSFFLVVLLVATTFEPISSLPSTIPAFLWSPHHRHRGWEKKRESEGSHYLNVHADSL--EAFPKDNLPRLKCTRKEVEQHVDLAIIFVGSEP

Query:  TNEAMV-------IKKLLRG
         ++ M+       +K LL+G
Subjt:  TNEAMV-------IKKLLRG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G55546.1 unknown protein

1.4e-06

32.32

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Query:  MMKVDVPMLSFFLVVLLVATTFEPISSLPSTIPAFLWSPHHRHRGWEKKRESEGSHYLNVHADSL--EAFPKDNLPRLKCTRKEVEQHVDLAIIFVGSE
        +MK+ +    + LVVL  A+  +   + PST+PAFLWSPH ++   E        +Y  + A  L    F         C+ K+++Q VD+A++F+G E
Subjt:  MMKVDVPMLSFFLVVLLVATTFEPISSLPSTIPAFLWSPHHRHRGWEKKRESEGSHYLNVHADSL--EAFPKDNLPRLKCTRKEVEQHVDLAIIFVGSE

AT3G13410.1 unknown protein

1.3e-07

35.35

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Query:  MMKVDVPMLSFFLVVLLVATTFEPISSLPSTIPAFLWSPHHRHRGWEKKRESEGSHYLNVHADSL--EAFPKDNLPRLKCTRKEVEQHVDLAIIFVGSE
        M K+ +  ++  LV L VA+ FE   + P+T+PAFLWSPH +    E     E  +Y  + A  L    F +       C+ K++EQ VD+A++F+G E
Subjt:  MMKVDVPMLSFFLVVLLVATTFEPISSLPSTIPAFLWSPHHRHRGWEKKRESEGSHYLNVHADSL--EAFPKDNLPRLKCTRKEVEQHVDLAIIFVGSE

Sequences

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CDS sequence

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ATGTGGAGAAATAGAGAGATGATGAAGGTGGATGTGCCCATGTTGAGTTTTTTTCTTGTTGTTCTCTTGGTGGCAACCACATTTGAACCCATCTCATCTTTGCCGTCCAC
TATTCCTGCGTTCCTTTGGTCTCCTCACCATCGCCATAGGGGTTGGGAGAAAAAAAGGGAATCAGAGGGAAGTCACTACCTGAACGTACATGCTGATTCACTGGAAGCTT
TCCCGAAGGACAACCTTCCGAGACTTAAGTGCACGAGAAAGGAAGTAGAGCAGCATGTGGATCTTGCAATAATCTTTGTTGGTTCAGAGCCTACTAATGAAGCTATGGTT
ATTAAAAAGCTTTTGAGGGGATTTGTATGGGAAGCCCTTGATATGAAGGGAGGAGTACCAAGTCAATTGAAGGAAGATCCAAATGGTCCTTCAGTTTGGAGGTCTAGGCA
TTGA

mRNA sequence

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Protein sequence

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MWRNREMMKVDVPMLSFFLVVLLVATTFEPISSLPSTIPAFLWSPHHRHRGWEKKRESEGSHYLNVHADSLEAFPKDNLPRLKCTRKEVEQHVDLAIIFVGSEPTNEAMV
IKKLLRGFVWEALDMKGGVPSQLKEDPNGPSVWRSRH

HG10011504 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome