CuGenDBv2

Gene ID	HG10011505
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Expansin-A1-like
Genome location	Chr01:6671349..6673001
RNA-Seq Expression	HG10011505
Synteny	HG10011505
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

TYK04490.1 uncharacterized protein E5676_scaffold409G001040 [Cucumis melo var. makuwa]

5.8e-96

83.26

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Query:  SMHVDPNLVDLLKASFSRSNFSMAFPYVAAPERGTIENLLISEFKKSCGHDLRIDNSAF------EDESFQRLPPL-HSMNDYMVSRMEKKREGETELVV
        S HVDPNL++LLK SFSRSNFSMAFPYVAAPERG +E LLISEFK+SCGHDLRI NSAF      EDESFQ+LP L HS+NDYMVSRME K EGETELV+
Subjt:  SMHVDPNLVDLLKASFSRSNFSMAFPYVAAPERGTIENLLISEFKKSCGHDLRIDNSAF------EDESFQRLPPL-HSMNDYMVSRMEKKREGETELVV

Query:  FYHGGLSSPEEFNPWTSESKTLLEIMTSAENIGAKYEILYISDPVRSIRHSYMELGRFIAEGSSQNGSAKSANFCDEVCQIKSSLLEGLFVGIVLLIILI
        F HG  SSPEE NPWTSESKTL EIMTSAE++GAKYEILYISDP RSIRHSY+ELGRF+AEGSS NGSAKS + CDEVCQIKSSLLEGLFVGIVLLIIL+
Subjt:  FYHGGLSSPEEFNPWTSESKTLLEIMTSAENIGAKYEILYISDPVRSIRHSYMELGRFIAEGSSQNGSAKSANFCDEVCQIKSSLLEGLFVGIVLLIILI

Query:  SGLCCMMGIDTPTRFETPQDS
        SGLCCMMGIDTPTRFETPQDS
Subjt:  SGLCCMMGIDTPTRFETPQDS

XP_008456728.1 PREDICTED: uncharacterized protein LOC103496586 isoform X1 [Cucumis melo]

5.8e-96

83.26

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Query:  SMHVDPNLVDLLKASFSRSNFSMAFPYVAAPERGTIENLLISEFKKSCGHDLRIDNSAF------EDESFQRLPPL-HSMNDYMVSRMEKKREGETELVV
        S HVDPNL++LLK SFSRSNFSMAFPYVAAPERG +E LLISEFK+SCGHDLRI NSAF      EDESFQ+LP L HS+NDYMVSRME K EGETELV+
Subjt:  SMHVDPNLVDLLKASFSRSNFSMAFPYVAAPERGTIENLLISEFKKSCGHDLRIDNSAF------EDESFQRLPPL-HSMNDYMVSRMEKKREGETELVV

Query:  FYHGGLSSPEEFNPWTSESKTLLEIMTSAENIGAKYEILYISDPVRSIRHSYMELGRFIAEGSSQNGSAKSANFCDEVCQIKSSLLEGLFVGIVLLIILI
        F HG  SSPEE NPWTSESKTL EIMTSAE++GAKYEILYISDP RSIRHSY+ELGRF+AEGSS NGSAKS + CDEVCQIKSSLLEGLFVGIVLLIIL+
Subjt:  FYHGGLSSPEEFNPWTSESKTLLEIMTSAENIGAKYEILYISDPVRSIRHSYMELGRFIAEGSSQNGSAKSANFCDEVCQIKSSLLEGLFVGIVLLIILI

Query:  SGLCCMMGIDTPTRFETPQDS
        SGLCCMMGIDTPTRFETPQDS
Subjt:  SGLCCMMGIDTPTRFETPQDS

XP_008456729.1 PREDICTED: uncharacterized protein LOC103496586 isoform X2 [Cucumis melo]

5.8e-96

83.26

Show/hide

Query:  SMHVDPNLVDLLKASFSRSNFSMAFPYVAAPERGTIENLLISEFKKSCGHDLRIDNSAF------EDESFQRLPPL-HSMNDYMVSRMEKKREGETELVV
        S HVDPNL++LLK SFSRSNFSMAFPYVAAPERG +E LLISEFK+SCGHDLRI NSAF      EDESFQ+LP L HS+NDYMVSRME K EGETELV+
Subjt:  SMHVDPNLVDLLKASFSRSNFSMAFPYVAAPERGTIENLLISEFKKSCGHDLRIDNSAF------EDESFQRLPPL-HSMNDYMVSRMEKKREGETELVV

Query:  FYHGGLSSPEEFNPWTSESKTLLEIMTSAENIGAKYEILYISDPVRSIRHSYMELGRFIAEGSSQNGSAKSANFCDEVCQIKSSLLEGLFVGIVLLIILI
        F HG  SSPEE NPWTSESKTL EIMTSAE++GAKYEILYISDP RSIRHSY+ELGRF+AEGSS NGSAKS + CDEVCQIKSSLLEGLFVGIVLLIIL+
Subjt:  FYHGGLSSPEEFNPWTSESKTLLEIMTSAENIGAKYEILYISDPVRSIRHSYMELGRFIAEGSSQNGSAKSANFCDEVCQIKSSLLEGLFVGIVLLIILI

Query:  SGLCCMMGIDTPTRFETPQDS
        SGLCCMMGIDTPTRFETPQDS
Subjt:  SGLCCMMGIDTPTRFETPQDS

XP_011656616.1 uncharacterized protein LOC101220040 isoform X2 [Cucumis sativus]

2.9e-95

82.81

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Query:  SMHVDPNLVDLLKASFSRSNFSMAFPYVAAPERGTIENLLISEFKKSCGHDLRIDNSAF------EDESFQRLPPL-HSMNDYMVSRMEKKREGETELVV
        S HVDPNL+DLLK SFSRSNFSMAFPYVAAPE+G +E LLISEFK+SCGHDLRI +SAF      EDESFQ+L  L HS+NDYMVSRME KREGETELV+
Subjt:  SMHVDPNLVDLLKASFSRSNFSMAFPYVAAPERGTIENLLISEFKKSCGHDLRIDNSAF------EDESFQRLPPL-HSMNDYMVSRMEKKREGETELVV

Query:  FYHGGLSSPEEFNPWTSESKTLLEIMTSAENIGAKYEILYISDPVRSIRHSYMELGRFIAEGSSQNGSAKSANFCDEVCQIKSSLLEGLFVGIVLLIILI
        F HG  SSPEE NPWTSESKTL EIMTSAE++GAKYEILYISDP RSIRHSY+ELGRF+AEGSS N SAKS +FCDEVCQIKSSLLEGLFVGIVLLIIL+
Subjt:  FYHGGLSSPEEFNPWTSESKTLLEIMTSAENIGAKYEILYISDPVRSIRHSYMELGRFIAEGSSQNGSAKSANFCDEVCQIKSSLLEGLFVGIVLLIILI

Query:  SGLCCMMGIDTPTRFETPQDS
        SGLCCMMGIDTPTRFETPQDS
Subjt:  SGLCCMMGIDTPTRFETPQDS

XP_038885229.1 uncharacterized protein LOC120075692 [Benincasa hispida]

1.6e-98

85.2

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Query:  MLSMHVDPNLVDLLKASFSRSNFSMAFPYVAAPERGTIENLLISEFKKSCGHDLRIDNSAF------EDESFQRLPPL-HSMNDYMVSRMEKKREGETEL
        MLS  VDPNL+DLLK SFSRSNFSMAFPYVAAPERG IE LLISEFKKSCGHDLRI NSAF      EDESFQ+LP L HS+NDYMVSRMEKK EGETEL
Subjt:  MLSMHVDPNLVDLLKASFSRSNFSMAFPYVAAPERGTIENLLISEFKKSCGHDLRIDNSAF------EDESFQRLPPL-HSMNDYMVSRMEKKREGETEL

Query:  VVFYHGGLSSPEEFNPWTSESKTLLEIMTSAENIGAKYEILYISDPVRSIRHSYMELGRFIAEGSSQNGSAKSANFCDEVCQIKSSLLEGLFVGIVLLII
        VVF HG  SSP+E NPWTSESKTLLEIMTSAE++GAKYEILYISDP RSIRHSY+ELGRF+AEGS+ NGSAKS +FCDEVCQIKSSLLEGLFVGIVLLII
Subjt:  VVFYHGGLSSPEEFNPWTSESKTLLEIMTSAENIGAKYEILYISDPVRSIRHSYMELGRFIAEGSSQNGSAKSANFCDEVCQIKSSLLEGLFVGIVLLII

Query:  LISGLCCMMGIDTPTRFETPQDS
        L+SGLCCMMGIDTPTRFETPQDS
Subjt:  LISGLCCMMGIDTPTRFETPQDS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KB93 Uncharacterized protein

1.4e-95

82.81

Show/hide

Query:  SMHVDPNLVDLLKASFSRSNFSMAFPYVAAPERGTIENLLISEFKKSCGHDLRIDNSAF------EDESFQRLPPL-HSMNDYMVSRMEKKREGETELVV
        S HVDPNL+DLLK SFSRSNFSMAFPYVAAPE+G +E LLISEFK+SCGHDLRI +SAF      EDESFQ+L  L HS+NDYMVSRME KREGETELV+
Subjt:  SMHVDPNLVDLLKASFSRSNFSMAFPYVAAPERGTIENLLISEFKKSCGHDLRIDNSAF------EDESFQRLPPL-HSMNDYMVSRMEKKREGETELVV

Query:  FYHGGLSSPEEFNPWTSESKTLLEIMTSAENIGAKYEILYISDPVRSIRHSYMELGRFIAEGSSQNGSAKSANFCDEVCQIKSSLLEGLFVGIVLLIILI
        F HG  SSPEE NPWTSESKTL EIMTSAE++GAKYEILYISDP RSIRHSY+ELGRF+AEGSS N SAKS +FCDEVCQIKSSLLEGLFVGIVLLIIL+
Subjt:  FYHGGLSSPEEFNPWTSESKTLLEIMTSAENIGAKYEILYISDPVRSIRHSYMELGRFIAEGSSQNGSAKSANFCDEVCQIKSSLLEGLFVGIVLLIILI

Query:  SGLCCMMGIDTPTRFETPQDS
        SGLCCMMGIDTPTRFETPQDS
Subjt:  SGLCCMMGIDTPTRFETPQDS

A0A1S3C3X2 uncharacterized protein LOC103496586 isoform X1

2.8e-96

83.26

Show/hide

Query:  SMHVDPNLVDLLKASFSRSNFSMAFPYVAAPERGTIENLLISEFKKSCGHDLRIDNSAF------EDESFQRLPPL-HSMNDYMVSRMEKKREGETELVV
        S HVDPNL++LLK SFSRSNFSMAFPYVAAPERG +E LLISEFK+SCGHDLRI NSAF      EDESFQ+LP L HS+NDYMVSRME K EGETELV+
Subjt:  SMHVDPNLVDLLKASFSRSNFSMAFPYVAAPERGTIENLLISEFKKSCGHDLRIDNSAF------EDESFQRLPPL-HSMNDYMVSRMEKKREGETELVV

Query:  FYHGGLSSPEEFNPWTSESKTLLEIMTSAENIGAKYEILYISDPVRSIRHSYMELGRFIAEGSSQNGSAKSANFCDEVCQIKSSLLEGLFVGIVLLIILI
        F HG  SSPEE NPWTSESKTL EIMTSAE++GAKYEILYISDP RSIRHSY+ELGRF+AEGSS NGSAKS + CDEVCQIKSSLLEGLFVGIVLLIIL+
Subjt:  FYHGGLSSPEEFNPWTSESKTLLEIMTSAENIGAKYEILYISDPVRSIRHSYMELGRFIAEGSSQNGSAKSANFCDEVCQIKSSLLEGLFVGIVLLIILI

Query:  SGLCCMMGIDTPTRFETPQDS
        SGLCCMMGIDTPTRFETPQDS
Subjt:  SGLCCMMGIDTPTRFETPQDS

A0A1S3C4L5 uncharacterized protein LOC103496586 isoform X2

2.8e-96

83.26

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Query:  SMHVDPNLVDLLKASFSRSNFSMAFPYVAAPERGTIENLLISEFKKSCGHDLRIDNSAF------EDESFQRLPPL-HSMNDYMVSRMEKKREGETELVV
        S HVDPNL++LLK SFSRSNFSMAFPYVAAPERG +E LLISEFK+SCGHDLRI NSAF      EDESFQ+LP L HS+NDYMVSRME K EGETELV+
Subjt:  SMHVDPNLVDLLKASFSRSNFSMAFPYVAAPERGTIENLLISEFKKSCGHDLRIDNSAF------EDESFQRLPPL-HSMNDYMVSRMEKKREGETELVV

Query:  FYHGGLSSPEEFNPWTSESKTLLEIMTSAENIGAKYEILYISDPVRSIRHSYMELGRFIAEGSSQNGSAKSANFCDEVCQIKSSLLEGLFVGIVLLIILI
        F HG  SSPEE NPWTSESKTL EIMTSAE++GAKYEILYISDP RSIRHSY+ELGRF+AEGSS NGSAKS + CDEVCQIKSSLLEGLFVGIVLLIIL+
Subjt:  FYHGGLSSPEEFNPWTSESKTLLEIMTSAENIGAKYEILYISDPVRSIRHSYMELGRFIAEGSSQNGSAKSANFCDEVCQIKSSLLEGLFVGIVLLIILI

Query:  SGLCCMMGIDTPTRFETPQDS
        SGLCCMMGIDTPTRFETPQDS
Subjt:  SGLCCMMGIDTPTRFETPQDS

A0A5D3BZE4 Uncharacterized protein

2.8e-96

83.26

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Query:  SMHVDPNLVDLLKASFSRSNFSMAFPYVAAPERGTIENLLISEFKKSCGHDLRIDNSAF------EDESFQRLPPL-HSMNDYMVSRMEKKREGETELVV
        S HVDPNL++LLK SFSRSNFSMAFPYVAAPERG +E LLISEFK+SCGHDLRI NSAF      EDESFQ+LP L HS+NDYMVSRME K EGETELV+
Subjt:  SMHVDPNLVDLLKASFSRSNFSMAFPYVAAPERGTIENLLISEFKKSCGHDLRIDNSAF------EDESFQRLPPL-HSMNDYMVSRMEKKREGETELVV

Query:  FYHGGLSSPEEFNPWTSESKTLLEIMTSAENIGAKYEILYISDPVRSIRHSYMELGRFIAEGSSQNGSAKSANFCDEVCQIKSSLLEGLFVGIVLLIILI
        F HG  SSPEE NPWTSESKTL EIMTSAE++GAKYEILYISDP RSIRHSY+ELGRF+AEGSS NGSAKS + CDEVCQIKSSLLEGLFVGIVLLIIL+
Subjt:  FYHGGLSSPEEFNPWTSESKTLLEIMTSAENIGAKYEILYISDPVRSIRHSYMELGRFIAEGSSQNGSAKSANFCDEVCQIKSSLLEGLFVGIVLLIILI

Query:  SGLCCMMGIDTPTRFETPQDS
        SGLCCMMGIDTPTRFETPQDS
Subjt:  SGLCCMMGIDTPTRFETPQDS

A0A6J1H415 uncharacterized protein LOC111459798

3.1e-95

81.98

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Query:  MLSMHVDPNLVDLLKASFSRSNFSMAFPYVAAPERGTIENLLISEFKKSCGHDLRIDNSAF------EDESFQRLPPLHSMNDYMVSRMEKKREGETELV
        MLS HVDPNL DLLK SFSRSNFS+AFPYVAAPE GTIEN LISEFKKSCGHDL I NSAF      EDESFQRLP  HS+NDYMVSRMEKK +GET+LV
Subjt:  MLSMHVDPNLVDLLKASFSRSNFSMAFPYVAAPERGTIENLLISEFKKSCGHDLRIDNSAF------EDESFQRLPPLHSMNDYMVSRMEKKREGETELV

Query:  VFYHGGLSSPEEFNPWTSESKTLLEIMTSAENIGAKYEILYISDPVRSIRHSYMELGRFIAEGSSQNGSAKSANFCDEVCQIKSSLLEGLFVGIVLLIIL
        VF HGG +SP+E N W SESK LLEIMTSAE++G+KYEILY+SDP RSIRH+ M+L RF+AEGSS NGS KSANFCDEVCQIKSSLLEGLFVGIVLLIIL
Subjt:  VFYHGGLSSPEEFNPWTSESKTLLEIMTSAENIGAKYEILYISDPVRSIRHSYMELGRFIAEGSSQNGSAKSANFCDEVCQIKSSLLEGLFVGIVLLIIL

Query:  ISGLCCMMGIDTPTRFETPQDS
        ISGLCCMMGIDTPTRFETPQDS
Subjt:  ISGLCCMMGIDTPTRFETPQDS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G13410.1 unknown protein

3.2e-52

49.54

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Query:  DPNLVDLLKASFSRSNFSMAFPYVAAPERGTIENLLISEFKKSCGHDLRIDNSAFEDESF------QRLPPLHSMNDYMVSRMEKKREGETELVVFYHGG
        DP LV+ L   F+ SNFS+AFPY+AAPE   +ENLL+S  K++C +++ + N  F D  F      Q+L  L S  D++++R E ++EGET+LVV    G
Subjt:  DPNLVDLLKASFSRSNFSMAFPYVAAPERGTIENLLISEFKKSCGHDLRIDNSAFEDESF------QRLPPLHSMNDYMVSRMEKKREGETELVVFYHGG

Query:  LSSPEEFNPWTSESKTLLEIMTSAENIGAKYEILYISDPVRSIRHSYMELGRFIAEGSSQNGSAKSANFCDEVCQIKSSLLEGLFVGIVLLIILISGLCC
          S  +     SE ++ LE+++S E  G+KY  LY+SDP      SY  L RF+AE +  N + + A  CDE+C+ KSSLLEG+ VGIV L+ILISGLCC
Subjt:  LSSPEEFNPWTSESKTLLEIMTSAENIGAKYEILYISDPVRSIRHSYMELGRFIAEGSSQNGSAKSANFCDEVCQIKSSLLEGLFVGIVLLIILISGLCC

Query:  MMGIDTPTRFETPQDS
        M GIDTPTRFETPQDS
Subjt:  MMGIDTPTRFETPQDS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTTGAGCATGCACGTGGATCCAAATCTTGTGGACTTACTTAAGGCCTCCTTCTCAAGGTCTAACTTCTCCATGGCATTTCCCTATGTGGCTGCACCAGAAAGGGGTAC
AATTGAAAATTTATTGATCTCAGAGTTTAAAAAATCATGTGGGCATGACCTCAGAATTGACAACAGTGCTTTTGAGGACGAATCATTCCAGAGACTTCCACCGCTGCATT
CTATGAATGATTATATGGTTTCAAGAATGGAAAAGAAGCGAGAGGGAGAGACAGAGTTGGTAGTTTTCTATCATGGAGGTCTCAGTTCTCCTGAAGAATTCAATCCATGG
ACTTCTGAAAGTAAAACTTTGTTGGAGATAATGACTTCAGCAGAGAATATCGGGGCAAAATATGAAATTCTCTATATATCAGATCCCGTTAGGTCCATTCGCCATTCTTA
TATGGAGCTGGGAAGATTTATCGCTGAAGGTTCCTCTCAAAATGGATCAGCTAAATCTGCAAATTTCTGTGATGAAGTCTGCCAAATCAAATCATCTCTTCTTGAGGGCC
TCTTTGTTGGGATCGTTCTGCTTATAATCCTAATATCAGGCCTTTGCTGTATGATGGGTATTGACACCCCAACGAGATTTGAGACACCTCAAGATTCTTAA

mRNA sequence

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Protein sequence

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MLSMHVDPNLVDLLKASFSRSNFSMAFPYVAAPERGTIENLLISEFKKSCGHDLRIDNSAFEDESFQRLPPLHSMNDYMVSRMEKKREGETELVVFYHGGLSSPEEFNPW
TSESKTLLEIMTSAENIGAKYEILYISDPVRSIRHSYMELGRFIAEGSSQNGSAKSANFCDEVCQIKSSLLEGLFVGIVLLIILISGLCCMMGIDTPTRFETPQDS

HG10011505 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome