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HG10011512 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011512
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr01:6740495..6740848
RNA-Seq ExpressionHG10011512
SyntenyHG10011512
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055854.1 uncharacterized protein E6C27_scaffold104G00300 [Cucumis melo var. makuwa]8.5e-1754.14Show/hide
Query:  MKMLGSHIFGIFTCRSNIIRSMPNPLLYQVIAS----SCP-----SLFPRR--YGKPSKEEE---GGGEKSKADRAPSTAEEFNRVAAEKEA----EEKE
        MK +G     I T RSN   +M NPL   VIAS    S P     SLFPRR  YGKP  ++E    GGE+SKA+RAPSTAEEFNR+A EKE+    EE +
Subjt:  MKMLGSHIFGIFTCRSNIIRSMPNPLLYQVIAS----SCP-----SLFPRR--YGKPSKEEE---GGGEKSKADRAPSTAEEFNRVAAEKEA----EEKE

Query:  VHDQGVAKKSEAIEKNNGPNDDINKGPNYRPCS
         HD+ V K+S  +EK++ PN+ INKGPNYRPCS
Subjt:  VHDQGVAKKSEAIEKNNGPNDDINKGPNYRPCS

KAG6596946.1 hypothetical protein SDJN03_10126, partial [Cucurbita argyrosperma subsp. sororia]6.7e-0639.52Show/hide
Query:  MKMLGSHIFGIFTCRSNIIRSMPNPLL-YQVIASSCPSLFPRRYGKPSKE--------EEGGGEKSKADRAPSTAEEFNRVAAEKEAEEKEVHDQGVAKK
        M M+GS      TCR     +  +PLL    +    PSL  RRY KP  +        E+G   +S  DRAPS AEEFNR+A EK    KE   +   K+
Subjt:  MKMLGSHIFGIFTCRSNIIRSMPNPLL-YQVIASSCPSLFPRRYGKPSKE--------EEGGGEKSKADRAPSTAEEFNRVAAEKEAEEKEVHDQGVAKK

Query:  SEAIEKNNGPNDDINKGPNYRPCS
        SE  +K    + +++ GPNYRPCS
Subjt:  SEAIEKNNGPNDDINKGPNYRPCS

KGN56105.1 hypothetical protein Csa_009481 [Cucumis sativus]5.0e-1750.72Show/hide
Query:  MKMKMLGSHIFGIFTCRSNIIRSMPNPLLYQVIASSC-----------PSLFPRRYGKPSKE--EEGGGEKSKADRAPSTAEEFNRVAAEKEAEEKE---
        +KMK +G  IF    CRSN   +M     +Q++AS             PSLFPRRYGKPSK+  E  GGE+SKA+RAPSTAEEFNR+A EK++++ +   
Subjt:  MKMKMLGSHIFGIFTCRSNIIRSMPNPLLYQVIASSC-----------PSLFPRRYGKPSKE--EEGGGEKSKADRAPSTAEEFNRVAAEKEAEEKE---

Query:  ---VHDQG-VAKKSE-AIEKNNGPNDDINKGPNYRPCS
           VH +   AK+SE A+EK++ PN+ INKGPNYRPCS
Subjt:  ---VHDQG-VAKKSE-AIEKNNGPNDDINKGPNYRPCS

XP_016900655.1 PREDICTED: uncharacterized protein LOC107990980 isoform X1 [Cucumis melo]8.5e-1753.73Show/hide
Query:  MKMKMLGSHIFGIFTCRSNIIRSMPNPLLYQVIAS----SCP-----SLFPRR-YGKPSKEEE---GGGEKSKADRAPSTAEEFNRVAAEKEA----EEK
        +KMK +G     I T RSN   +M NPL   VIAS    S P     SLFPRR YGKP  ++E    GGE+SKA+RAPSTAEEFNR+A EKE+    EE 
Subjt:  MKMKMLGSHIFGIFTCRSNIIRSMPNPLLYQVIAS----SCP-----SLFPRR-YGKPSKEEE---GGGEKSKADRAPSTAEEFNRVAAEKEA----EEK

Query:  EVHDQGVAKKSEAIEKNNGPNDDINKGPNYRPCS
        + HD+ V K+S  + K++ PN+ INKGPNYRPCS
Subjt:  EVHDQGVAKKSEAIEKNNGPNDDINKGPNYRPCS

XP_016900656.1 PREDICTED: uncharacterized protein LOC107990980 isoform X2 [Cucumis melo]5.7e-1360.92Show/hide
Query:  SLFPRR-YGKPSKEEE---GGGEKSKADRAPSTAEEFNRVAAEKEA----EEKEVHDQGVAKKSEAIEKNNGPNDDINKGPNYRPCS
        SLFPRR YGKP  ++E    GGE+SKA+RAPSTAEEFNR+A EKE+    EE + HD+ V K+S  + K++ PN+ INKGPNYRPCS
Subjt:  SLFPRR-YGKPSKEEE---GGGEKSKADRAPSTAEEFNRVAAEKEA----EEKEVHDQGVAKKSEAIEKNNGPNDDINKGPNYRPCS

TrEMBL top hitse value%identityAlignment
A0A0A0L2C8 Uncharacterized protein2.4e-1750.72Show/hide
Query:  MKMKMLGSHIFGIFTCRSNIIRSMPNPLLYQVIASSC-----------PSLFPRRYGKPSKE--EEGGGEKSKADRAPSTAEEFNRVAAEKEAEEKE---
        +KMK +G  IF    CRSN   +M     +Q++AS             PSLFPRRYGKPSK+  E  GGE+SKA+RAPSTAEEFNR+A EK++++ +   
Subjt:  MKMKMLGSHIFGIFTCRSNIIRSMPNPLLYQVIASSC-----------PSLFPRRYGKPSKE--EEGGGEKSKADRAPSTAEEFNRVAAEKEAEEKE---

Query:  ---VHDQG-VAKKSE-AIEKNNGPNDDINKGPNYRPCS
           VH +   AK+SE A+EK++ PN+ INKGPNYRPCS
Subjt:  ---VHDQG-VAKKSE-AIEKNNGPNDDINKGPNYRPCS

A0A1S4DXE7 uncharacterized protein LOC107990980 isoform X22.7e-1360.92Show/hide
Query:  SLFPRR-YGKPSKEEE---GGGEKSKADRAPSTAEEFNRVAAEKEA----EEKEVHDQGVAKKSEAIEKNNGPNDDINKGPNYRPCS
        SLFPRR YGKP  ++E    GGE+SKA+RAPSTAEEFNR+A EKE+    EE + HD+ V K+S  + K++ PN+ INKGPNYRPCS
Subjt:  SLFPRR-YGKPSKEEE---GGGEKSKADRAPSTAEEFNRVAAEKEA----EEKEVHDQGVAKKSEAIEKNNGPNDDINKGPNYRPCS

A0A1S4DY64 uncharacterized protein LOC107990980 isoform X14.1e-1753.73Show/hide
Query:  MKMKMLGSHIFGIFTCRSNIIRSMPNPLLYQVIAS----SCP-----SLFPRR-YGKPSKEEE---GGGEKSKADRAPSTAEEFNRVAAEKEA----EEK
        +KMK +G     I T RSN   +M NPL   VIAS    S P     SLFPRR YGKP  ++E    GGE+SKA+RAPSTAEEFNR+A EKE+    EE 
Subjt:  MKMKMLGSHIFGIFTCRSNIIRSMPNPLLYQVIAS----SCP-----SLFPRR-YGKPSKEEE---GGGEKSKADRAPSTAEEFNRVAAEKEA----EEK

Query:  EVHDQGVAKKSEAIEKNNGPNDDINKGPNYRPCS
        + HD+ V K+S  + K++ PN+ INKGPNYRPCS
Subjt:  EVHDQGVAKKSEAIEKNNGPNDDINKGPNYRPCS

A0A5A7UKZ4 Uncharacterized protein4.1e-1754.14Show/hide
Query:  MKMLGSHIFGIFTCRSNIIRSMPNPLLYQVIAS----SCP-----SLFPRR--YGKPSKEEE---GGGEKSKADRAPSTAEEFNRVAAEKEA----EEKE
        MK +G     I T RSN   +M NPL   VIAS    S P     SLFPRR  YGKP  ++E    GGE+SKA+RAPSTAEEFNR+A EKE+    EE +
Subjt:  MKMLGSHIFGIFTCRSNIIRSMPNPLLYQVIAS----SCP-----SLFPRR--YGKPSKEEE---GGGEKSKADRAPSTAEEFNRVAAEKEA----EEKE

Query:  VHDQGVAKKSEAIEKNNGPNDDINKGPNYRPCS
         HD+ V K+S  +EK++ PN+ INKGPNYRPCS
Subjt:  VHDQGVAKKSEAIEKNNGPNDDINKGPNYRPCS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATGAAGATGTTGGGTAGCCATATCTTTGGTATCTTCACTTGTAGAAGCAATATTATTAGGTCCATGCCAAATCCATTATTATACCAAGTCATTGCTTCTAGCTG
CCCATCTCTTTTTCCTCGGCGTTATGGCAAACCAAGTAAAGAGGAGGAGGGCGGCGGCGAGAAATCTAAGGCTGACCGAGCTCCGTCGACTGCGGAGGAGTTCAATAGAG
TGGCGGCTGAAAAGGAGGCGGAGGAGAAGGAGGTGCATGATCAGGGCGTCGCCAAAAAATCTGAAGCCATAGAAAAAAATAATGGCCCTAATGACGACATAAATAAAGGG
CCTAATTACCGGCCTTGTAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATGAAGATGTTGGGTAGCCATATCTTTGGTATCTTCACTTGTAGAAGCAATATTATTAGGTCCATGCCAAATCCATTATTATACCAAGTCATTGCTTCTAGCTG
CCCATCTCTTTTTCCTCGGCGTTATGGCAAACCAAGTAAAGAGGAGGAGGGCGGCGGCGAGAAATCTAAGGCTGACCGAGCTCCGTCGACTGCGGAGGAGTTCAATAGAG
TGGCGGCTGAAAAGGAGGCGGAGGAGAAGGAGGTGCATGATCAGGGCGTCGCCAAAAAATCTGAAGCCATAGAAAAAAATAATGGCCCTAATGACGACATAAATAAAGGG
CCTAATTACCGGCCTTGTAGCTGA
Protein sequenceShow/hide protein sequence
MKMKMLGSHIFGIFTCRSNIIRSMPNPLLYQVIASSCPSLFPRRYGKPSKEEEGGGEKSKADRAPSTAEEFNRVAAEKEAEEKEVHDQGVAKKSEAIEKNNGPNDDINKG
PNYRPCS