; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10011538 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011538
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
Genome locationChr01:6981593..6985403
RNA-Seq ExpressionHG10011538
SyntenyHG10011538
Gene Ontology termsGO:0032981 - mitochondrial respiratory chain complex I assembly (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0070469 - respirasome (cellular component)
InterPro domainsIPR007763 - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033972.1 NDUFA12 domain-containing protein [Cucumis melo var. makuwa]8.4e-6277.44Show/hide
Query:  MSKLFGKIAGFFSNRTMVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVRQNVAQEPISFSFF
        MSKLFGKIAGFFSNRT+VGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEM+ELEARRERVRQNVA         
Subjt:  MSKLFGKIAGFFSNRTMVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVRQNVAQEPISFSFF

Query:  DLTWSYWKLSVINLVLKKEEMERNSKEGNLRKVINTGQVAGPNLKSFIRQFPTGSEGPPSPLGL
                      +LKKEEMERNSKEG LRK+I+TGQV GP+LKSFIRQ PTGSEG     GL
Subjt:  DLTWSYWKLSVINLVLKKEEMERNSKEGNLRKVINTGQVAGPNLKSFIRQFPTGSEGPPSPLGL

TYK02574.1 NDUFA12 domain-containing protein [Cucumis melo var. makuwa]1.8e-6772.54Show/hide
Query:  MSKLFGKIAGFFSNRTMVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVRQNVAQEPISFSFF
        MSKLFGKIAGFFSNRT+VGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEM+ELEARRERVRQNVA         
Subjt:  MSKLFGKIAGFFSNRTMVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVRQNVAQEPISFSFF

Query:  DLTWSYWKLSVINLVLKKEEMERNSKEGNLRKVINTGQVAGPNLKSFIRQFPTGSEG---------------PPSPLGLAKHLDQEHGSHQHE
                      +LKKEEMERNSKEG LRK+I+TGQV GP+LKSFIRQ PTGSEG               PPS LGLA HLD EHGSH ++
Subjt:  DLTWSYWKLSVINLVLKKEEMERNSKEGNLRKVINTGQVAGPNLKSFIRQFPTGSEG---------------PPSPLGLAKHLDQEHGSHQHE

XP_031738721.1 uncharacterized protein LOC101214441 isoform X1 [Cucumis sativus]1.8e-6462.28Show/hide
Query:  MSKLFGKIAGFFSNRTMVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVRQNVAQEPISFSFF
        MSKLFGKIA FFSNRT+VGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWICWLNGQRKKAPTPEEM ELEARRERVRQNVA         
Subjt:  MSKLFGKIAGFFSNRTMVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVRQNVAQEPISFSFF

Query:  DLTWSYWKLSVINLVLKKEEMERNSKEGNLRKVINTGQVAGPNLKSFIRQFPTGSE--------------------------------------------
                      +LKKEEMERNSKEGNLRK+I+TGQV GP+LKSFIRQ PTGSE                                            
Subjt:  DLTWSYWKLSVINLVLKKEEMERNSKEGNLRKVINTGQVAGPNLKSFIRQFPTGSE--------------------------------------------

Query:  ------GPPSPLGLAKHLDQEHGSHQHE
              GPPS LGLA HL+QEHGSHQHE
Subjt:  ------GPPSPLGLAKHLDQEHGSHQHE

XP_038903173.1 uncharacterized protein LOC120089839 isoform X1 [Benincasa hispida]3.1e-6474.44Show/hide
Query:  MSKLFGKIAGFFSNRTMVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVRQNVAQEPISFSFF
        MSKLFGKIAGFFSNRT+VGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEM+ELEARRERVRQNVA         
Subjt:  MSKLFGKIAGFFSNRTMVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVRQNVAQEPISFSFF

Query:  DLTWSYWKLSVINLVLKKEEMERNSKEGNLRKVINTGQVAGPNLKSFIRQFPTGSEGPPSPLGLAKHLDQEHGSHQHECV
                      +LKKEEMERNSKEGNLRK+I+TGQVAGP+LKSFIRQFPTGSEG     GL    D    S++ E V
Subjt:  DLTWSYWKLSVINLVLKKEEMERNSKEGNLRKVINTGQVAGPNLKSFIRQFPTGSEGPPSPLGLAKHLDQEHGSHQHECV

XP_038903174.1 uncharacterized protein LOC120089839 isoform X2 [Benincasa hispida]3.1e-6474.44Show/hide
Query:  MSKLFGKIAGFFSNRTMVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVRQNVAQEPISFSFF
        MSKLFGKIAGFFSNRT+VGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEM+ELEARRERVRQNVA         
Subjt:  MSKLFGKIAGFFSNRTMVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVRQNVAQEPISFSFF

Query:  DLTWSYWKLSVINLVLKKEEMERNSKEGNLRKVINTGQVAGPNLKSFIRQFPTGSEGPPSPLGLAKHLDQEHGSHQHECV
                      +LKKEEMERNSKEGNLRK+I+TGQVAGP+LKSFIRQFPTGSEG     GL    D    S++ E V
Subjt:  DLTWSYWKLSVINLVLKKEEMERNSKEGNLRKVINTGQVAGPNLKSFIRQFPTGSEGPPSPLGLAKHLDQEHGSHQHECV

TrEMBL top hitse value%identityAlignment
A0A0A0L526 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 122.6e-6176.83Show/hide
Query:  MSKLFGKIAGFFSNRTMVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVRQNVAQEPISFSFF
        MSKLFGKIA FFSNRT+VGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWICWLNGQRKKAPTPEEM ELEARRERVRQNVA         
Subjt:  MSKLFGKIAGFFSNRTMVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVRQNVAQEPISFSFF

Query:  DLTWSYWKLSVINLVLKKEEMERNSKEGNLRKVINTGQVAGPNLKSFIRQFPTGSEGPPSPLGL
                      +LKKEEMERNSKEGNLRK+I+TGQV GP+LKSFIRQ PTGSEG     GL
Subjt:  DLTWSYWKLSVINLVLKKEEMERNSKEGNLRKVINTGQVAGPNLKSFIRQFPTGSEGPPSPLGL

A0A5A7SS01 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 124.1e-6277.44Show/hide
Query:  MSKLFGKIAGFFSNRTMVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVRQNVAQEPISFSFF
        MSKLFGKIAGFFSNRT+VGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEM+ELEARRERVRQNVA         
Subjt:  MSKLFGKIAGFFSNRTMVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVRQNVAQEPISFSFF

Query:  DLTWSYWKLSVINLVLKKEEMERNSKEGNLRKVINTGQVAGPNLKSFIRQFPTGSEGPPSPLGL
                      +LKKEEMERNSKEG LRK+I+TGQV GP+LKSFIRQ PTGSEG     GL
Subjt:  DLTWSYWKLSVINLVLKKEEMERNSKEGNLRKVINTGQVAGPNLKSFIRQFPTGSEGPPSPLGL

A0A5D3BTS9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 128.5e-6872.54Show/hide
Query:  MSKLFGKIAGFFSNRTMVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVRQNVAQEPISFSFF
        MSKLFGKIAGFFSNRT+VGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEM+ELEARRERVRQNVA         
Subjt:  MSKLFGKIAGFFSNRTMVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVRQNVAQEPISFSFF

Query:  DLTWSYWKLSVINLVLKKEEMERNSKEGNLRKVINTGQVAGPNLKSFIRQFPTGSEG---------------PPSPLGLAKHLDQEHGSHQHE
                      +LKKEEMERNSKEG LRK+I+TGQV GP+LKSFIRQ PTGSEG               PPS LGLA HLD EHGSH ++
Subjt:  DLTWSYWKLSVINLVLKKEEMERNSKEGNLRKVINTGQVAGPNLKSFIRQFPTGSEG---------------PPSPLGLAKHLDQEHGSHQHE

A0A6J1DNE9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 126.1e-5872.12Show/hide
Query:  MSKLFGKIAGFFSNRTMVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVRQNVAQEPISFSFF
        MSKLFGKIA FFS+RTM GVDK+GN+YFF KEEIDG+MKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEM+ELEARRERVRQNV          
Subjt:  MSKLFGKIAGFFSNRTMVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVRQNVAQEPISFSFF

Query:  DLTWSYWKLSVINLVLKKEEMERNSKEGNLRKVINTGQVAGPNLKSFIRQFPTGSEGPPSPLGLA
                      +LKK+EMERNS+EGNLRKVI+  QVAGP+L SFIRQFPTGSEG     G A
Subjt:  DLTWSYWKLSVINLVLKKEEMERNSKEGNLRKVINTGQVAGPNLKSFIRQFPTGSEGPPSPLGLA

A0A6J1JVV8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 124.7e-5870.79Show/hide
Query:  MSKLFGKIAGFFSNRTMVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVRQNVAQEPISFSFF
        MSKLF KIAGFF++RT++GVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEM+ELEARRERVRQNVA         
Subjt:  MSKLFGKIAGFFSNRTMVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVRQNVAQEPISFSFF

Query:  DLTWSYWKLSVINLVLKKEEMERNSKEGNLRKVINTGQVAGPNLKSFIRQFPTGSEGPPSPLGLAKHLDQEHGSHQHE
                      +LKKEEMER SKE NLRKV++T  VAGPNLKSFIRQFPTGSEG     G A   D    S ++E
Subjt:  DLTWSYWKLSVINLVLKKEEMERNSKEGNLRKVINTGQVAGPNLKSFIRQFPTGSEGPPSPLGLAKHLDQEHGSHQHE

SwissProt top hitse value%identityAlignment
Q54MV7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 124.4e-0531.15Show/hide
Query:  TMVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKG--EDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRER------VRQNVAQEPISFSFFDLTWSYW
        T+VGVDK GNRY+  ++EI G     RWV +     +DPT+IP E+  W++    K P+  EM+      +R         + A  P +F F        
Subjt:  TMVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKG--EDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRER------VRQNVAQEPISFSFFDLTWSYW

Query:  KLSVINLVLKKEEMERNSKEGN
             N+   KEE+++  K  N
Subjt:  KLSVINLVLKKEEMERNSKEGN

Q59J78 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 26.4e-0433.75Show/hide
Query:  RTMVGVDKAGNRYFFVKEEID---GIMKEKRWVVFKG----EDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVR
        R  VG D  GN+Y++V E  +     ++EKR V        + +   IP EW  W+   RK  PT EE+++ E  RE ++
Subjt:  RTMVGVDKAGNRYFFVKEEID---GIMKEKRWVVFKG----EDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVR

Q8N183 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 28.3e-0432.47Show/hide
Query:  VGVDKAGNRYFFV---KEEIDGIMKEKRWVVFKGED----DPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVR
        VG D+ GN+Y+++   K      ++EKR V    +     +   IP EW  W+   RK  PT EE+++ E  RE ++
Subjt:  VGVDKAGNRYFFV---KEEIDGIMKEKRWVVFKGED----DPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVR

Arabidopsis top hitse value%identityAlignment
AT4G26965.1 NADH:ubiquinone oxidoreductase, 17.2kDa subunit8.4e-4450.52Show/hide
Query:  MSKLFGKIAGFFSNRTMVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVRQNVAQEPISFSFF
        MS+L+ + AG FS+++ +GVDK GN+YF   EEIDG +KEKRWV F+ E+DPTSIPVEWICWLNGQRK+APTPEEMIELEARRERV+ NVA         
Subjt:  MSKLFGKIAGFFSNRTMVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVRQNVAQEPISFSFF

Query:  DLTWSYWKLSVINLVLKKEEMERNSKEGNLRKVINTGQVAGPNLKSFIRQFPTGSEGPPSPLGLAKHLDQEHG-SHQHECVIALQRELTNTKAS
                      +LKKEE E+ ++ G  RK I  G+V GP+L SF+RQFP  S+G   P   ++  D+     H+ E V A   E   T+ S
Subjt:  DLTWSYWKLSVINLVLKKEEMERNSKEGNLRKVINTGQVAGPNLKSFIRQFPTGSEGPPSPLGLAKHLDQEHG-SHQHECVIALQRELTNTKAS

AT4G26965.2 NADH:ubiquinone oxidoreductase, 17.2kDa subunit3.7e-3150.32Show/hide
Query:  MKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVRQNVAQEPISFSFFDLTWSYWKLSVINLVLKKEEMERNSKEGNLRKVINTG
        MKEKRWV F+ E+DPTSIPVEWICWLNGQRK+APTPEEMIELEARRERV+ NVA                       +LKKEE E+ ++ G  RK I  G
Subjt:  MKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVRQNVAQEPISFSFFDLTWSYWKLSVINLVLKKEEMERNSKEGNLRKVINTG

Query:  QVAGPNLKSFIRQFPTGSEGPPSPLGLAKHLDQEHG-SHQHECVIALQRELTNTKAS
        +V GP+L SF+RQFP  S+G   P   ++  D+     H+ E V A   E   T+ S
Subjt:  QVAGPNLKSFIRQFPTGSEGPPSPLGLAKHLDQEHG-SHQHECVIALQRELTNTKAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAACTTTTCGGGAAAATTGCCGGTTTCTTCAGCAATAGAACTATGGTGGGAGTGGACAAAGCGGGAAACAGATACTTCTTTGTAAAAGAAGAAATCGATGGTAT
AATGAAAGAGAAGAGATGGGTGGTATTTAAGGGTGAGGATGATCCAACGTCAATTCCAGTGGAATGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAG
AGGAAATGATTGAGCTAGAAGCTAGGCGTGAACGTGTACGACAAAATGTTGCTCAAGAACCAATATCATTCTCATTCTTTGACTTAACATGGTCTTATTGGAAGTTATCT
GTGATCAATTTAGTTCTCAAGAAAGAAGAGATGGAAAGAAACTCAAAAGAAGGCAATTTACGGAAAGTCATCAACACTGGTCAAGTTGCAGGTCCCAACTTGAAAAGCTT
TATTCGACAGTTCCCAACAGGTTCAGAAGGTCCTCCGAGCCCGTTGGGTCTGGCCAAACATTTAGACCAGGAACATGGCAGCCACCAACATGAATGCGTGATTGCCCTTC
AAAGAGAACTCACCAACACTAAAGCTAGCAGTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAAACTTTTCGGGAAAATTGCCGGTTTCTTCAGCAATAGAACTATGGTGGGAGTGGACAAAGCGGGAAACAGATACTTCTTTGTAAAAGAAGAAATCGATGGTAT
AATGAAAGAGAAGAGATGGGTGGTATTTAAGGGTGAGGATGATCCAACGTCAATTCCAGTGGAATGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAG
AGGAAATGATTGAGCTAGAAGCTAGGCGTGAACGTGTACGACAAAATGTTGCTCAAGAACCAATATCATTCTCATTCTTTGACTTAACATGGTCTTATTGGAAGTTATCT
GTGATCAATTTAGTTCTCAAGAAAGAAGAGATGGAAAGAAACTCAAAAGAAGGCAATTTACGGAAAGTCATCAACACTGGTCAAGTTGCAGGTCCCAACTTGAAAAGCTT
TATTCGACAGTTCCCAACAGGTTCAGAAGGTCCTCCGAGCCCGTTGGGTCTGGCCAAACATTTAGACCAGGAACATGGCAGCCACCAACATGAATGCGTGATTGCCCTTC
AAAGAGAACTCACCAACACTAAAGCTAGCAGTTTGTGA
Protein sequenceShow/hide protein sequence
MSKLFGKIAGFFSNRTMVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMIELEARRERVRQNVAQEPISFSFFDLTWSYWKLS
VINLVLKKEEMERNSKEGNLRKVINTGQVAGPNLKSFIRQFPTGSEGPPSPLGLAKHLDQEHGSHQHECVIALQRELTNTKASSL