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HG10011541 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011541
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionDBD_Tnp_Mut domain-containing protein
Genome locationChr01:7015360..7015698
RNA-Seq ExpressionHG10011541
SyntenyHG10011541
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7126704.1 hypothetical protein RHSIM_Rhsim11G0188900 [Rhododendron simsii]1.1e-0836.17Show/hide
Query:  LNHGGKVEKSPYRYVGGLKLTFDKIDPDLWSLLELFDLVKSLGYSEWENLWY-----EGVDGSFNILDSDKASMELASLGVLNRNASINVYVEH
        ++HGG   ++P RYV G+    + +D D WS LE+ ++V +LGY++W+N+WY     E   G   ++  D  +M++AS        +I VYVEH
Subjt:  LNHGGKVEKSPYRYVGGLKLTFDKIDPDLWSLLELFDLVKSLGYSEWENLWY-----EGVDGSFNILDSDKASMELASLGVLNRNASINVYVEH

KAF7138490.1 hypothetical protein RHSIM_Rhsim07G0255600 [Rhododendron simsii]1.4e-0834.69Show/hide
Query:  FSIILNHGGKVEKSPYRYVGGLKLTFDKIDPDLWSLLELFDLVKSLGYSEWENLWYE----GVDGSFNILDSDKASMELASLGVLNRNASINVYVEHV
        F++ ++H G+  ++P RYV G+    D  DPDL S LE+ D+V+ LGY +++ LWY     G++    ++++DK +M +  + V+  +  I +YVEH+
Subjt:  FSIILNHGGKVEKSPYRYVGGLKLTFDKIDPDLWSLLELFDLVKSLGYSEWENLWYE----GVDGSFNILDSDKASMELASLGVLNRNASINVYVEHV

KAF7140119.1 hypothetical protein RHSIM_Rhsim06G0115000 [Rhododendron simsii]9.6e-1036Show/hide
Query:  EEFSIILNHGGKVEKSPYRYVGGLKLTFDKIDPDLWSLLELFDLVKSLGYSEWENLWYE----GVDGSFNILDSDKASMELASLGVLNRNASINVYVEHV
        +EF++ ++H G   + P RYVGG     D  + D WS LE+ D+V+ LGY++++ LWY     G++    ++ +DK +M++A+   +  +  I VYVEHV
Subjt:  EEFSIILNHGGKVEKSPYRYVGGLKLTFDKIDPDLWSLLELFDLVKSLGYSEWENLWYE----GVDGSFNILDSDKASMELASLGVLNRNASINVYVEHV

KAF7143453.1 hypothetical protein RHSIM_Rhsim05G0009400 [Rhododendron simsii]1.3e-0936Show/hide
Query:  EEFSIILNHGGKVEKSPYRYVGGLKLTFDKIDPDLWSLLELFDLVKSLGYSEWENLWYE----GVDGSFNILDSDKASMELASLGVLNRNASINVYVEHV
        +EF++ ++H G   + P RYVGG     D  + D WS LE+ D+V+ LGY++++ LWY     G++    ++ +DK +M++A+   +  +  I VYVEHV
Subjt:  EEFSIILNHGGKVEKSPYRYVGGLKLTFDKIDPDLWSLLELFDLVKSLGYSEWENLWYE----GVDGSFNILDSDKASMELASLGVLNRNASINVYVEHV

KAG5541483.1 hypothetical protein RHGRI_021341 [Rhododendron griersonianum]6.2e-0934.69Show/hide
Query:  FSIILNHGGKVEKSPYRYVGGLKLTFDKIDPDLWSLLELFDLVKSLGYSEWENLWY-----EGVDGSFNILDSDKASMELASLGVLNRNASINVYVEH
        F++ ++HGG   ++P RYV G+    + +D D WS LE+ +++ +LGY++W+N+WY     E   G   ++  D  +M++AS        +I VYVEH
Subjt:  FSIILNHGGKVEKSPYRYVGGLKLTFDKIDPDLWSLLELFDLVKSLGYSEWENLWY-----EGVDGSFNILDSDKASMELASLGVLNRNASINVYVEH

TrEMBL top hitse value%identityAlignment
A0A2N9FZN2 SPOC domain-containing protein1.6e-0733.33Show/hide
Query:  FSIILNHGGKVEKSPYRYVGGLKLTFDKIDPDLWSLLELFDLVKSLGYSEWENLWYE--GV---DGSFNILDSDKASMELASLGVLNRNASINVYVEHVR
        FS++L HG     +   Y G +K  FDK DP+ WS +E+ ++V++LGY+    LWY   G+   DG  ++++SD  +M +  L  +     I V+VEH+ 
Subjt:  FSIILNHGGKVEKSPYRYVGGLKLTFDKIDPDLWSLLELFDLVKSLGYSEWENLWYE--GV---DGSFNILDSDKASMELASLGVLNRNASINVYVEHVR

Query:  NDDVNTMHIHD
         + V    + D
Subjt:  NDDVNTMHIHD

A0A3Q0F855 uncharacterized protein LOC1112420132.5e-0837Show/hide
Query:  EEFSIILNHGGK-VEKSPYRYVGGLKLTFDKIDPDLWSLLELFDLVKSLGYSEWENLWYEGVDGSFNILDSDKASMELASLGVLNRNASINVYVEHVRND
        E F+++++HGG  V + P  YVGG K T+  +DPD WS  E  D+VK LGY    +++Y   D     L+ DK++M +  +G++ R   + +YV H  +D
Subjt:  EEFSIILNHGGK-VEKSPYRYVGGLKLTFDKIDPDLWSLLELFDLVKSLGYSEWENLWYEGVDGSFNILDSDKASMELASLGVLNRNASINVYVEHVRND

A0A6A4LGM1 DBD_Tnp_Mut domain-containing protein (Fragment)1.3e-0735.37Show/hide
Query:  FSIILNHGGKVEKSPYRYVGGLKLTFDKIDPDLWSLLELFDLVKSLGYSEWENLWY-----EGVDGSFNILDSDKASMELAS
        F++ ++HGG   ++P RYV G+    + +D D WS LE+ ++V +LGY++W+N+WY     E   G   ++  D  +M++AS
Subjt:  FSIILNHGGKVEKSPYRYVGGLKLTFDKIDPDLWSLLELFDLVKSLGYSEWENLWY-----EGVDGSFNILDSDKASMELAS

A0A6A4LGV3 DBD_Tnp_Mut domain-containing protein (Fragment)2.5e-0837.35Show/hide
Query:  EEFSIILNHGGKVEKSPYRYVGGLKLTFDKIDPDLWSLLELFDLVKSLGYSEWENLWYE----GVDGSFNILDSDKASMELAS
        EEF+I ++H G   + P RYVGG     D  + D WS LE+ D+V+ LGY++++ LWY     G++    ++ +DK +M++A+
Subjt:  EEFSIILNHGGKVEKSPYRYVGGLKLTFDKIDPDLWSLLELFDLVKSLGYSEWENLWYE----GVDGSFNILDSDKASMELAS

A0A6A4M1H5 DBD_Tnp_Mut domain-containing protein (Fragment)2.5e-0835.48Show/hide
Query:  LNHGGKVEKSPYRYVGGLKLTFDKIDPDLWSLLELFDLVKSLGYSEWENLWYE----GVDGSFNILDSDKASMELASLGVLNRNASINVYVEH
        ++H G+  ++P RYV G+    D  DPDLWS LE+ D+V+ LGY  ++ LWY     G++    ++ +DK +M +    V+  +  I ++VEH
Subjt:  LNHGGKVEKSPYRYVGGLKLTFDKIDPDLWSLLELFDLVKSLGYSEWENLWYE----GVDGSFNILDSDKASMELASLGVLNRNASINVYVEH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAATTTAGTATAATTCTAAACCATGGTGGCAAAGTAGAAAAGAGTCCCTACAGATATGTAGGAGGTTTGAAATTGACTTTTGATAAAATTGACCCTGACTTGTG
GTCTTTGTTGGAATTGTTTGACTTAGTTAAGTCCTTAGGGTATAGTGAATGGGAAAATTTGTGGTATGAAGGTGTTGATGGCTCCTTTAATATATTAGACTCAGATAAAG
CATCAATGGAATTGGCTTCTTTAGGTGTATTAAATAGAAATGCATCTATAAATGTATATGTAGAGCATGTACGGAATGACGATGTTAATACAATGCATATACATGATGAT
CGAAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAATTTAGTATAATTCTAAACCATGGTGGCAAAGTAGAAAAGAGTCCCTACAGATATGTAGGAGGTTTGAAATTGACTTTTGATAAAATTGACCCTGACTTGTG
GTCTTTGTTGGAATTGTTTGACTTAGTTAAGTCCTTAGGGTATAGTGAATGGGAAAATTTGTGGTATGAAGGTGTTGATGGCTCCTTTAATATATTAGACTCAGATAAAG
CATCAATGGAATTGGCTTCTTTAGGTGTATTAAATAGAAATGCATCTATAAATGTATATGTAGAGCATGTACGGAATGACGATGTTAATACAATGCATATACATGATGAT
CGAAGTTAG
Protein sequenceShow/hide protein sequence
MEEFSIILNHGGKVEKSPYRYVGGLKLTFDKIDPDLWSLLELFDLVKSLGYSEWENLWYEGVDGSFNILDSDKASMELASLGVLNRNASINVYVEHVRNDDVNTMHIHDD
RS