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HG10011559 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011559
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr01:7176391..7176681
RNA-Seq ExpressionHG10011559
SyntenyHG10011559
Gene Ontology termsGO:0010089 - xylem development (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600765.1 hypothetical protein SDJN03_05998, partial [Cucurbita argyrosperma subsp. sororia]7.1e-1469.62Show/hide
Query:  MGQLSSKQKKKQR-------AMINQTKQKGKGSDEDNGEVEDRIIEVGFMGRDNKNYCSTGLKNIGLCLVPLSMALNYF
        M  LSSKQKK+Q+       AMINQTK KGK   E+ GEVEDR IEVGF+GRDN   CSTGLKNIGLCLVP+SMA+NYF
Subjt:  MGQLSSKQKKKQR-------AMINQTKQKGKGSDEDNGEVEDRIIEVGFMGRDNKNYCSTGLKNIGLCLVPLSMALNYF

KAG7031402.1 hypothetical protein SDJN02_05442, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-1471.43Show/hide
Query:  MGQLSSKQKKKQR-----AMINQTKQKGKGSDEDNGEVEDRIIEVGFMGRDNKNYCSTGLKNIGLCLVPLSMALNYF
        M  LSSKQKK+Q+     AMINQTK KGK   E+ GEVEDR IEVGF+GRDN   CSTGLKNIGLCLVP+SMA+NYF
Subjt:  MGQLSSKQKKKQR-----AMINQTKQKGKGSDEDNGEVEDRIIEVGFMGRDNKNYCSTGLKNIGLCLVPLSMALNYF

XP_008463437.1 PREDICTED: uncharacterized protein LOC103501601 [Cucumis melo]2.7e-2182.43Show/hide
Query:  MGQLSSKQKKKQRAMINQTKQKGKGSDEDNGEVEDRIIEVGFMGRD-NKNYCSTGLKNIGLCLVPLSMALNYFA
        M + SSKQ+KKQRA INQTK KGKGS ED GEVEDRII+VG +GRD NKNYCSTGLKNIGLCLVP+SMALNYFA
Subjt:  MGQLSSKQKKKQRAMINQTKQKGKGSDEDNGEVEDRIIEVGFMGRD-NKNYCSTGLKNIGLCLVPLSMALNYFA

XP_011652737.2 uncharacterized protein LOC105435073 [Cucumis sativus]3.5e-2181.08Show/hide
Query:  MGQLSSKQKKKQRAMINQTKQKGKGSDEDNGEVEDRIIEVGFMGRD-NKNYCSTGLKNIGLCLVPLSMALNYFA
        M + SSKQ+KKQRAM+NQTK KG GS ED GEVEDRI EVGF+GRD NKN+CSTGLKNIGLCLVP+SMALNYFA
Subjt:  MGQLSSKQKKKQRAMINQTKQKGKGSDEDNGEVEDRIIEVGFMGRD-NKNYCSTGLKNIGLCLVPLSMALNYFA

XP_022989755.1 uncharacterized protein LOC111486825 [Cucurbita maxima]7.1e-1471.05Show/hide
Query:  MGQLSSKQKKKQR----AMINQTKQKGKGSDEDNGEVEDRIIEVGFMGRDNKNYCSTGLKNIGLCLVPLSMALNYF
        M  LSSKQKK+Q+    AMINQTK +GK   E+ GEVEDR IEVGF+GRDN   CSTGLKNIGLCLVP+SMA+NYF
Subjt:  MGQLSSKQKKKQR----AMINQTKQKGKGSDEDNGEVEDRIIEVGFMGRDNKNYCSTGLKNIGLCLVPLSMALNYF

TrEMBL top hitse value%identityAlignment
A0A0A0L2F7 Uncharacterized protein1.7e-2181.08Show/hide
Query:  MGQLSSKQKKKQRAMINQTKQKGKGSDEDNGEVEDRIIEVGFMGRD-NKNYCSTGLKNIGLCLVPLSMALNYFA
        M + SSKQ+KKQRAM+NQTK KG GS ED GEVEDRI EVGF+GRD NKN+CSTGLKNIGLCLVP+SMALNYFA
Subjt:  MGQLSSKQKKKQRAMINQTKQKGKGSDEDNGEVEDRIIEVGFMGRD-NKNYCSTGLKNIGLCLVPLSMALNYFA

A0A1S3CKU1 uncharacterized protein LOC1035016011.3e-2182.43Show/hide
Query:  MGQLSSKQKKKQRAMINQTKQKGKGSDEDNGEVEDRIIEVGFMGRD-NKNYCSTGLKNIGLCLVPLSMALNYFA
        M + SSKQ+KKQRA INQTK KGKGS ED GEVEDRII+VG +GRD NKNYCSTGLKNIGLCLVP+SMALNYFA
Subjt:  MGQLSSKQKKKQRAMINQTKQKGKGSDEDNGEVEDRIIEVGFMGRD-NKNYCSTGLKNIGLCLVPLSMALNYFA

A0A5D3BKS2 Putative CTD small phosphatase-like protein 21.3e-2182.43Show/hide
Query:  MGQLSSKQKKKQRAMINQTKQKGKGSDEDNGEVEDRIIEVGFMGRD-NKNYCSTGLKNIGLCLVPLSMALNYFA
        M + SSKQ+KKQRA INQTK KGKGS ED GEVEDRII+VG +GRD NKNYCSTGLKNIGLCLVP+SMALNYFA
Subjt:  MGQLSSKQKKKQRAMINQTKQKGKGSDEDNGEVEDRIIEVGFMGRD-NKNYCSTGLKNIGLCLVPLSMALNYFA

A0A6J1FU25 uncharacterized protein LOC1114468881.3e-1370.13Show/hide
Query:  MGQLSSKQKKKQR-----AMINQTKQKGKGSDEDNGEVEDRIIEVGFMGRDNKNYCSTGLKNIGLCLVPLSMALNYF
        M  LSSKQKK+ +     AMINQTK KGK   E+ GEVEDR IEVGF+GRDN   CSTGLKNIGLCLVP+SMA+NYF
Subjt:  MGQLSSKQKKKQR-----AMINQTKQKGKGSDEDNGEVEDRIIEVGFMGRDNKNYCSTGLKNIGLCLVPLSMALNYF

A0A6J1JN91 uncharacterized protein LOC1114868253.5e-1471.05Show/hide
Query:  MGQLSSKQKKKQR----AMINQTKQKGKGSDEDNGEVEDRIIEVGFMGRDNKNYCSTGLKNIGLCLVPLSMALNYF
        M  LSSKQKK+Q+    AMINQTK +GK   E+ GEVEDR IEVGF+GRDN   CSTGLKNIGLCLVP+SMA+NYF
Subjt:  MGQLSSKQKKKQR----AMINQTKQKGKGSDEDNGEVEDRIIEVGFMGRDNKNYCSTGLKNIGLCLVPLSMALNYF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCAGCTTAGTTCTAAGCAAAAGAAGAAGCAGAGGGCAATGATCAATCAAACAAAACAAAAGGGAAAAGGAAGTGATGAAGACAATGGGGAGGTTGAAGATAGAAT
AATTGAAGTGGGTTTTATGGGGAGGGATAATAAGAATTATTGTAGCACAGGGCTTAAGAATATTGGCCTTTGTTTAGTTCCTCTATCCATGGCTCTCAATTATTTTGCTT
AG
mRNA sequenceShow/hide mRNA sequence
ATGGGTCAGCTTAGTTCTAAGCAAAAGAAGAAGCAGAGGGCAATGATCAATCAAACAAAACAAAAGGGAAAAGGAAGTGATGAAGACAATGGGGAGGTTGAAGATAGAAT
AATTGAAGTGGGTTTTATGGGGAGGGATAATAAGAATTATTGTAGCACAGGGCTTAAGAATATTGGCCTTTGTTTAGTTCCTCTATCCATGGCTCTCAATTATTTTGCTT
AG
Protein sequenceShow/hide protein sequence
MGQLSSKQKKKQRAMINQTKQKGKGSDEDNGEVEDRIIEVGFMGRDNKNYCSTGLKNIGLCLVPLSMALNYFA