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HG10011567 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011567
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUbiquitin family protein
Genome locationChr01:7232459..7232692
RNA-Seq ExpressionHG10011567
SyntenyHG10011567
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0019941 - modification-dependent protein catabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0031386 - protein tag (molecular function)
GO:0031625 - ubiquitin protein ligase binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR019956 - Ubiquitin domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAI83761.1 Polyubiqutin 2, partial [Epidinium ecaudatum]1.9e-1765.79Show/hide
Query:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGG
        MQIFVKTF GK I+LDV  S TI +VKAKI+ + GI  + Q L++AGK LEDNRTLADYNIQ +S+LHL++RL GG
Subjt:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGG

KAE8650141.1 hypothetical protein Csa_010182 [Cucumis sativus]1.1e-1761.04Show/hide
Query:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF
        MQIFVKTFDGK +SLD+  + TI  +KAK+EA+ G+ A+SQ +VYAGK+LE+++TLA+ NI+NDS+L+L++RL GGF
Subjt:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF

OTN66650.1 putative Ubiquitin [Plasmodium knowlesi]5.6e-1763.64Show/hide
Query:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF
        MQIFVKT  GK I+LDV SS TI +VKAKI+ + GI  + Q L++AGK LED RTL+DYNIQ +S+LHL++RL GGF
Subjt:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF

SBS87151.1 ubiquitin, putative [Plasmodium ovale curtisi]5.6e-1763.64Show/hide
Query:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF
        MQIFVKT  GK I+LDV SS TI +VKAKI+ + GI  + Q L++AGK LED RTL+DYNIQ +S+LHL++RL GGF
Subjt:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF

XP_007049060.2 PREDICTED: polyubiquitin [Theobroma cacao]5.6e-1763.64Show/hide
Query:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF
        MQIFVKT  GK I+L+V SS TI +VKAKI+ + GI  + Q L++AGK LED RTLADYNIQ +S+LHL++RL GGF
Subjt:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF

TrEMBL top hitse value%identityAlignment
A0A0A0L314 Ubiquitin-like domain-containing protein5.4e-1861.04Show/hide
Query:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF
        MQIFVKTFDGK +SLD+  + TI  +KAK+EA+ G+ A+SQ +VYAGK+LE+++TLA+ NI+NDS+L+L++RL GGF
Subjt:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF

A0A1A8W2K5 Ubiquitin, putative2.7e-1763.64Show/hide
Query:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF
        MQIFVKT  GK I+LDV SS TI +VKAKI+ + GI  + Q L++AGK LED RTL+DYNIQ +S+LHL++RL GGF
Subjt:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF

A0A1C3KWV5 Polyubiquitin, putative2.7e-1763.64Show/hide
Query:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF
        MQIFVKT  GK I+LDV SS TI +VKAKI+ + GI  + Q L++AGK LED RTL+DYNIQ +S+LHL++RL GGF
Subjt:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF

A0A1G4H2X7 Polyubiquitin 5, putative2.7e-1763.64Show/hide
Query:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF
        MQIFVKT  GK I+LDV SS TI +VKAKI+ + GI  + Q L++AGK LED RTL+DYNIQ +S+LHL++RL GGF
Subjt:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF

Q1RQE6 Polyubiqutin 2 (Fragment)9.3e-1865.79Show/hide
Query:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGG
        MQIFVKTF GK I+LDV  S TI +VKAKI+ + GI  + Q L++AGK LEDNRTLADYNIQ +S+LHL++RL GG
Subjt:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGG

SwissProt top hitse value%identityAlignment
P0CG84 Polyubiquitin (Fragment)9.5e-2063.64Show/hide
Query:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF
        MQIFVKT  GK I+L+V SS TI +VKAKI+ + GI  + Q L++AGK LED RTLADYNIQ +S+LHL++RL GGF
Subjt:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF

P0CG85 Polyubiquitin9.5e-2063.64Show/hide
Query:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF
        MQIFVKT  GK I+L+V SS TI +VKAKI+ + GI  + Q L++AGK LED RTLADYNIQ +S+LHL++RL GGF
Subjt:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF

P69313 Ubiquitin9.5e-2063.64Show/hide
Query:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF
        MQIFVKT  GK I+L+V SS TI +VKAKI+ + GI  + Q L++AGK LED RTLADYNIQ +S+LHL++RL GGF
Subjt:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF

P69322 Polyubiquitin9.5e-2063.64Show/hide
Query:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF
        MQIFVKT  GK I+L+V SS TI +VKAKI+ + GI  + Q L++AGK LED RTLADYNIQ +S+LHL++RL GGF
Subjt:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF

P69325 Polyubiquitin9.5e-2063.64Show/hide
Query:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF
        MQIFVKT  GK I+L+V SS TI +VKAKI+ + GI  + Q L++AGK LED RTLADYNIQ +S+LHL++RL GGF
Subjt:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF

Arabidopsis top hitse value%identityAlignment
AT4G02890.1 Ubiquitin family protein6.8e-2163.64Show/hide
Query:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF
        MQIFVKT  GK I+L+V SS TI +VKAKI+ + GI  + Q L++AGK LED RTLADYNIQ +S+LHL++RL GGF
Subjt:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF

AT4G05050.1 ubiquitin 116.8e-2163.64Show/hide
Query:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF
        MQIFVKT  GK I+L+V SS TI +VKAKI+ + GI  + Q L++AGK LED RTLADYNIQ +S+LHL++RL GGF
Subjt:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF

AT4G05320.2 polyubiquitin 106.8e-2163.64Show/hide
Query:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF
        MQIFVKT  GK I+L+V SS TI +VKAKI+ + GI  + Q L++AGK LED RTLADYNIQ +S+LHL++RL GGF
Subjt:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF

AT4G05320.3 polyubiquitin 106.8e-2163.64Show/hide
Query:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF
        MQIFVKT  GK I+L+V SS TI +VKAKI+ + GI  + Q L++AGK LED RTLADYNIQ +S+LHL++RL GGF
Subjt:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF

AT4G05320.4 polyubiquitin 106.8e-2163.64Show/hide
Query:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF
        MQIFVKT  GK I+L+V SS TI +VKAKI+ + GI  + Q L++AGK LED RTLADYNIQ +S+LHL++RL GGF
Subjt:  MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGATCTTTGTAAAAACGTTTGATGGGAAGAGAATTAGCTTAGATGTCGGGTCATCGATGACGATTACGGATGTGAAGGCTAAAATCGAAGCTCAGAGAGGCATATA
CGCTAATTCTCAGATGCTGGTTTATGCTGGAAAAATTCTTGAAGATAATCGAACTCTTGCAGATTATAACATTCAGAATGACTCTTCATTGCATTTGATTGTTCGTCTTG
TTGGTGGCTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGATCTTTGTAAAAACGTTTGATGGGAAGAGAATTAGCTTAGATGTCGGGTCATCGATGACGATTACGGATGTGAAGGCTAAAATCGAAGCTCAGAGAGGCATATA
CGCTAATTCTCAGATGCTGGTTTATGCTGGAAAAATTCTTGAAGATAATCGAACTCTTGCAGATTATAACATTCAGAATGACTCTTCATTGCATTTGATTGTTCGTCTTG
TTGGTGGCTTTTAA
Protein sequenceShow/hide protein sequence
MQIFVKTFDGKRISLDVGSSMTITDVKAKIEAQRGIYANSQMLVYAGKILEDNRTLADYNIQNDSSLHLIVRLVGGF