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HG10011568 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011568
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionL10-interacting MYB domain-containing protein
Genome locationChr01:7245763..7251136
RNA-Seq ExpressionHG10011568
SyntenyHG10011568
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025481.1 polyubiquitin-like [Cucumis melo var. makuwa]6.2e-0861.9Show/hide
Query:  MATEEDPSLKNDTSSFISIVAAIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSK
        MAT++   L N+    I + AAI+AVQAL DIDEDL FEAFDFLEK  NA +FIAMN  LRS+
Subjt:  MATEEDPSLKNDTSSFISIVAAIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSK

KAA0025486.1 polyubiquitin-like [Cucumis melo var. makuwa]2.5e-0947.31Show/hide
Query:  MATEEDPSLKNDTSSFISIVAAIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSKHILDSSKEKKSNVTAGAMWHLLVTEKIFTY
        MAT++  SL N+    I + AAI+AVQALPDI EDLLFEAFDFLEK K+A +F+A+N  LRSK +     ++ S +   AM   +++  + T+
Subjt:  MATEEDPSLKNDTSSFISIVAAIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSKHILDSSKEKKSNVTAGAMWHLLVTEKIFTY

KAF2601030.1 hypothetical protein F2Q68_00009668 [Brassica cretica]1.7e-0528.78Show/hide
Query:  DTSSFISIVAAIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSKHILDSSKEKKSNVTAGAMWHLLVTEKIFTYSSPPLFLKKFHIKSEKTK
        D +  + I  A++A+QALPD+DE+L+ +A D LE    A  F+A+N KLR K +L   +  +S+      W     E              FH   E T 
Subjt:  DTSSFISIVAAIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSKHILDSSKEKKSNVTAGAMWHLLVTEKIFTYSSPPLFLKKFHIKSEKTK

Query:  TKSSSQALLEEEEEEEEEAMASEFPVSRTSNMSKNNSTVLPASVV---AAINIVQILDEQQYRPSKRDDFVLDACECFLQNEQNAQVFNLLTERSLQEKW
          SSS       EE++  ++  E P ++  + +  +   L    V    A+ I   ++  Q  P   ++ +LDAC+  L+++  A+ F  L  + L++KW
Subjt:  TKSSSQALLEEEEEEEEEAMASEFPVSRTSNMSKNNSTVLPASVV---AAINIVQILDEQQYRPSKRDDFVLDACECFLQNEQNAQVFNLLTERSLQEKW

Query:  VLRKI
        +LRK+
Subjt:  VLRKI

KAF8376838.1 hypothetical protein HHK36_031504 [Tetracentron sinense]3.1e-0751.56Show/hide
Query:  KNDTSSFISIVAAIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSKHILDSSKEKK
        +N  +S ISI   I AVQA+PDIDEDLL +AFDFLE  K A +F+A++ KLR K ++   + +K
Subjt:  KNDTSSFISIVAAIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSKHILDSSKEKK

KAF8401399.1 hypothetical protein HHK36_012337 [Tetracentron sinense]3.1e-0751.56Show/hide
Query:  KNDTSSFISIVAAIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSKHILDSSKEKK
        +N  +S ISI   I AVQA+PDIDEDLL +AFDFLE  K A +F+A++ KLR K ++   + +K
Subjt:  KNDTSSFISIVAAIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSKHILDSSKEKK

TrEMBL top hitse value%identityAlignment
A0A1S3TNU4 uncharacterized protein LOC1067573063.1e-0554.39Show/hide
Query:  KNDTSSFISIVAAIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSKHIL
        KNDTS  ISI   I+AVQALPD+D+DL+ +A DFLE  + A  F+A++ KLR K ++
Subjt:  KNDTSSFISIVAAIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSKHIL

A0A5A7SML9 Polyubiquitin-like3.0e-0861.9Show/hide
Query:  MATEEDPSLKNDTSSFISIVAAIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSK
        MAT++   L N+    I + AAI+AVQAL DIDEDL FEAFDFLEK  NA +FIAMN  LRS+
Subjt:  MATEEDPSLKNDTSSFISIVAAIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSK

A0A5D3BQI8 Polyubiquitin-like1.2e-0947.31Show/hide
Query:  MATEEDPSLKNDTSSFISIVAAIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSKHILDSSKEKKSNVTAGAMWHLLVTEKIFTY
        MAT++  SL N+    I + AAI+AVQALPDI EDLLFEAFDFLEK K+A +F+A+N  LRSK +     ++ S +   AM   +++  + T+
Subjt:  MATEEDPSLKNDTSSFISIVAAIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSKHILDSSKEKKSNVTAGAMWHLLVTEKIFTY

A0A6J1KSC5 L10-interacting MYB domain-containing protein1.8e-0546.27Show/hide
Query:  DPSLKNDTSSFISIVAAIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSKHILDSSKEK
        D    +D SS ISI   I+A+QALP++DEDL+ +A D LE  K A  FIA++ KLR K ++   + K
Subjt:  DPSLKNDTSSFISIVAAIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSKHILDSSKEK

A0A7J0FJ17 Myb_DNA-bind_3 domain-containing protein1.1e-0542.03Show/hide
Query:  DPSLKNDTSSFISIVAAIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSKHILDSSKEKKS
        D    ++ SSFIS+   I+A+Q+LPD+DEDL+ +A D LE  K A  F+A++ KLR K ++   + ++S
Subjt:  DPSLKNDTSSFISIVAAIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSKHILDSSKEKKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G24960.1 unknown protein1.2e-0444.44Show/hide
Query:  AIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSKHIL
        A+ A+QALPD+D++LL +A D LE  + A  F+A++  LR K ++
Subjt:  AIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSKHIL

AT2G24960.2 unknown protein1.2e-0444.44Show/hide
Query:  AIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSKHIL
        A+ A+QALPD+D++LL +A D LE  + A  F+A++  LR K ++
Subjt:  AIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSKHIL

AT4G02210.1 unknown protein4.7e-0641.82Show/hide
Query:  DTSSFISIVAAIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSKHIL
        D +  +SI   ++A+QALPD+D++L+ +A D LE    A  F+A++ KLR K +L
Subjt:  DTSSFISIVAAIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSKHIL

AT4G02210.2 unknown protein4.7e-0641.82Show/hide
Query:  DTSSFISIVAAIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSKHIL
        D +  +SI   ++A+QALPD+D++L+ +A D LE    A  F+A++ KLR K +L
Subjt:  DTSSFISIVAAIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSKHIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTGAGGAAGATCCTTCATTGAAAAACGATACCTCAAGCTTCATATCAATTGTAGCTGCAATTCAAGCGGTGCAGGCATTACCCGACATTGACGAAGACCTTCT
TTTTGAAGCCTTTGATTTTCTGGAAAAGGGAAAGAATGCCGTAGTGTTTATTGCAATGAATACAAAATTAAGAAGCAAACACATTCTTGATAGCTCAAAGGAAAAAAAAT
CGAATGTGACAGCTGGTGCGATGTGGCATCTGCTGGTTACCGAGAAAATTTTCACCTACTCCTCTCCTCCACTTTTCCTAAAAAAATTTCACATTAAATCTGAGAAGACT
AAAACCAAAAGCTCATCACAGGCGTTACTCGAAGAAGAAGAAGAAGAAGAAGAAGAAGCTATGGCAAGTGAATTTCCTGTTTCTCGTACTTCAAACATGTCGAAGAACAA
CAGTACCGTTCTTCCAGCCTCTGTTGTAGCTGCGATTAATATTGTCCAGATTCTGGATGAGCAACAGTACCGTCCTTCCAAACGTGATGATTTTGTGTTAGATGCATGTG
AATGTTTTTTACAGAACGAGCAAAACGCTCAAGTATTTAATTTGTTGACTGAACGAAGCTTACAAGAAAAGTGGGTGTTAAGGAAAATAAATTCGTCCAAAGGTTTTGAT
TCTAAATCTGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTGAGGAAGATCCTTCATTGAAAAACGATACCTCAAGCTTCATATCAATTGTAGCTGCAATTCAAGCGGTGCAGGCATTACCCGACATTGACGAAGACCTTCT
TTTTGAAGCCTTTGATTTTCTGGAAAAGGGAAAGAATGCCGTAGTGTTTATTGCAATGAATACAAAATTAAGAAGCAAACACATTCTTGATAGCTCAAAGGAAAAAAAAT
CGAATGTGACAGCTGGTGCGATGTGGCATCTGCTGGTTACCGAGAAAATTTTCACCTACTCCTCTCCTCCACTTTTCCTAAAAAAATTTCACATTAAATCTGAGAAGACT
AAAACCAAAAGCTCATCACAGGCGTTACTCGAAGAAGAAGAAGAAGAAGAAGAAGAAGCTATGGCAAGTGAATTTCCTGTTTCTCGTACTTCAAACATGTCGAAGAACAA
CAGTACCGTTCTTCCAGCCTCTGTTGTAGCTGCGATTAATATTGTCCAGATTCTGGATGAGCAACAGTACCGTCCTTCCAAACGTGATGATTTTGTGTTAGATGCATGTG
AATGTTTTTTACAGAACGAGCAAAACGCTCAAGTATTTAATTTGTTGACTGAACGAAGCTTACAAGAAAAGTGGGTGTTAAGGAAAATAAATTCGTCCAAAGGTTTTGAT
TCTAAATCTGGTTAA
Protein sequenceShow/hide protein sequence
MATEEDPSLKNDTSSFISIVAAIQAVQALPDIDEDLLFEAFDFLEKGKNAVVFIAMNTKLRSKHILDSSKEKKSNVTAGAMWHLLVTEKIFTYSSPPLFLKKFHIKSEKT
KTKSSSQALLEEEEEEEEEAMASEFPVSRTSNMSKNNSTVLPASVVAAINIVQILDEQQYRPSKRDDFVLDACECFLQNEQNAQVFNLLTERSLQEKWVLRKINSSKGFD
SKSG