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HG10011578 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011578
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPotassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
Genome locationChr01:7385894..7386274
RNA-Seq ExpressionHG10011578
SyntenyHG10011578
Gene Ontology termsGO:0010258 - NADH dehydrogenase complex (plastoquinone) assembly (biological process)
GO:0009570 - chloroplast stroma (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025435.1 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 [Cucumis melo var. makuwa]1.6e-5897.62Show/hide
Query:  MAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEERMVTELFRVLKLMEMDLAMVKAAV
        +AKPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILR+DGKVEERMVTELFRVLKLMEMDLAMVKAAV
Subjt:  MAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEERMVTELFRVLKLMEMDLAMVKAAV

Query:  KEETLSERLGQAKARCRQAILVANSF
        K+ETLSERLGQAKARCRQAILVANSF
Subjt:  KEETLSERLGQAKARCRQAILVANSF
XP_004152910.2 uncharacterized protein LOC101210146 [Cucumis sativus]1.4e-5796.03Show/hide
Query:  MAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEERMVTELFRVLKLMEMDLAMVKAAV
        +AKPEPPNFEIGWKRTKEI++EKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILR+DGKVEERMVTELFRVLKLMEMDLAMVKAAV
Subjt:  MAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEERMVTELFRVLKLMEMDLAMVKAAV

Query:  KEETLSERLGQAKARCRQAILVANSF
        K+ETLSERLGQAKARCRQAILVANSF
Subjt:  KEETLSERLGQAKARCRQAILVANSF
XP_008452345.1 PREDICTED: uncharacterized protein LOC103493403 [Cucumis melo]1.6e-5897.62Show/hide
Query:  MAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEERMVTELFRVLKLMEMDLAMVKAAV
        +AKPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILR+DGKVEERMVTELFRVLKLMEMDLAMVKAAV
Subjt:  MAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEERMVTELFRVLKLMEMDLAMVKAAV

Query:  KEETLSERLGQAKARCRQAILVANSF
        K+ETLSERLGQAKARCRQAILVANSF
Subjt:  KEETLSERLGQAKARCRQAILVANSF
XP_022932131.1 uncharacterized protein LOC111438454 [Cucurbita moschata]3.8e-5592.86Show/hide
Query:  MAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEERMVTELFRVLKLMEMDLAMVKAAV
        + KPEPPNFEIGWKRTKEINLEKP+GWMIMDFLEKLE LMEREFGSTELLAKVGEIVAERAREEAEIL +DGKVE+RMVTELFRVLKLMEMDLAMVKAAV
Subjt:  MAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEERMVTELFRVLKLMEMDLAMVKAAV

Query:  KEETLSERLGQAKARCRQAILVANSF
        K+ETLSERL QAKARCRQAILVANSF
Subjt:  KEETLSERLGQAKARCRQAILVANSF
XP_022985263.1 uncharacterized protein LOC111483306 [Cucurbita maxima]5.5e-5490.48Show/hide
Query:  MAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEERMVTELFRVLKLMEMDLAMVKAAV
        + KPEPPNFEIGWKRTKEINLEKP+GWMIMDFLEKLE LMEREFGSTELLAKVGEIVAERAREEAEIL +DGKVE+RMVTELFRVLKLMEMDLAMVKAAV
Subjt:  MAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEERMVTELFRVLKLMEMDLAMVKAAV

Query:  KEETLSERLGQAKARCRQAILVANSF
        ++ETL++RL QAKARCRQAILVANSF
Subjt:  KEETLSERLGQAKARCRQAILVANSF
TrEMBL top hitse value%identityAlignment
A0A0A0L6D8 Uncharacterized protein6.7e-5896.03Show/hide
Query:  MAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEERMVTELFRVLKLMEMDLAMVKAAV
        +AKPEPPNFEIGWKRTKEI++EKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILR+DGKVEERMVTELFRVLKLMEMDLAMVKAAV
Subjt:  MAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEERMVTELFRVLKLMEMDLAMVKAAV

Query:  KEETLSERLGQAKARCRQAILVANSF
        K+ETLSERLGQAKARCRQAILVANSF
Subjt:  KEETLSERLGQAKARCRQAILVANSF
A0A1S3BT06 uncharacterized protein LOC1034934037.9e-5997.62Show/hide
Query:  MAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEERMVTELFRVLKLMEMDLAMVKAAV
        +AKPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILR+DGKVEERMVTELFRVLKLMEMDLAMVKAAV
Subjt:  MAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEERMVTELFRVLKLMEMDLAMVKAAV

Query:  KEETLSERLGQAKARCRQAILVANSF
        K+ETLSERLGQAKARCRQAILVANSF
Subjt:  KEETLSERLGQAKARCRQAILVANSF
A0A5D3C0F1 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 17.9e-5997.62Show/hide
Query:  MAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEERMVTELFRVLKLMEMDLAMVKAAV
        +AKPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILR+DGKVEERMVTELFRVLKLMEMDLAMVKAAV
Subjt:  MAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEERMVTELFRVLKLMEMDLAMVKAAV

Query:  KEETLSERLGQAKARCRQAILVANSF
        K+ETLSERLGQAKARCRQAILVANSF
Subjt:  KEETLSERLGQAKARCRQAILVANSF
A0A6J1EVI2 uncharacterized protein LOC1114384541.8e-5592.86Show/hide
Query:  MAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEERMVTELFRVLKLMEMDLAMVKAAV
        + KPEPPNFEIGWKRTKEINLEKP+GWMIMDFLEKLE LMEREFGSTELLAKVGEIVAERAREEAEIL +DGKVE+RMVTELFRVLKLMEMDLAMVKAAV
Subjt:  MAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEERMVTELFRVLKLMEMDLAMVKAAV

Query:  KEETLSERLGQAKARCRQAILVANSF
        K+ETLSERL QAKARCRQAILVANSF
Subjt:  KEETLSERLGQAKARCRQAILVANSF
A0A6J1JD53 uncharacterized protein LOC1114833062.6e-5490.48Show/hide
Query:  MAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEERMVTELFRVLKLMEMDLAMVKAAV
        + KPEPPNFEIGWKRTKEINLEKP+GWMIMDFLEKLE LMEREFGSTELLAKVGEIVAERAREEAEIL +DGKVE+RMVTELFRVLKLMEMDLAMVKAAV
Subjt:  MAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEERMVTELFRVLKLMEMDLAMVKAAV

Query:  KEETLSERLGQAKARCRQAILVANSF
        ++ETL++RL QAKARCRQAILVANSF
Subjt:  KEETLSERLGQAKARCRQAILVANSF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G51100.1 unknown protein9.9e-5486.29Show/hide
Query:  KPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEERMVTELFRVLKLMEMDLAMVKAAVKE
        KPEPPNFEIGWKRTKEINLEKP G++IMDFLEK E LM REFGS ELLAK GEIVAERAREEAE+LR++GKVEERMVTELFRVLKLMEMDLAMVKA+VK+
Subjt:  KPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEERMVTELFRVLKLMEMDLAMVKAAVKE

Query:  ETLSERLGQAKARCRQAILVANSF
        ETLS+R+ QA+ARCRQAILVANSF
Subjt:  ETLSERLGQAKARCRQAILVANSF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAGCCGGAGCCGCCGAACTTCGAAATCGGGTGGAAGAGAACGAAAGAGATCAATCTGGAGAAGCCGATCGGGTGGATGATAATGGATTTTCTGGAGAAGCTTGA
AGGGTTAATGGAAAGGGAATTTGGGTCGACGGAATTGCTTGCGAAAGTGGGAGAGATTGTGGCGGAGAGGGCGAGAGAGGAGGCGGAGATCTTGCGAGAGGACGGGAAAG
TGGAGGAGAGAATGGTAACAGAGCTGTTTAGGGTTTTGAAATTGATGGAAATGGATTTGGCTATGGTGAAAGCGGCTGTGAAGGAGGAAACGTTGAGTGAGCGGCTTGGT
CAGGCCAAAGCAAGGTGTAGGCAAGCTATACTTGTTGCTAATTCTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAGCCGGAGCCGCCGAACTTCGAAATCGGGTGGAAGAGAACGAAAGAGATCAATCTGGAGAAGCCGATCGGGTGGATGATAATGGATTTTCTGGAGAAGCTTGA
AGGGTTAATGGAAAGGGAATTTGGGTCGACGGAATTGCTTGCGAAAGTGGGAGAGATTGTGGCGGAGAGGGCGAGAGAGGAGGCGGAGATCTTGCGAGAGGACGGGAAAG
TGGAGGAGAGAATGGTAACAGAGCTGTTTAGGGTTTTGAAATTGATGGAAATGGATTTGGCTATGGTGAAAGCGGCTGTGAAGGAGGAAACGTTGAGTGAGCGGCTTGGT
CAGGCCAAAGCAAGGTGTAGGCAAGCTATACTTGTTGCTAATTCTTTCTGA
Protein sequenceShow/hide protein sequence
MAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILREDGKVEERMVTELFRVLKLMEMDLAMVKAAVKEETLSERLG
QAKARCRQAILVANSF