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HG10011587 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011587
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionWD repeat-containing protein 25 isoform X2
Genome locationChr01:7670206..7670535
RNA-Seq ExpressionHG10011587
SyntenyHG10011587
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046999.1 WD repeat-containing protein 25 isoform X2 [Cucumis melo var. makuwa]8.9e-3784.85Show/hide
Query:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSP
        MESLFKAYSN+SDDYDEEDEPKPKRLALSSSPSKRPELE  KFKPN RPSHC  SN +P E IM+PGRY+SKRERALLSSAPASRAPES  NPSLQS P
Subjt:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSP

TYK04782.1 WD repeat-containing protein 25 isoform X2 [Cucumis melo var. makuwa]8.9e-3784.85Show/hide
Query:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSP
        MESLFKAYSN+SDDYDEEDEPKPKRLALSSSPSKRPELE  KFKPN RPSHC  SN +P E IM+PGRY+SKRERALLSSAPASRAPES  NPSLQS P
Subjt:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSP

XP_016901209.1 PREDICTED: WD repeat-containing protein 25 isoform X1 [Cucumis melo]8.9e-3784.85Show/hide
Query:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSP
        MESLFKAYSN+SDDYDEEDEPKPKRLALSSSPSKRPELE  KFKPN RPSHC  SN +P E IM+PGRY+SKRERALLSSAPASRAPES  NPSLQS P
Subjt:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSP

XP_016901210.1 PREDICTED: WD repeat-containing protein 25 isoform X2 [Cucumis melo]8.9e-3784.85Show/hide
Query:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSP
        MESLFKAYSN+SDDYDEEDEPKPKRLALSSSPSKRPELE  KFKPN RPSHC  SN +P E IM+PGRY+SKRERALLSSAPASRAPES  NPSLQS P
Subjt:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSP

XP_038903500.1 WD repeat-containing protein 25 [Benincasa hispida]1.9e-3989.9Show/hide
Query:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSP
        MESLFKAYSNASDDYDEEDEPKPKRLA SSSPSKRP+LER KFKPNFRPSHC  SNSE QEGIM+PGRYVSKRERALLSSAP SRAPES LNP+LQSSP
Subjt:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSP

TrEMBL top hitse value%identityAlignment
A0A0A0L2H7 Uncharacterized protein1.6e-3981.48Show/hide
Query:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSPG
        MESLFKAYSN+SDDYDEEDEPKPKRLALSSSPSKRPE E  KFKPN R  HC DSNSE  E IM+PGRYVSKRERALLSS PASRAP+S  NPS Q+ PG
Subjt:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSPG

Query:  ICPFRFFS
        ICPFR FS
Subjt:  ICPFRFFS

A0A1S4DZ03 WD repeat-containing protein 25 isoform X14.3e-3784.85Show/hide
Query:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSP
        MESLFKAYSN+SDDYDEEDEPKPKRLALSSSPSKRPELE  KFKPN RPSHC  SN +P E IM+PGRY+SKRERALLSSAPASRAPES  NPSLQS P
Subjt:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSP

A0A1S4DZQ2 WD repeat-containing protein 25 isoform X24.3e-3784.85Show/hide
Query:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSP
        MESLFKAYSN+SDDYDEEDEPKPKRLALSSSPSKRPELE  KFKPN RPSHC  SN +P E IM+PGRY+SKRERALLSSAPASRAPES  NPSLQS P
Subjt:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSP

A0A5A7U0J5 WD repeat-containing protein 25 isoform X24.3e-3784.85Show/hide
Query:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSP
        MESLFKAYSN+SDDYDEEDEPKPKRLALSSSPSKRPELE  KFKPN RPSHC  SN +P E IM+PGRY+SKRERALLSSAPASRAPES  NPSLQS P
Subjt:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSP

A0A5D3C0T2 WD repeat-containing protein 25 isoform X24.3e-3784.85Show/hide
Query:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSP
        MESLFKAYSN+SDDYDEEDEPKPKRLALSSSPSKRPELE  KFKPN RPSHC  SN +P E IM+PGRY+SKRERALLSSAPASRAPES  NPSLQS P
Subjt:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G54520.1 Transducin/WD40 repeat-like superfamily protein9.6e-0536.44Show/hide
Query:  MESLFKAYSNASDDYDE---EDEPKPKRLALSSSPSKR--PELERSKFKPNFRPSHCPDSNSEPQEG----------IMLPGRYVSKRERALLSSAPASR
        M+ +  +Y+N SDD  E    +    K  A  S PSKR  P  E  ++KP  RP     S SE Q            + +PGRYVSKRER+LL+S     
Subjt:  MESLFKAYSNASDDYDE---EDEPKPKRLALSSSPSKR--PELERSKFKPNFRPSHCPDSNSEPQEG----------IMLPGRYVSKRERALLSSAPASR

Query:  APE--SVLNPSLQSSPGI
         P+  S L+    SSP +
Subjt:  APE--SVLNPSLQSSPGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCTCTGTTCAAAGCTTACTCAAATGCTTCTGACGATTATGACGAAGAAGATGAACCTAAGCCCAAGCGCTTGGCCCTCTCCTCTTCACCTTCGAAGAGACCAGA
ACTCGAACGTTCCAAATTCAAGCCGAACTTCCGGCCATCGCATTGCCCGGACTCGAATTCAGAGCCTCAAGAGGGGATTATGCTTCCTGGACGCTACGTTTCCAAGAGAG
AGCGAGCACTATTGAGTTCAGCTCCAGCTTCAAGGGCTCCGGAGTCAGTTCTTAATCCATCCCTCCAGTCTTCACCTGGTATCTGTCCTTTTCGTTTCTTTAGCCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATCTCTGTTCAAAGCTTACTCAAATGCTTCTGACGATTATGACGAAGAAGATGAACCTAAGCCCAAGCGCTTGGCCCTCTCCTCTTCACCTTCGAAGAGACCAGA
ACTCGAACGTTCCAAATTCAAGCCGAACTTCCGGCCATCGCATTGCCCGGACTCGAATTCAGAGCCTCAAGAGGGGATTATGCTTCCTGGACGCTACGTTTCCAAGAGAG
AGCGAGCACTATTGAGTTCAGCTCCAGCTTCAAGGGCTCCGGAGTCAGTTCTTAATCCATCCCTCCAGTCTTCACCTGGTATCTGTCCTTTTCGTTTCTTTAGCCTTTAA
Protein sequenceShow/hide protein sequence
MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSPGICPFRFFSL