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HG10011598 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011598
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionSpindle pole body component protein
Genome locationChr01:7803675..7804174
RNA-Seq ExpressionHG10011598
SyntenyHG10011598
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577452.1 hypothetical protein SDJN03_25026, partial [Cucurbita argyrosperma subsp. sororia]7.7e-4886.61Show/hide
Query:  MSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRNN
        MSR+ENPE T APG +EM+SLAPITTRKHRRRKR ALLPSAAKLAADWKPSLGAISEDKVVLV+ EREKSDDQTAESERSVKRKSGS DGE+RGV  R+N
Subjt:  MSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRNN

Query:  SNDFSLRRSPAAIPVVIPAFSPTPFLF
        SNDF  RRSPA+IPVVIPAFSPTPFLF
Subjt:  SNDFSLRRSPAAIPVVIPAFSPTPFLF

KAG7015524.1 hypothetical protein SDJN02_23160 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-4786.61Show/hide
Query:  MSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRNN
        MSR+E PE T APG +EM+SLAPITTRKHRRRKR ALLPSAAKLAADWKPSLGAISEDKVVLV+ EREKSDDQTAESERSVKRKSGSRDGE+RGV  R+N
Subjt:  MSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRNN

Query:  SNDFSLRRSPAAIPVVIPAFSPTPFLF
        SNDF  RRSPA+IPVVIPAFSPTPFLF
Subjt:  SNDFSLRRSPAAIPVVIPAFSPTPFLF

XP_004149939.2 uncharacterized protein LOC101213465 [Cucumis sativus]3.1e-4989.06Show/hide
Query:  MSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPS-AAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRN
        MSRI+NPEETEA G KEMRSL PITTRKHRRRKRSALLPS AAKLAADWKPSLGAISEDKVVLVVMEREKSD+QT E ERSVKRKS SRDGESRGV  RN
Subjt:  MSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPS-AAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRN

Query:  NSNDFSLRRSPAAIPVVIPAFSPTPFLF
        NSNDFSLR+SP+AIPVVIPAFSP PFLF
Subjt:  NSNDFSLRRSPAAIPVVIPAFSPTPFLF

XP_022932132.1 uncharacterized protein LOC111438455 [Cucurbita moschata]1.2e-4887.4Show/hide
Query:  MSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRNN
        MSR+ENPE T APG +EM+SLAPITTRKHRRRKR ALLPSAAKLAADWKPSLGAISEDKVVLV+ EREKSDDQTAESERSVKRKSGSRDGE+RGV  R+N
Subjt:  MSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRNN

Query:  SNDFSLRRSPAAIPVVIPAFSPTPFLF
        SNDF  RRSPA+IPVVIPAFSPTPFLF
Subjt:  SNDFSLRRSPAAIPVVIPAFSPTPFLF

XP_038905048.1 uncharacterized protein LOC120091204 [Benincasa hispida]5.5e-5493.7Show/hide
Query:  MSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRNN
        MSRIENPEETEAPG KE+RSLAPITTRKHRRRKRSA LPSAAKLA DWKPSLGAISEDKVVLVVMEREKSD+QTAESERSVKRKSGSRDGESRGV  RNN
Subjt:  MSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRNN

Query:  SNDFSLRRSPAAIPVVIPAFSPTPFLF
        SNDFS+RRSPAAIPVVIPAFSPTPFLF
Subjt:  SNDFSLRRSPAAIPVVIPAFSPTPFLF

TrEMBL top hitse value%identityAlignment
A0A0A0L6G1 Uncharacterized protein1.5e-4989.06Show/hide
Query:  MSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPS-AAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRN
        MSRI+NPEETEA G KEMRSL PITTRKHRRRKRSALLPS AAKLAADWKPSLGAISEDKVVLVVMEREKSD+QT E ERSVKRKS SRDGESRGV  RN
Subjt:  MSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPS-AAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRN

Query:  NSNDFSLRRSPAAIPVVIPAFSPTPFLF
        NSNDFSLR+SP+AIPVVIPAFSP PFLF
Subjt:  NSNDFSLRRSPAAIPVVIPAFSPTPFLF

A0A1S3BTM8 uncharacterized protein LOC1034933941.4e-4788.28Show/hide
Query:  MSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPS-AAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRN
        MSRIENPEETEA   KEMR+LAPITTRKHRRRKRSALLPS AAKLAADWKPSLGAISEDKVVLVVMEREKSDDQ AE ERSVKRKSGSRDGESR V  R 
Subjt:  MSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPS-AAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRN

Query:  NSNDFSLRRSPAAIPVVIPAFSPTPFLF
        NSNDFSLR++P+AIPVVIPAFSP PFLF
Subjt:  NSNDFSLRRSPAAIPVVIPAFSPTPFLF

A0A5A7TVI5 Spindle pole body component protein1.4e-4788.28Show/hide
Query:  MSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPS-AAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRN
        MSRIENPEETEA   KEMR+LAPITTRKHRRRKRSALLPS AAKLAADWKPSLGAISEDKVVLVVMEREKSDDQ AE ERSVKRKSGSRDGESR V  R 
Subjt:  MSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPS-AAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRN

Query:  NSNDFSLRRSPAAIPVVIPAFSPTPFLF
        NSNDFSLR++P+AIPVVIPAFSP PFLF
Subjt:  NSNDFSLRRSPAAIPVVIPAFSPTPFLF

A0A6J1EVT0 uncharacterized protein LOC1114384555.7e-4987.4Show/hide
Query:  MSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRNN
        MSR+ENPE T APG +EM+SLAPITTRKHRRRKR ALLPSAAKLAADWKPSLGAISEDKVVLV+ EREKSDDQTAESERSVKRKSGSRDGE+RGV  R+N
Subjt:  MSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRNN

Query:  SNDFSLRRSPAAIPVVIPAFSPTPFLF
        SNDF  RRSPA+IPVVIPAFSPTPFLF
Subjt:  SNDFSLRRSPAAIPVVIPAFSPTPFLF

A0A6J1JD62 uncharacterized protein LOC1114833131.4e-4785.83Show/hide
Query:  MSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRNN
        MSR+ENPE T APG +EM+SLAPI TRKHRRRKR ALLPSAAKLAADWKPSLGAISEDKVVLV+ EREKSDDQTA SERSVKRKSGSRDGE+RGV  R+N
Subjt:  MSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRNN

Query:  SNDFSLRRSPAAIPVVIPAFSPTPFLF
        SNDF  RRSPA+IPVVIPAFSPTPFLF
Subjt:  SNDFSLRRSPAAIPVVIPAFSPTPFLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G54585.1 unknown protein5.9e-0634.95Show/hide
Query:  TTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRNNSNDFSLRRSPAAIPVVIPAFSPTP
        T  K RRR++   +       A+W+PSL  ISE+K  +  +  EK++++     +S     G     S G   R  S+DF       A   VIPAFSPTP
Subjt:  TTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRNNSNDFSLRRSPAAIPVVIPAFSPTP

Query:  FLF
        F+F
Subjt:  FLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACGCATAGAGAATCCGGAGGAGACAGAGGCGCCAGGACCTAAGGAGATGAGATCTCTGGCTCCGATTACAACCAGAAAACACCGGCGGAGAAAACGAAGCGCGTT
ATTGCCTTCGGCGGCGAAACTAGCCGCCGATTGGAAGCCGTCGCTGGGAGCGATCTCGGAGGATAAGGTAGTTCTGGTGGTGATGGAGAGAGAGAAGAGCGATGATCAGA
CGGCGGAATCGGAACGATCGGTGAAAAGAAAGAGTGGATCTCGAGACGGAGAAAGCAGAGGAGTTCAGAGCCGTAATAACAGTAACGATTTCAGCCTCAGGCGAAGTCCT
GCAGCGATTCCGGTCGTGATTCCGGCGTTTTCTCCGACTCCGTTCTTGTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCACGCATAGAGAATCCGGAGGAGACAGAGGCGCCAGGACCTAAGGAGATGAGATCTCTGGCTCCGATTACAACCAGAAAACACCGGCGGAGAAAACGAAGCGCGTT
ATTGCCTTCGGCGGCGAAACTAGCCGCCGATTGGAAGCCGTCGCTGGGAGCGATCTCGGAGGATAAGGTAGTTCTGGTGGTGATGGAGAGAGAGAAGAGCGATGATCAGA
CGGCGGAATCGGAACGATCGGTGAAAAGAAAGAGTGGATCTCGAGACGGAGAAAGCAGAGGAGTTCAGAGCCGTAATAACAGTAACGATTTCAGCCTCAGGCGAAGTCCT
GCAGCGATTCCGGTCGTGATTCCGGCGTTTTCTCCGACTCCGTTCTTGTTCTGA
Protein sequenceShow/hide protein sequence
MSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGVQSRNNSNDFSLRRSP
AAIPVVIPAFSPTPFLF