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HG10011599 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011599
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr01:7820914..7821573
RNA-Seq ExpressionHG10011599
SyntenyHG10011599
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]1.5e-1943.12Show/hide
Query:  MAKKLGDAMGKFLDVDCDQDDFCWGESLRIKILLDITKPLRRGIWIEPGGDQEKLWIHVKYERLPEFSYCCGRIRRVVKDCK-FVSRGPEKNLEFWKFGS
        MA +LG+A+G F DV+ + ++FCWG  LR+++  D+ KPL RGI +   G     WI ++YERLP+F Y CGR+  ++KDC         KNL+   +G 
Subjt:  MAKKLGDAMGKFLDVDCDQDDFCWGESLRIKILLDITKPLRRGIWIEPGGDQEKLWIHVKYERLPEFSYCCGRIRRVVKDCK-FVSRGPEKNLEFWKFGS

Query:  WLRYQGNNS
        WLR+QG+ +
Subjt:  WLRYQGNNS

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]8.4e-1838.93Show/hide
Query:  MAKKLGDAMGKFLDVDCDQDDFCWGESLRIKILLDITKPLRRGIWIEPGGDQEKLWIHVKYERLPEFSYCCGRIRRVVKDC--KFVSRGPEKNLEFWKFG
        MA +LG+A+G F+DVDC++  F WG SLRI++L+DITKPLRRGI I   G     WI ++YERLP+F Y CG I     DC  ++++   +      ++G
Subjt:  MAKKLGDAMGKFLDVDCDQDDFCWGESLRIKILLDITKPLRRGIWIEPGGDQEKLWIHVKYERLPEFSYCCGRIRRVVKDC--KFVSRGPEKNLEFWKFG

Query:  SWLRYQGNNS----RRRQKNPSDQKEQESPPSESPTSHPKNLTPNSNPL
         WLR+ G+ +     R+ K+P+    ++S  S S  S  + +      L
Subjt:  SWLRYQGNNS----RRRQKNPSDQKEQESPPSESPTSHPKNLTPNSNPL

XP_042942793.1 uncharacterized protein LOC122276977 [Carya illinoinensis]9.3e-1744.66Show/hide
Query:  MAKKLGDAMGKFLDVDCDQDDFCWGESLRIKILLDITKPLRRGIWIEPGGDQEKLWIHVKYERLPEFSYCCGRIRRVVKDCKFVSRGPEKNLEF-WKFGS
        M +KLG ++GK L VD D  + CWG+ LR+K++LDITKPL RG +I   G  EK WI  KYER+  F Y CG I+     C+ + +G         ++G+
Subjt:  MAKKLGDAMGKFLDVDCDQDDFCWGESLRIKILLDITKPLRRGIWIEPGGDQEKLWIHVKYERLPEFSYCCGRIRRVVKDCKFVSRGPEKNLEF-WKFGS

Query:  WLR
        WLR
Subjt:  WLR

XP_042958241.1 uncharacterized protein LOC122293864 [Carya illinoinensis]9.3e-1744.66Show/hide
Query:  MAKKLGDAMGKFLDVDCDQDDFCWGESLRIKILLDITKPLRRGIWIEPGGDQEKLWIHVKYERLPEFSYCCGRIRRVVKDCKFVSRGPEKNLEF-WKFGS
        M +KLG ++GK L VD D  + CWG+ LR+K++LDITKPL RG +I   G  EK WI  KYER+  F Y CG I+     C+ + +G         ++G+
Subjt:  MAKKLGDAMGKFLDVDCDQDDFCWGESLRIKILLDITKPLRRGIWIEPGGDQEKLWIHVKYERLPEFSYCCGRIRRVVKDCKFVSRGPEKNLEF-WKFGS

Query:  WLR
        WLR
Subjt:  WLR

XP_042961424.1 uncharacterized protein LOC122296079 [Carya illinoinensis]9.3e-1744.66Show/hide
Query:  MAKKLGDAMGKFLDVDCDQDDFCWGESLRIKILLDITKPLRRGIWIEPGGDQEKLWIHVKYERLPEFSYCCGRIRRVVKDCKFVSRGPEKNLEF-WKFGS
        M +KLG ++GK L VD D  + CWG+ LR+K++LDITKPL RG +I   G  EK WI  KYER+  F Y CG I+     C+ + +G         ++G+
Subjt:  MAKKLGDAMGKFLDVDCDQDDFCWGESLRIKILLDITKPLRRGIWIEPGGDQEKLWIHVKYERLPEFSYCCGRIRRVVKDCKFVSRGPEKNLEF-WKFGS

Query:  WLR
        WLR
Subjt:  WLR

TrEMBL top hitse value%identityAlignment
A0A2I4E2H1 uncharacterized protein LOC1089856671.9e-1543.4Show/hide
Query:  LGDAMGKFLDVDCDQDDFCWGESLRIKILLDITKPLRRGIWIEPGGDQEKLWIHVKYERLPEFSYCCGRIRRVVKDCKFVSRGPEKNLEFW--KFGSWLR
        LG +MG+ L VD D    CWG  LR+++++D+TKPL RG ++  G    K WI  KYERLP F Y CG+I+ V   C  + RG + +LE +  ++G+WLR
Subjt:  LGDAMGKFLDVDCDQDDFCWGESLRIKILLDITKPLRRGIWIEPGGDQEKLWIHVKYERLPEFSYCCGRIRRVVKDCKFVSRGPEKNLEFW--KFGSWLR

Query:  YQGNNS
            +S
Subjt:  YQGNNS

A0A6J1BSZ1 uncharacterized protein LOC1110054817.4e-2043.12Show/hide
Query:  MAKKLGDAMGKFLDVDCDQDDFCWGESLRIKILLDITKPLRRGIWIEPGGDQEKLWIHVKYERLPEFSYCCGRIRRVVKDCK-FVSRGPEKNLEFWKFGS
        MA +LG+A+G F DV+ + ++FCWG  LR+++  D+ KPL RGI +   G     WI ++YERLP+F Y CGR+  ++KDC         KNL+   +G 
Subjt:  MAKKLGDAMGKFLDVDCDQDDFCWGESLRIKILLDITKPLRRGIWIEPGGDQEKLWIHVKYERLPEFSYCCGRIRRVVKDCK-FVSRGPEKNLEFWKFGS

Query:  WLRYQGNNS
        WLR+QG+ +
Subjt:  WLRYQGNNS

A0A6J1DU55 uncharacterized protein LOC1110231354.1e-1838.93Show/hide
Query:  MAKKLGDAMGKFLDVDCDQDDFCWGESLRIKILLDITKPLRRGIWIEPGGDQEKLWIHVKYERLPEFSYCCGRIRRVVKDC--KFVSRGPEKNLEFWKFG
        MA +LG+A+G F+DVDC++  F WG SLRI++L+DITKPLRRGI I   G     WI ++YERLP+F Y CG I     DC  ++++   +      ++G
Subjt:  MAKKLGDAMGKFLDVDCDQDDFCWGESLRIKILLDITKPLRRGIWIEPGGDQEKLWIHVKYERLPEFSYCCGRIRRVVKDC--KFVSRGPEKNLEFWKFG

Query:  SWLRYQGNNS----RRRQKNPSDQKEQESPPSESPTSHPKNLTPNSNPL
         WLR+ G+ +     R+ K+P+    ++S  S S  S  + +      L
Subjt:  SWLRYQGNNS----RRRQKNPSDQKEQESPPSESPTSHPKNLTPNSNPL

A0A6P9E3M1 uncharacterized protein LOC1183448021.4e-1542.61Show/hide
Query:  LGDAMGKFLDVDCDQDDFCWGESLRIKILLDITKPLRRGIWIEPGGDQEKLWIHVKYERLPEFSYCCGRIRRVVKDCKFVSRGPEKNLEFW--KFGSWLR
        LG +MG+ L VD D    CWG  LR+++++D+TKPL RG ++  G    K WI  KYERLP F Y CG+I+ V   C  + RG + +LE +  ++G+WLR
Subjt:  LGDAMGKFLDVDCDQDDFCWGESLRIKILLDITKPLRRGIWIEPGGDQEKLWIHVKYERLPEFSYCCGRIRRVVKDCKFVSRGPEKNLEFW--KFGSWLR

Query:  -------YQGNNSRR
                +G+ SRR
Subjt:  -------YQGNNSRR

A0A803LAB8 Uncharacterized protein8.5e-1637.82Show/hide
Query:  KLGDAMGKFLDVDCDQDDFCWGESLRIKILLDITKPLRRGIWIEPGGDQEKLWIHVKYERLPEFSYCCGRIRRVVKDCKFVSRGPEKNLEF-WKFGSWLR
        ++GD +G FL+ D D D   WGE LRIK+++DI KPLRRG+++  G    K W+ +KYERL EF + CGR+      C F     E N +  +++G WLR
Subjt:  KLGDAMGKFLDVDCDQDDFCWGESLRIKILLDITKPLRRGIWIEPGGDQEKLWIHVKYERLPEFSYCCGRIRRVVKDCKFVSRGPEKNLEF-WKFGSWLR

Query:  YQGNNSRRRQKNPSDQKEQ
               R+ +   +++++
Subjt:  YQGNNSRRRQKNPSDQKEQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAGAAATTGGGAGATGCGATGGGCAAGTTCTTAGACGTAGATTGCGATCAGGATGACTTCTGTTGGGGAGAAAGTCTAAGAATCAAAATCTTGTTGGATATCAC
AAAGCCTCTGAGAAGAGGCATTTGGATTGAACCTGGAGGTGACCAAGAAAAGTTATGGATCCATGTCAAATACGAAAGACTTCCAGAATTCAGCTACTGTTGCGGTCGGA
TCAGACGTGTAGTTAAAGATTGTAAATTTGTTAGCAGAGGCCCTGAAAAGAATCTGGAGTTTTGGAAATTCGGTAGTTGGTTAAGATATCAAGGAAACAATTCAAGAAGA
CGGCAAAAGAATCCATCAGATCAAAAGGAGCAGGAGAGTCCCCCTTCAGAATCACCTACATCCCATCCAAAAAACCTGACCCCAAATTCCAACCCATTGAGAAAGACAGA
ATCTAACCTCACCCCTAAGAATCAAGTGGGCAGGAAATTTTCTCCCCCCATTAATTCGTTTGACTTAAATCTTGGACCATCTTTGGTTAAAAGTTTTGTCAAGACCAGAG
ATCCCATTGTGAAGATTTCTGTTATTAATGATAAGAAGGAAGCACAAGAGTCTGTCGTCGACACTTTAATCCAAGAAGATGGAGTTAGAGAACTTTTGGTCAAAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAGAAATTGGGAGATGCGATGGGCAAGTTCTTAGACGTAGATTGCGATCAGGATGACTTCTGTTGGGGAGAAAGTCTAAGAATCAAAATCTTGTTGGATATCAC
AAAGCCTCTGAGAAGAGGCATTTGGATTGAACCTGGAGGTGACCAAGAAAAGTTATGGATCCATGTCAAATACGAAAGACTTCCAGAATTCAGCTACTGTTGCGGTCGGA
TCAGACGTGTAGTTAAAGATTGTAAATTTGTTAGCAGAGGCCCTGAAAAGAATCTGGAGTTTTGGAAATTCGGTAGTTGGTTAAGATATCAAGGAAACAATTCAAGAAGA
CGGCAAAAGAATCCATCAGATCAAAAGGAGCAGGAGAGTCCCCCTTCAGAATCACCTACATCCCATCCAAAAAACCTGACCCCAAATTCCAACCCATTGAGAAAGACAGA
ATCTAACCTCACCCCTAAGAATCAAGTGGGCAGGAAATTTTCTCCCCCCATTAATTCGTTTGACTTAAATCTTGGACCATCTTTGGTTAAAAGTTTTGTCAAGACCAGAG
ATCCCATTGTGAAGATTTCTGTTATTAATGATAAGAAGGAAGCACAAGAGTCTGTCGTCGACACTTTAATCCAAGAAGATGGAGTTAGAGAACTTTTGGTCAAAAAATAA
Protein sequenceShow/hide protein sequence
MAKKLGDAMGKFLDVDCDQDDFCWGESLRIKILLDITKPLRRGIWIEPGGDQEKLWIHVKYERLPEFSYCCGRIRRVVKDCKFVSRGPEKNLEFWKFGSWLRYQGNNSRR
RQKNPSDQKEQESPPSESPTSHPKNLTPNSNPLRKTESNLTPKNQVGRKFSPPINSFDLNLGPSLVKSFVKTRDPIVKISVINDKKEAQESVVDTLIQEDGVRELLVKK