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HG10011604 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011604
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionvalencene synthase-like
Genome locationChr01:7914983..7915253
RNA-Seq ExpressionHG10011604
SyntenyHG10011604
Gene Ontology termsGO:0016102 - diterpenoid biosynthetic process (biological process)
GO:0000287 - magnesium ion binding (molecular function)
GO:0047461 - (+)-delta-cadinene synthase activity (molecular function)
InterPro domainsIPR005630 - Terpene synthase, metal-binding domain
IPR008949 - Isoprenoid synthase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650158.1 hypothetical protein Csa_009547 [Cucumis sativus]5.3e-1561.73Show/hide
Query:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSC---KDKIEISTNIVIYSSNIYKSEN
        MEVA  +SGY LL+TISFVCMGDIATKEVF+WL +CPK L+AST I RLMDDVVS    K++  I + +  Y SN  +SE+
Subjt:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSC---KDKIEISTNIVIYSSNIYKSEN

NP_001292628.1 (+)-gamma-cadinene synthase [Cucumis sativus]1.5e-1460.49Show/hide
Query:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSC---KDKIEISTNIVIYSSNIYKSEN
        MEVA  +SGY LL+TISFVCMGDIATKEVF+WL +CP+ L+AST I RLMDDVVS    K++  I + +  Y SN  +SE+
Subjt:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSC---KDKIEISTNIVIYSSNIYKSEN

XP_008452328.1 PREDICTED: valencene synthase-like [Cucumis melo]6.9e-1578.95Show/hide
Query:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSCK
        MEVA  +SGY LL+TISFVCMGDIATKEVFDWL +CPK L+AST I RLMDDVVS K
Subjt:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSCK

XP_038903601.1 (+)-gamma-cadinene synthase-like [Benincasa hispida]1.6e-1683.64Show/hide
Query:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVS
        MEVASV+SGYALLATISF CMGD+AT+EVFDW+ ECPK LEASTII RLMDD+VS
Subjt:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVS

XP_038905757.1 (+)-gamma-cadinene synthase-like [Benincasa hispida]9.0e-1580.7Show/hide
Query:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSCK
        MEVA V+SGY LL TISF CMGDIATKEVFDWL ECPK LEASTII RL +DVVS K
Subjt:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSCK

TrEMBL top hitse value%identityAlignment
A0A0A0L579 Uncharacterized protein2.6e-1561.73Show/hide
Query:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSC---KDKIEISTNIVIYSSNIYKSEN
        MEVA  +SGY LL+TISFVCMGDIATKEVF+WL +CPK L+AST I RLMDDVVS    K++  I + +  Y SN  +SE+
Subjt:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSC---KDKIEISTNIVIYSSNIYKSEN

A0A0B4VEV4 Sesquiterpene synthase Tps17.4e-1560Show/hide
Query:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSC---KDKIEISTNIVIYSSNIYKSE
        MEVA  +SGY LL+TISFVCMGDIATKE+FDWL +CPK L+AST I RLMDDVVS    K++  + + +  Y +N   SE
Subjt:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSC---KDKIEISTNIVIYSSNIYKSE

A0A1S3BTM3 valencene synthase-like3.3e-1578.95Show/hide
Query:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSCK
        MEVA  +SGY LL+TISFVCMGDIATKEVFDWL +CPK L+AST I RLMDDVVS K
Subjt:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSCK

A0A1S4DZR2 (+)-gamma-cadinene synthase-like2.2e-1458.75Show/hide
Query:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSC---KDKIEISTNIVIYSSNIYKSE
        MEVA  +SGY LL+TISFVCMGDIAT+E+FDWL +CPK L+AST I RLMDDVVS    K++  + + +  Y +N   SE
Subjt:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSC---KDKIEISTNIVIYSSNIYKSE

Q66PX8 Beta-caryophyllene synthase7.4e-1560.49Show/hide
Query:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSC---KDKIEISTNIVIYSSNIYKSEN
        MEVA  +SGY LL+TISFVCMGDIATKEVF+WL +CP+ L+AST I RLMDDVVS    K++  I + +  Y SN  +SE+
Subjt:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSC---KDKIEISTNIVIYSSNIYKSEN

SwissProt top hitse value%identityAlignment
B5A435 Sesquiterpene synthase4.8e-1159.65Show/hide
Query:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSCK
        M VA VTSGY  L TIS++ MG+IA+KE FDWL   P  +EAS  +CRLMDD+ S K
Subjt:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSCK

B9SCB6 Probable terpene synthase 28.2e-1160Show/hide
Query:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVS
        M +A V+  Y LL   SFV MGDIATKEVFDW    PK +  ++IICRLMDD+VS
Subjt:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVS

F6M8H6 Probable sesquiterpene synthase1.4e-1058.18Show/hide
Query:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVS
        M VA VT+GY  L TIS++ MG+IA+KE FDWL   P  +EAS  +CRLMDD+ S
Subjt:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVS

Q6Q3H2 Valencene synthase1.4e-1059.65Show/hide
Query:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSCK
        M VA  +SGY LLAT SFV MG+IATKE FDW+   PK + +S  I RLMDD+ S K
Subjt:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSCK

Q6Q3H3 (-)-germacrene D synthase1.3e-1162.96Show/hide
Query:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVV
        M VA VTS Y++LAT SFV MGD  TKE FDW+   PK + AS I+CRLMDD+V
Subjt:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVV

Arabidopsis top hitse value%identityAlignment
AT3G32030.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein2.6e-0432.05Show/hide
Query:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSCKDKIEISTNIVIYSSNIYKSEN
        MEV  VT G    A  SF+ M D   K +++W    PK L+A +++ R+ +D+V+ +   E+S   V+   N Y +++
Subjt:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSCKDKIEISTNIVIYSSNIYKSEN

AT4G20200.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein2.0e-0439.74Show/hide
Query:  MEVASV-TSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSCKDKIEISTNIVIYSSNIYKSE
        MEV  V  + YA LA I F+ MG +ATKE F+WL   PK ++  +I  RLM+D++  +D  ++S   V  + N Y  +
Subjt:  MEVASV-TSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSCKDKIEISTNIVIYSSNIYKSE

AT5G23960.1 terpene synthase 215.3e-0544.44Show/hide
Query:  EVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVS
        E A ++SGY  L  ++FV M D+A  + F+WL   PK   AS II R  DD+ S
Subjt:  EVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVS

AT5G23960.2 terpene synthase 215.3e-0544.44Show/hide
Query:  EVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVS
        E A ++SGY  L  ++FV M D+A  + F+WL   PK   AS II R  DD+ S
Subjt:  EVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVS

AT5G48110.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein8.1e-0640.28Show/hide
Query:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSCKDKI---EISTNIVIY
        MEV  VT G  +    +F+ MG+ A KE FDW+   PK ++   +  RL DDV + KD++   EI+T I  Y
Subjt:  MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSCKDKI---EISTNIVIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTGGCTTCAGTTACCTCAGGTTATGCACTACTTGCAACTATTTCATTTGTTTGCATGGGTGACATTGCAACAAAGGAGGTATTTGATTGGCTTTTAGAATGCCC
TAAAACTCTTGAAGCCTCAACCATCATTTGTAGACTCATGGACGATGTTGTCTCCTGCAAGGACAAGATTGAAATATCTACCAATATCGTGATATATTCGTCGAATATCT
ATAAGTCAGAGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTGGCTTCAGTTACCTCAGGTTATGCACTACTTGCAACTATTTCATTTGTTTGCATGGGTGACATTGCAACAAAGGAGGTATTTGATTGGCTTTTAGAATGCCC
TAAAACTCTTGAAGCCTCAACCATCATTTGTAGACTCATGGACGATGTTGTCTCCTGCAAGGACAAGATTGAAATATCTACCAATATCGTGATATATTCGTCGAATATCT
ATAAGTCAGAGAATTAA
Protein sequenceShow/hide protein sequence
MEVASVTSGYALLATISFVCMGDIATKEVFDWLLECPKTLEASTIICRLMDDVVSCKDKIEISTNIVIYSSNIYKSEN