; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10011613 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011613
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description(+)-gamma-cadinene synthase-like
Genome locationChr01:8162457..8162976
RNA-Seq ExpressionHG10011613
SyntenyHG10011613
Gene Ontology termsGO:0016102 - diterpenoid biosynthetic process (biological process)
GO:0045338 - farnesyl diphosphate metabolic process (biological process)
GO:0051762 - sesquiterpene biosynthetic process (biological process)
GO:0000287 - magnesium ion binding (molecular function)
GO:0010334 - sesquiterpene synthase activity (molecular function)
InterPro domainsIPR001906 - Terpene synthase, N-terminal domain
IPR008930 - Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
IPR008949 - Isoprenoid synthase domain superfamily
IPR036965 - Terpene synthase, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
NP_001284382.1 (+)-gamma-cadinene synthase [Cucumis melo]1.8e-2951.97Show/hide
Query:  MKAEEISDIKLRPTANYHPNIWKDYSLAPSC-DALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSS
        MK  +I D+K R  AN+HPNIWK++ L+ +  DALK+++ M E  ++LKEE+R M+IA VE  + KL LVDSIQRLGV YHFE E+ + LE IYV + +S
Subjt:  MKAEEISDIKLRPTANYHPNIWKDYSLAPSC-DALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSS

Query:  L---NNHSGDEDLNTVALLFRLLRRQGYKIPC----------GKFKETTHND
        L   N +S  EDL+  ALLFRLLR+QGY+I C          GKFKE+   D
Subjt:  L---NNHSGDEDLNTVALLFRLLRRQGYKIPC----------GKFKETTHND

XP_022142732.1 (+)-gamma-cadinene synthase-like [Momordica charantia]1.3e-4064.49Show/hide
Query:  MKAEEISDIKLRPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSL
        MKA  +S+ K RP A++HP+IWKD+ LAP  +AL++EDE+ EE +QLKEEVRKMLI VVE P DKLKLVD IQ+LGV YHFEKEI+QVLE +YV +K+ L
Subjt:  MKAEEISDIKLRPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSL

Query:  NNHSGDEDLNTVALLFRLLRRQGYKIPCGKFKETTHND
        N+  GDEDLNTV+LLFR+LR+QGY+I C  F +   ND
Subjt:  NNHSGDEDLNTVALLFRLLRRQGYKIPCGKFKETTHND

XP_023520451.1 LOW QUALITY PROTEIN: (+)-gamma-cadinene synthase-like [Cucurbita pepo subsp. pepo]1.0e-2954.74Show/hide
Query:  RPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNT
        RP A YHP+IWKD+ L+ + DAL ++ EM ++ +QLK EV+KML+      ++KL LVDSIQRLGV YHFE EI QVLE+IY  ++    +  GDEDL+T
Subjt:  RPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNT

Query:  VALLFRLLRRQGYKIPC----------GKFKETTHND
        V+LLFRLLR+QGYKIPC          GKFKE+   D
Subjt:  VALLFRLLRRQGYKIPC----------GKFKETTHND

XP_038903601.1 (+)-gamma-cadinene synthase-like [Benincasa hispida]1.4e-3153.02Show/hide
Query:  MKAEEISDIKLRPTANYHPNIWKDYSLAPSC-DALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSS
        MKA +I D K R  AN+HP+IW D+ L+ +  DALK+++EM E+ + LKEE+R M++  V+ P++KLKLVDSIQRLGV YHFE EI Q+LE +Y+ + S+
Subjt:  MKAEEISDIKLRPTANYHPNIWKDYSLAPSC-DALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSS

Query:  LNNHSGDEDLNTVALLFRLLRRQGYKIPC----------GKFKETTHND
        L N   DEDL+ + LLFRLLR+QGY+I C          GKFKE+  ND
Subjt:  LNNHSGDEDLNTVALLFRLLRRQGYKIPC----------GKFKETTHND

XP_038905757.1 (+)-gamma-cadinene synthase-like [Benincasa hispida]1.6e-3557.72Show/hide
Query:  MKAEEISDIKLRPTANYHPNIWKDYSLA-PSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSS
        MK  +I D K R TAN+HPNIW D+ L+  S DALK++D M E+ ++LKEE+R M++  VE P++KLKLVDSIQRLGV YHFE EI Q+LE +YV + S+
Subjt:  MKAEEISDIKLRPTANYHPNIWKDYSLA-PSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSS

Query:  LNNHSGDEDLNTVALLFRLLRRQGYKIPC----------GKFKETTHND
        L N  GDEDL+T+ALLFRLLR+QGY+I C          GKFKE+  ND
Subjt:  LNNHSGDEDLNTVALLFRLLRRQGYKIPC----------GKFKETTHND

TrEMBL top hitse value%identityAlignment
A0A1S2X8Q6 (+)-gamma-cadinene synthase8.5e-3051.97Show/hide
Query:  MKAEEISDIKLRPTANYHPNIWKDYSLAPSC-DALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSS
        MK  +I D+K R  AN+HPNIWK++ L+ +  DALK+++ M E  ++LKEE+R M+IA VE  + KL LVDSIQRLGV YHFE E+ + LE IYV + +S
Subjt:  MKAEEISDIKLRPTANYHPNIWKDYSLAPSC-DALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSS

Query:  L---NNHSGDEDLNTVALLFRLLRRQGYKIPC----------GKFKETTHND
        L   N +S  EDL+  ALLFRLLR+QGY+I C          GKFKE+   D
Subjt:  L---NNHSGDEDLNTVALLFRLLRRQGYKIPC----------GKFKETTHND

A0A1S4DZR2 (+)-gamma-cadinene synthase-like1.9e-2952.63Show/hide
Query:  MKAEEISDIKLRPTANYHPNIWKDYSLAPSC-DALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSS
        MK  +I D+K R  AN+HPNIWK++ L+ +  DALK+++ M E  ++LKEE+R M+IA VE  + KL LVDSIQRLGV YHFE EI + LE IYV + +S
Subjt:  MKAEEISDIKLRPTANYHPNIWKDYSLAPSC-DALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSS

Query:  L---NNHSGDEDLNTVALLFRLLRRQGYKIPC----------GKFKETTHND
        L   N  S  EDL+  ALLFRLLR+QGY+I C          GKFKE+   D
Subjt:  L---NNHSGDEDLNTVALLFRLLRRQGYKIPC----------GKFKETTHND

A0A6J1CNP6 (+)-gamma-cadinene synthase-like6.3e-4164.49Show/hide
Query:  MKAEEISDIKLRPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSL
        MKA  +S+ K RP A++HP+IWKD+ LAP  +AL++EDE+ EE +QLKEEVRKMLI VVE P DKLKLVD IQ+LGV YHFEKEI+QVLE +YV +K+ L
Subjt:  MKAEEISDIKLRPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSL

Query:  NNHSGDEDLNTVALLFRLLRRQGYKIPCGKFKETTHND
        N+  GDEDLNTV+LLFR+LR+QGY+I C  F +   ND
Subjt:  NNHSGDEDLNTVALLFRLLRRQGYKIPCGKFKETTHND

A0A6J1EW93 (+)-gamma-cadinene synthase-like4.2e-2954.01Show/hide
Query:  RPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNT
        RP A YHP+IWKD+ L+ + D L ++ EM E+ ++LK EV+KML+      ++KL LVDSIQRLGV YHFE EI QVLE+IY  ++    +  GDEDL T
Subjt:  RPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNT

Query:  VALLFRLLRRQGYKIPC----------GKFKETTHND
        V+LLFRLLR+QGYKIPC          GKFKE+   D
Subjt:  VALLFRLLRRQGYKIPC----------GKFKETTHND

Q66PX8 Beta-caryophyllene synthase3.6e-2851.32Show/hide
Query:  MKAEEISDIKLRPTANYHPNIWKDYSLAPSC-DALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSS
        MK  +I D K R  AN+HP IWK++ L+ +  DALK++  M E  ++LKEE+R M+IA V+ P+ KL LVDSIQRLGV YHFE EI Q LE +YV + +S
Subjt:  MKAEEISDIKLRPTANYHPNIWKDYSLAPSC-DALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSS

Query:  L---NNHSGDEDLNTVALLFRLLRRQGYKIPC----------GKFKETTHND
        L   +N S D+DL+  ALLFRLLR+ GY+I C          GKFKE+   D
Subjt:  L---NNHSGDEDLNTVALLFRLLRRQGYKIPC----------GKFKETTHND

SwissProt top hitse value%identityAlignment
B2KSJ5 (+)-gamma-cadinene synthase2.3e-3251.97Show/hide
Query:  MKAEEISDIKLRPTANYHPNIWKDYSLAPSC-DALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSS
        MK  +I D+K R  AN+HPNIWK++ L+ +  DALK+++ M E  ++LKEE+R M+IA VE  + KL LVDSIQRLGV YHFE E+ + LE IYV + +S
Subjt:  MKAEEISDIKLRPTANYHPNIWKDYSLAPSC-DALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSS

Query:  L---NNHSGDEDLNTVALLFRLLRRQGYKIPC----------GKFKETTHND
        L   N +S  EDL+  ALLFRLLR+QGY+I C          GKFKE+   D
Subjt:  L---NNHSGDEDLNTVALLFRLLRRQGYKIPC----------GKFKETTHND

B5A435 Sesquiterpene synthase1.7e-2243.33Show/hide
Query:  RPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNT
        RP AN+ P+IW D  +  +C+    + +   + ++LKE+VR+ L A V+KP+ +L ++D+ QRLG+ YHFE EI + LE IY+      N   G  DL +
Subjt:  RPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNT

Query:  VALLFRLLRRQGYKIPCGKF
        VAL FRLLR+ GYK+ C  F
Subjt:  VALLFRLLRRQGYKIPCGKF

E3W207 Sesquiterpene synthase1.7e-2243.33Show/hide
Query:  RPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNT
        RP AN+ P+IW D  +  +C+    + +   + ++LKE+VR+ L A V+KP+ +L ++D+ QRLG+ YHFE EI + LE IY+      N   G  DL +
Subjt:  RPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNT

Query:  VALLFRLLRRQGYKIPCGKF
        VAL FRLLR+ GYK+ C  F
Subjt:  VALLFRLLRRQGYKIPCGKF

Q6Q3H3 (-)-germacrene D synthase1.3e-2245.67Show/hide
Query:  RPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNT
        R  AN+HP+IW D+ L+ + +    +D + +  QQLKEEVRKML+A  +    KL L+D+IQRLGV YHFE EI +VL+ +   F  S+   S +ED+ T
Subjt:  RPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNT

Query:  VALLFRLLRRQGYKIPCGKFKETTHND
         +L FRLLR+QGY + C  F     N+
Subjt:  VALLFRLLRRQGYKIPCGKFKETTHND

U3LVL5 Germacrene D synthase4.3e-2341.73Show/hide
Query:  KLRPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDL
        ++R +A +HP +W DY LA + D  ++     EE  + KE V+K+L      P DK++L+D+IQRLG+ YHFEKEI ++L+ I+  FK+       D+DL
Subjt:  KLRPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDL

Query:  NTVALLFRLLRRQGYKIPC----------GKFKETTHND
        +TVAL FRLLR+ GY + C          G F E+  ND
Subjt:  NTVALLFRLLRRQGYKIPC----------GKFKETTHND

Arabidopsis top hitse value%identityAlignment
AT1G31950.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein4.2e-1326.98Show/hide
Query:  PTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNTV
        PT ++ P++W D+ L+ S +     DE+  E +  K   R  L++      +K++L+  +  +G+ YHF+KEI  +L+  + +    +    G++DL T+
Subjt:  PTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNTV

Query:  ALLFRLLRRQGYKIPCGKFKETTHND
        +++F + +  G+K+ C  F     ND
Subjt:  ALLFRLLRRQGYKIPCGKFKETTHND

AT2G24210.1 terpene synthase 102.9e-1435.38Show/hide
Query:  RPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNT
        R +ANY P+ W  + L  S +    +D+ + E   LKE+VRKML    +  +D+L+ +D +Q+LGV YHFE EI  +L   Y + ++++     + DL+ 
Subjt:  RPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNT

Query:  VALLFRLLRRQGYKIP----------CGKF
         AL FRL R+ G+ +           CGKF
Subjt:  VALLFRLLRRQGYKIP----------CGKF

AT3G14520.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein1.1e-1329.2Show/hide
Query:  RPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNT
        RP+  + P++W D+ L+ S D  +  DE+  E + +K  V+ ML++      +K++L+  +  LG  YHF+KEI  +L+  + +    +    G++DL T
Subjt:  RPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNT

Query:  VALLFRLLRRQGYKIPC----------GKFKETTHND
        ++++F + R  G+K+ C          G+FKE+   D
Subjt:  VALLFRLLRRQGYKIPC----------GKFKETTHND

AT3G25810.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein3.8e-1437.07Show/hide
Query:  RPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKP-IDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLN
        R + NY P+ W D+S   S +   + ++ +     LK++V+KML  V  K  ++KL+L+D +Q+LGV YHFE+EI+ +L   ++E   ++     +EDL+
Subjt:  RPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKP-IDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLN

Query:  TVALLFRLLRRQGYKI
          AL FRLLR+ G+ +
Subjt:  TVALLFRLLRRQGYKI

AT4G16740.1 terpene synthase 035.5e-1338.98Show/hide
Query:  RPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDE---D
        R +ANY P++W+   L    +    ED  +E    LK+EV KML    E  +++L+L+D++QRLGV YHFE+EI + L  ++V+   +  N        D
Subjt:  RPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDE---D

Query:  LNTVALLFRLLRRQGYKI
        L   AL FRLLR+ G+ I
Subjt:  LNTVALLFRLLRRQGYKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGCAGAAGAAATCTCTGACATCAAACTTCGACCTACTGCCAATTATCATCCCAATATTTGGAAGGATTATTCTCTTGCACCAAGTTGTGATGCATTGAAAATGGA
GGATGAAATGATAGAAGAATTCCAACAGTTGAAAGAAGAAGTGAGGAAGATGCTAATTGCTGTGGTTGAAAAACCTATAGATAAGCTAAAGTTGGTTGATTCAATCCAAA
GGTTAGGTGTTTTATACCATTTTGAAAAGGAGATTCATCAAGTTTTGGAAGAAATATATGTGGAGTTTAAGAGTTCATTGAATAATCATAGTGGCGATGAAGATCTTAAT
ACCGTTGCTCTTCTATTTCGTCTACTCAGACGACAAGGTTATAAAATTCCATGTGGTAAGTTCAAAGAAACAACACATAATGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGCAGAAGAAATCTCTGACATCAAACTTCGACCTACTGCCAATTATCATCCCAATATTTGGAAGGATTATTCTCTTGCACCAAGTTGTGATGCATTGAAAATGGA
GGATGAAATGATAGAAGAATTCCAACAGTTGAAAGAAGAAGTGAGGAAGATGCTAATTGCTGTGGTTGAAAAACCTATAGATAAGCTAAAGTTGGTTGATTCAATCCAAA
GGTTAGGTGTTTTATACCATTTTGAAAAGGAGATTCATCAAGTTTTGGAAGAAATATATGTGGAGTTTAAGAGTTCATTGAATAATCATAGTGGCGATGAAGATCTTAAT
ACCGTTGCTCTTCTATTTCGTCTACTCAGACGACAAGGTTATAAAATTCCATGTGGTAAGTTCAAAGAAACAACACATAATGACTGA
Protein sequenceShow/hide protein sequence
MKAEEISDIKLRPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLN
TVALLFRLLRRQGYKIPCGKFKETTHND