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HG10011629 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011629
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr01:8444850..8448913
RNA-Seq ExpressionHG10011629
SyntenyHG10011629
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_021908568.1 uncharacterized protein LOC110822703 [Carica papaya]8.7e-0439.34Show/hide
Query:  FSWTEIKTPPSHTRINRFLYTDSIFPKFVDVTMKLLGRPTSDCFPLLLTVDNEKWDNSPFK
        ++W  ++   S +RI+RFL T ++     ++  KLL RPTSD FP+LL  D  +W   PF+
Subjt:  FSWTEIKTPPSHTRINRFLYTDSIFPKFVDVTMKLLGRPTSDCFPLLLTVDNEKWDNSPFK
TrEMBL top hitse value%identityAlignment
A0A2N9H179 Uncharacterized protein2.5e-0445.16Show/hide
Query:  FSWTEIKTPPSHTRINRFLYTDSIFPKFVDVTMKLLGRPTSDCFPLLLTVDNEKWDNSPFKF
        ++W+     PS +RI+RFL +      + DVT KLL RP SD FPLLL V + +   SPF+F
Subjt:  FSWTEIKTPPSHTRINRFLYTDSIFPKFVDVTMKLLGRPTSDCFPLLLTVDNEKWDNSPFKF
A0A2N9HZA9 Reverse transcriptase domain-containing protein9.4e-0443.55Show/hide
Query:  FSWTEIKTPPSHTRINRFLYTDSIFPKFVDVTMKLLGRPTSDCFPLLLTVDNEKWDNSPFKF
        ++W+     PS +RI+RFL +     ++ DV  KLL RP SD FPLLL V +     SPF+F
Subjt:  FSWTEIKTPPSHTRINRFLYTDSIFPKFVDVTMKLLGRPTSDCFPLLLTVDNEKWDNSPFKF
A0A2N9I593 Reverse transcriptase domain-containing protein6.5e-0546.77Show/hide
Query:  FSWTEIKTPPSHTRINRFLYTDSIFPKFVDVTMKLLGRPTSDCFPLLLTVDNEKWDNSPFKF
        ++W+     PS +RINRFL +      + DVT KLL RP SD FPLLL V + +   SPF+F
Subjt:  FSWTEIKTPPSHTRINRFLYTDSIFPKFVDVTMKLLGRPTSDCFPLLLTVDNEKWDNSPFKF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCAGAAGCTTCTCTAATAACCAAGCAATCTATCGACCAACGCTTGCAGTTGGTCGAGGCGTCGATGGAAGATGTTAAGCAGCAACTAGTAAACGATACGGCCAC
GATGGTGTTAATGCAACAAGCAATTGGCCAGATGACTCACCAAATGAATCAACTTACTGTCAACCACCCTGTTTTGAATGAAGGCAGGCAAGTGGAAGATGGAAGAAGAC
TTCAGAGGAATCAAGAAGAGGTGATGCACGACAATTGGAATCAACAACAACCAAAAGCGAAAATACCTTGTTTCATGATATTTTCTTGGACCGAGATCAAAACGCCTCCA
TCACACACTAGAATCAATCGTTTCTTATACACCGATTCCATCTTTCCAAAGTTTGTGGATGTTACCATGAAGCTGCTGGGCAGACCAACTTCTGACTGCTTTCCCCTTCT
TCTGACTGTGGACAATGAGAAATGGGACAACTCTCCTTTCAAGTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCAGAAGCTTCTCTAATAACCAAGCAATCTATCGACCAACGCTTGCAGTTGGTCGAGGCGTCGATGGAAGATGTTAAGCAGCAACTAGTAAACGATACGGCCAC
GATGGTGTTAATGCAACAAGCAATTGGCCAGATGACTCACCAAATGAATCAACTTACTGTCAACCACCCTGTTTTGAATGAAGGCAGGCAAGTGGAAGATGGAAGAAGAC
TTCAGAGGAATCAAGAAGAGGTGATGCACGACAATTGGAATCAACAACAACCAAAAGCGAAAATACCTTGTTTCATGATATTTTCTTGGACCGAGATCAAAACGCCTCCA
TCACACACTAGAATCAATCGTTTCTTATACACCGATTCCATCTTTCCAAAGTTTGTGGATGTTACCATGAAGCTGCTGGGCAGACCAACTTCTGACTGCTTTCCCCTTCT
TCTGACTGTGGACAATGAGAAATGGGACAACTCTCCTTTCAAGTTCTAA
Protein sequenceShow/hide protein sequence
MEAEASLITKQSIDQRLQLVEASMEDVKQQLVNDTATMVLMQQAIGQMTHQMNQLTVNHPVLNEGRQVEDGRRLQRNQEEVMHDNWNQQQPKAKIPCFMIFSWTEIKTPP
SHTRINRFLYTDSIFPKFVDVTMKLLGRPTSDCFPLLLTVDNEKWDNSPFKF