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HG10011663 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011663
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionFormin-like protein 4 isoform X2
Genome locationChr01:8961092..8968179
RNA-Seq ExpressionHG10011663
SyntenyHG10011663
Gene Ontology termsNA
InterPro domainsIPR004252 - Probable transposase, Ptta/En/Spm, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032748.1 hypothetical protein E6C27_scaffold853G00910 [Cucumis melo var. makuwa]2.2e-2048.03Show/hide
Query:  LLRSHRAELSSSPVPVNSYDSPAEARKHSDKRVARDSDWARLCDRWEREDFKRISEATTKAPTTLPFTHRGGTATFLRHKRK-----KKEEGTGISEIDL
        L R  R  L  S      YDSPA+ARKH  KRVA           W +     + +A  K       T R      LRH        +K+EG  +SEI L
Subjt:  LLRSHRAELSSSPVPVNSYDSPAEARKHSDKRVARDSDWARLCDRWEREDFKRISEATTKAPTTLPFTHRGGTATFLRHKRK-----KKEEGTGISEIDL

Query:  FQITYSNEKKGWVN-AKTKYDEMMALKTASSQEGGEPLLDKEICERVLGKRS
        FQ+T+SNEK GWVN AK KYDEM+ LKT SSQEG EPLL++EICE+VLGKRS
Subjt:  FQITYSNEKKGWVN-AKTKYDEMMALKTASSQEGGEPLLDKEICERVLGKRS

KAA0036187.1 uncharacterized protein E6C27_scaffold69G00560 [Cucumis melo var. makuwa]1.6e-1869.86Show/hide
Query:  HKRKKKEEGTGISEIDLFQITYSNEKKGWVN-AKTKYDEMMALKTASSQEGGEPLLDKEICERVLGKRSGMSK
        H   +KEEG  +SEI+LFQ+T+SNEK GWVN AK KYDEM+ LKT SSQEG EPLL++EIC+RVLGKRSG  K
Subjt:  HKRKKKEEGTGISEIDLFQITYSNEKKGWVN-AKTKYDEMMALKTASSQEGGEPLLDKEICERVLGKRSGMSK

KAE8651942.1 hypothetical protein Csa_006405 [Cucumis sativus]1.1e-4372.73Show/hide
Query:  DSPAEARKHSDKRVARDSDWARLCDRWEREDFKRISEATTKAPTTLPFTHRGGTATFLRHKRKKKEEGTGISEIDLFQITYSNEKKGWVN-AKTKYDEMM
        DSP EARKH DKRVA+DSDWARLCDRWERE FK  SEA TKA + LPFTHRGGT TFLRHK+K KEEG  IS I+LFQ T+S+EKK WV+ AK KYDEM+
Subjt:  DSPAEARKHSDKRVARDSDWARLCDRWEREDFKRISEATTKAPTTLPFTHRGGTATFLRHKRKKKEEGTGISEIDLFQITYSNEKKGWVN-AKTKYDEMM

Query:  ALKTASSQEGGEPLLDKEICERVLGKRSGMSK
         LKT  SQEG + LL+KEICERVL KR G  K
Subjt:  ALKTASSQEGGEPLLDKEICERVLGKRSGMSK

TYJ98779.1 hypothetical protein E5676_scaffold156G00880 [Cucumis melo var. makuwa]2.2e-2048.03Show/hide
Query:  LLRSHRAELSSSPVPVNSYDSPAEARKHSDKRVARDSDWARLCDRWEREDFKRISEATTKAPTTLPFTHRGGTATFLRHKRK-----KKEEGTGISEIDL
        L R  R  L  S      YDSPA+ARKH  KRVA           W +     + +A  K       T R      LRH        +K+EG  +SEI L
Subjt:  LLRSHRAELSSSPVPVNSYDSPAEARKHSDKRVARDSDWARLCDRWEREDFKRISEATTKAPTTLPFTHRGGTATFLRHKRK-----KKEEGTGISEIDL

Query:  FQITYSNEKKGWVN-AKTKYDEMMALKTASSQEGGEPLLDKEICERVLGKRS
        FQ+T+SNEK GWVN AK KYDEM+ LKT SSQEG EPLL++EICE+VLGKRS
Subjt:  FQITYSNEKKGWVN-AKTKYDEMMALKTASSQEGGEPLLDKEICERVLGKRS

TYK21104.1 formin-like protein 4 isoform X2 [Cucumis melo var. makuwa]1.6e-1869.86Show/hide
Query:  HKRKKKEEGTGISEIDLFQITYSNEKKGWVN-AKTKYDEMMALKTASSQEGGEPLLDKEICERVLGKRSGMSK
        H   +KEEG  +SEI+LFQ+T+SNEK GWVN AK KYDEM+ LKT SSQEG EPLL++EIC+RVLGKRSG  K
Subjt:  HKRKKKEEGTGISEIDLFQITYSNEKKGWVN-AKTKYDEMMALKTASSQEGGEPLLDKEICERVLGKRSGMSK

TrEMBL top hitse value%identityAlignment
A0A0A0LM17 Uncharacterized protein4.1e-2080.95Show/hide
Query:  DSPAEARKHSDKRVARDSDWARLCDRWEREDFKRISEATTKAPTTLPFTHRGGTATFLRHKRK
        DSP EARKH DKRVA+DSDWARLCDRWERE FK  SEA TKA + LPFTHRGGT TFLRHK+K
Subjt:  DSPAEARKHSDKRVARDSDWARLCDRWEREDFKRISEATTKAPTTLPFTHRGGTATFLRHKRK

A0A5A7SQC8 DUF4218 domain-containing protein1.1e-2048.03Show/hide
Query:  LLRSHRAELSSSPVPVNSYDSPAEARKHSDKRVARDSDWARLCDRWEREDFKRISEATTKAPTTLPFTHRGGTATFLRHKRK-----KKEEGTGISEIDL
        L R  R  L  S      YDSPA+ARKH  KRVA           W +     + +A  K       T R      LRH        +K+EG  +SEI L
Subjt:  LLRSHRAELSSSPVPVNSYDSPAEARKHSDKRVARDSDWARLCDRWEREDFKRISEATTKAPTTLPFTHRGGTATFLRHKRK-----KKEEGTGISEIDL

Query:  FQITYSNEKKGWVN-AKTKYDEMMALKTASSQEGGEPLLDKEICERVLGKRS
        FQ+T+SNEK GWVN AK KYDEM+ LKT SSQEG EPLL++EICE+VLGKRS
Subjt:  FQITYSNEKKGWVN-AKTKYDEMMALKTASSQEGGEPLLDKEICERVLGKRS

A0A5A7T3L6 DUF4218 domain-containing protein7.8e-1969.86Show/hide
Query:  HKRKKKEEGTGISEIDLFQITYSNEKKGWVN-AKTKYDEMMALKTASSQEGGEPLLDKEICERVLGKRSGMSK
        H   +KEEG  +SEI+LFQ+T+SNEK GWVN AK KYDEM+ LKT SSQEG EPLL++EIC+RVLGKRSG  K
Subjt:  HKRKKKEEGTGISEIDLFQITYSNEKKGWVN-AKTKYDEMMALKTASSQEGGEPLLDKEICERVLGKRSGMSK

A0A5D3BIG6 DUF4218 domain-containing protein1.1e-2048.03Show/hide
Query:  LLRSHRAELSSSPVPVNSYDSPAEARKHSDKRVARDSDWARLCDRWEREDFKRISEATTKAPTTLPFTHRGGTATFLRHKRK-----KKEEGTGISEIDL
        L R  R  L  S      YDSPA+ARKH  KRVA           W +     + +A  K       T R      LRH        +K+EG  +SEI L
Subjt:  LLRSHRAELSSSPVPVNSYDSPAEARKHSDKRVARDSDWARLCDRWEREDFKRISEATTKAPTTLPFTHRGGTATFLRHKRK-----KKEEGTGISEIDL

Query:  FQITYSNEKKGWVN-AKTKYDEMMALKTASSQEGGEPLLDKEICERVLGKRS
        FQ+T+SNEK GWVN AK KYDEM+ LKT SSQEG EPLL++EICE+VLGKRS
Subjt:  FQITYSNEKKGWVN-AKTKYDEMMALKTASSQEGGEPLLDKEICERVLGKRS

A0A5D3DBZ5 Formin-like protein 4 isoform X27.8e-1969.86Show/hide
Query:  HKRKKKEEGTGISEIDLFQITYSNEKKGWVN-AKTKYDEMMALKTASSQEGGEPLLDKEICERVLGKRSGMSK
        H   +KEEG  +SEI+LFQ+T+SNEK GWVN AK KYDEM+ LKT SSQEG EPLL++EIC+RVLGKRSG  K
Subjt:  HKRKKKEEGTGISEIDLFQITYSNEKKGWVN-AKTKYDEMMALKTASSQEGGEPLLDKEICERVLGKRSGMSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTTGTTGCGGAGCCACAGGGCAGAGCTTTCATCATCTCCAGTCCCTGTGAACAGCTACGACTCTCCAGCTGAAGCACGAAAACACAGCGACAAACGAGTGGCACG
AGATTCAGATTGGGCTCGTTTATGTGATCGATGGGAAAGAGAGGACTTTAAGCGTATTTCTGAAGCAACTACCAAGGCTCCAACTACTCTTCCATTCACTCATAGAGGTG
GGACTGCAACATTTTTACGCCATAAGCGGAAAAAGAAAGAAGAGGGTACGGGGATAAGTGAGATTGACTTATTTCAGATCACATATTCTAATGAAAAGAAAGGGTGGGTG
AATGCAAAAACGAAATATGATGAAATGATGGCATTAAAAACTGCTTCATCACAAGAAGGGGGTGAACCTCTTCTAGATAAGGAAATATGTGAACGGGTGTTAGGTAAGCG
ATCGGGGATGTCAAAGGACTTGGTTGGGGACCAAGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGTTGTTGCGGAGCCACAGGGCAGAGCTTTCATCATCTCCAGTCCCTGTGAACAGCTACGACTCTCCAGCTGAAGCACGAAAACACAGCGACAAACGAGTGGCACG
AGATTCAGATTGGGCTCGTTTATGTGATCGATGGGAAAGAGAGGACTTTAAGCGTATTTCTGAAGCAACTACCAAGGCTCCAACTACTCTTCCATTCACTCATAGAGGTG
GGACTGCAACATTTTTACGCCATAAGCGGAAAAAGAAAGAAGAGGGTACGGGGATAAGTGAGATTGACTTATTTCAGATCACATATTCTAATGAAAAGAAAGGGTGGGTG
AATGCAAAAACGAAATATGATGAAATGATGGCATTAAAAACTGCTTCATCACAAGAAGGGGGTGAACCTCTTCTAGATAAGGAAATATGTGAACGGGTGTTAGGTAAGCG
ATCGGGGATGTCAAAGGACTTGGTTGGGGACCAAGACTAA
Protein sequenceShow/hide protein sequence
MTLLRSHRAELSSSPVPVNSYDSPAEARKHSDKRVARDSDWARLCDRWEREDFKRISEATTKAPTTLPFTHRGGTATFLRHKRKKKEEGTGISEIDLFQITYSNEKKGWV
NAKTKYDEMMALKTASSQEGGEPLLDKEICERVLGKRSGMSKDLVGDQD