CuGenDBv2

Gene ID	HG10011687
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	type III polyketide synthase B
Genome location	Chr01:9329260..9329532
RNA-Seq Expression	HG10011687
Synteny	HG10011687
Gene Ontology terms	GO:0030639 - polyketide biosynthetic process (biological process) GO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups (molecular function)
InterPro domains	IPR011141 - Polyketide synthase, type III IPR012328 - Chalcone/stilbene synthase, C-terminal IPR016039 - Thiolase-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0057901.1 type III polyketide synthase B [Cucumis melo var. makuwa]

3.7e-12

78.43

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Query:  KRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEE
        KRLELLPEKLTAS +AL+ YGNAS NTI+YVLEYM+EESLK+KMDG + EE
Subjt:  KRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEE

KAE8652408.1 hypothetical protein Csa_014096 [Cucumis sativus]

2.8e-12

78.43

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Query:  KRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEE
        KRLELLPEKLTAS +AL+ YGNAS NTI+YVLEYM+EESLK+KM+G +IEE
Subjt:  KRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEE

XP_004138289.2 type III polyketide synthase B [Cucumis sativus]

2.8e-12

78.43

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Query:  KRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEE
        KRLELLPEKLTAS +AL+ YGNAS NTI+YVLEYM+EESLK+KM+G +IEE
Subjt:  KRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEE

XP_008453147.1 PREDICTED: type III polyketide synthase B [Cucumis melo]

3.7e-12

78.43

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Query:  KRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEE
        KRLELLPEKLTAS +AL+ YGNAS NTI+YVLEYM+EESLK+KMDG + EE
Subjt:  KRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEE

XP_038887534.1 type III polyketide synthase B [Benincasa hispida]

3.7e-12

80.39

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Query:  KRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEE
        KRLELLPEKLTAS +AL+ YGNAS NTI+YVLEYM+EESLK+KM G EIEE
Subjt:  KRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LUD0 Uncharacterized protein

1.4e-12

78.43

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Query:  KRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEE
        KRLELLPEKLTAS +AL+ YGNAS NTI+YVLEYM+EESLK+KM+G +IEE
Subjt:  KRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEE

A0A1S3BWN4 type III polyketide synthase B

1.8e-12

78.43

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Query:  KRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEE
        KRLELLPEKLTAS +AL+ YGNAS NTI+YVLEYM+EESLK+KMDG + EE
Subjt:  KRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEE

A0A5A7UWN9 Type III polyketide synthase B

1.8e-12

78.43

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Query:  KRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEE
        KRLELLPEKLTAS +AL+ YGNAS NTI+YVLEYM+EESLK+KMDG + EE
Subjt:  KRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEE

A0A5D3BHU3 Type III polyketide synthase B

1.8e-12

78.43

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Query:  KRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEE
        KRLELLPEKLTAS +AL+ YGNAS NTI+YVLEYM+EESLK+KMDG + EE
Subjt:  KRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEE

A0A6J1I2S1 type III polyketide synthase B-like

6.8e-12

80.39

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Query:  KRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEE
        KRLELLPEKLTAS +AL+ YGNAS NTI+YVLEYMVEESLK KM G E EE
Subjt:  KRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEE

SwissProt top hits

e value

%identity

Alignment

O23674 Type III polyketide synthase A

5.9e-05

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Query:  RLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEE
        +L+L  EKL +S +AL+ YGN S NTI+YV+EYM +E   LK  G+  +E
Subjt:  RLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEE

O81305 Type III polyketide synthase C

1.0e-04

45.1

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Query:  GKGKRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEE
        G   +L+L PEKL  S +AL+ YGN S NTI Y+++ + +E  K   +GEE
Subjt:  GKGKRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEE

Q8LDM2 Type III polyketide synthase B

8.8e-09

60.78

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Query:  KRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEE
        KRL L PEKL+ S +AL+ YGNAS N+I+YVLEYM+EES K++   EE  E
Subjt:  KRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEE

Arabidopsis top hits

e value

%identity

Alignment

AT1G02050.1 Chalcone and stilbene synthase family protein

4.2e-06

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Query:  RLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEE
        +L+L  EKL +S +AL+ YGN S NTI+YV+EYM +E   LK  G+  +E
Subjt:  RLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEE

AT4G00040.1 Chalcone and stilbene synthase family protein

7.2e-06

45.1

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Query:  GKGKRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEE
        G   +L+L PEKL  S +AL+ YGN S NTI Y+++ + +E  K   +GEE
Subjt:  GKGKRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEE

AT4G34850.1 Chalcone and stilbene synthase family protein

6.3e-10

60.78

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Query:  KRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEE
        KRL L PEKL+ S +AL+ YGNAS N+I+YVLEYM+EES K++   EE  E
Subjt:  KRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEE

Sequences

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CDS sequence

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ATGGGTAAGGGAAAGAGACTCGAACTGTTACCAGAGAAATTGACAGCGAGCTGGCAAGCTCTAATTGGCTATGGAAATGCAAGCGGCAACACGATCATGTACGTGCTGGA
GTACATGGTGGAAGAAAGCTTGAAGTTGAAGATGGATGGTGAGGAAATTGAGGAAAGGAATGATTTGTTTGTGGTTATAGGGAAGAGAATGAGGATGAAGGAAGAGGAGG
AAGAAGAGGAAGAGAAAGAAAAAGGGATGCCGGTGGAGGTGGATGCTGGGTAA

mRNA sequence

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Protein sequence

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MGKGKRLELLPEKLTASWQALIGYGNASGNTIMYVLEYMVEESLKLKMDGEEIEERNDLFVVIGKRMRMKEEEEEEEEKEKGMPVEVDAG

HG10011687 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome