; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10011689 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011689
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPlus3 domain-containing protein
Genome locationChr01:9349671..9350710
RNA-Seq ExpressionHG10011689
SyntenyHG10011689
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001965 - Zinc finger, PHD-type
IPR011011 - Zinc finger, FYVE/PHD-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650192.1 hypothetical protein Csa_010989 [Cucumis sativus]9.0e-2485.48Show/hide
Query:  MGRKNSKKCKTKEEIGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWICG
        MGR   KK KT EE+GDDFCF+CKDGGLLRFCDFK CLKAYHPECVGREESF ESEDRWICG
Subjt:  MGRKNSKKCKTKEEIGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWICG

XP_004133728.1 uncharacterized protein At5g08430 [Cucumis sativus]9.0e-2485.48Show/hide
Query:  MGRKNSKKCKTKEEIGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWICG
        MGR   KK KT EE+GDDFCF+CKDGGLLRFCDFK CLKAYHPECVGREESF ESEDRWICG
Subjt:  MGRKNSKKCKTKEEIGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWICG

XP_008452232.1 PREDICTED: uncharacterized protein At5g08430 isoform X2 [Cucumis melo]7.6e-2385.48Show/hide
Query:  MGRKNSKKCKTKEEIGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWICG
        MGR   KK KT EEI DDFCF+CKDGGLLRFCDFK CLKAYHPECVGREESF ESEDRWICG
Subjt:  MGRKNSKKCKTKEEIGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWICG

XP_038905175.1 uncharacterized protein At5g08430-like isoform X1 [Benincasa hispida]1.9e-2998.36Show/hide
Query:  MGRKNSKKCKTKEEIGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWIC
        MGRKNSKKCKTKEEIGDDFCF CKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWIC
Subjt:  MGRKNSKKCKTKEEIGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWIC

XP_038905176.1 uncharacterized protein At5g08430-like isoform X2 [Benincasa hispida]1.9e-2998.36Show/hide
Query:  MGRKNSKKCKTKEEIGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWIC
        MGRKNSKKCKTKEEIGDDFCF CKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWIC
Subjt:  MGRKNSKKCKTKEEIGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWIC

TrEMBL top hitse value%identityAlignment
A0A0A0L2Q0 Plus3 domain-containing protein4.3e-2485.48Show/hide
Query:  MGRKNSKKCKTKEEIGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWICG
        MGR   KK KT EE+GDDFCF+CKDGGLLRFCDFK CLKAYHPECVGREESF ESEDRWICG
Subjt:  MGRKNSKKCKTKEEIGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWICG

A0A1S3BSR8 uncharacterized protein At5g08430 isoform X13.7e-2385.48Show/hide
Query:  MGRKNSKKCKTKEEIGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWICG
        MGR   KK KT EEI DDFCF+CKDGGLLRFCDFK CLKAYHPECVGREESF ESEDRWICG
Subjt:  MGRKNSKKCKTKEEIGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWICG

A0A1S3BTE6 uncharacterized protein At5g08430 isoform X23.7e-2385.48Show/hide
Query:  MGRKNSKKCKTKEEIGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWICG
        MGR   KK KT EEI DDFCF+CKDGGLLRFCDFK CLKAYHPECVGREESF ESEDRWICG
Subjt:  MGRKNSKKCKTKEEIGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWICG

A0A5A7V4B4 SWIB domain-containing protein/Plus-3 domain-containing protein3.7e-2385.48Show/hide
Query:  MGRKNSKKCKTKEEIGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWICG
        MGR   KK KT EEI DDFCF+CKDGGLLRFCDFK CLKAYHPECVGREESF ESEDRWICG
Subjt:  MGRKNSKKCKTKEEIGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWICG

A0A6J1C6N4 uncharacterized protein At5g08430-like isoform X26.3e-2385.45Show/hide
Query:  KKCKTKEEIGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWIC
        KKCKTKEEIG+DFCF CKDGG +RFCDF+DCLKAYH +CVG+EESFVESEDRWIC
Subjt:  KKCKTKEEIGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWIC

SwissProt top hitse value%identityAlignment
O96028 Histone-lysine N-methyltransferase NSD25.1e-0639.73Show/hide
Query:  GRKNSKKCKTKEEIG------DDFCFSCKDGGLLRFCDFKDCLKAYHPECVG-REESFVESEDRW----ICGK
        G+K  KK + +   G      +D CF C DGG L  CD K C KAYH  C+G  +  F + E  W    +CGK
Subjt:  GRKNSKKCKTKEEIG------DDFCFSCKDGGLLRFCDFKDCLKAYHPECVG-REESFVESEDRW----ICGK

Q6P2L6 Histone-lysine N-methyltransferase NSD32.0e-0542.62Show/hide
Query:  KNSKKCKTKEE---IGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWIC
        K  K+ K K E   I +D+CF C DGG L  CD KDC KAYH  C+   +       +W C
Subjt:  KNSKKCKTKEE---IGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWIC

Q8BVE8 Histone-lysine N-methyltransferase NSD28.8e-0639.73Show/hide
Query:  GRKNSKKCKTKEEIG------DDFCFSCKDGGLLRFCDFKDCLKAYHPECVG-REESFVESEDRW----ICGK
        G+K  KK + +   G      +D CF C DGG L  CD K C KAYH  C+G  +  F + E  W    +CGK
Subjt:  GRKNSKKCKTKEEIG------DDFCFSCKDGGLLRFCDFKDCLKAYHPECVG-REESFVESEDRW----ICGK

Q9SD34 Zinc finger CCCH domain-containing protein 445.9e-1049.02Show/hide
Query:  KEEIGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWICG
        KE+  +D CF C DGG L  CD ++C KAYHP C+ R+E+F  +  +W CG
Subjt:  KEEIGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWICG

Q9SIV5 Zinc finger CCCH domain-containing protein 199.1e-1145.31Show/hide
Query:  RKNSKKCKTKEEIG----DDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWICG
        RK  +  KT +  G    +D CF C DGG L  CD + C KAYHP CV R+E+F +++ +W CG
Subjt:  RKNSKKCKTKEEIG----DDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWICG

Arabidopsis top hitse value%identityAlignment
AT2G16485.1 nucleic acid binding;zinc ion binding;DNA binding6.4e-1245.31Show/hide
Query:  RKNSKKCKTKEEIG----DDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWICG
        RK  +  KT +  G    +D CF C DGG L  CD + C KAYHP CV R+E+F +++ +W CG
Subjt:  RKNSKKCKTKEEIG----DDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWICG

AT2G18090.1 PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein4.2e-1143.55Show/hide
Query:  MGRKNSKKCKTKEEIGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWICG
        + + +S     K    +D CF C DGG L  CD + C KAYHP CV R E+F  S  +W CG
Subjt:  MGRKNSKKCKTKEEIGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWICG

AT3G51120.1 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding4.2e-1149.02Show/hide
Query:  KEEIGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWICG
        KE+  +D CF C DGG L  CD ++C KAYHP C+ R+E+F  +  +W CG
Subjt:  KEEIGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWICG

AT5G63700.1 zinc ion binding;DNA binding1.6e-1053.33Show/hide
Query:  DDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWIC
        +D+CF CKDGG L  CDFKDC K YH  CV ++ S  ++ D +IC
Subjt:  DDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWIC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGAAAGAATTCAAAGAAATGCAAAACGAAAGAAGAAATCGGAGACGATTTTTGCTTCAGTTGTAAAGATGGAGGACTGCTCAGATTCTGCGACTTCAAAGATTG
CCTTAAAGCGTATCACCCTGAGTGTGTTGGAAGGGAAGAATCTTTTGTGGAGTCTGAAGATCGTTGGATCTGTGGTAAGATGCTAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAGAAAGAATTCAAAGAAATGCAAAACGAAAGAAGAAATCGGAGACGATTTTTGCTTCAGTTGTAAAGATGGAGGACTGCTCAGATTCTGCGACTTCAAAGATTG
CCTTAAAGCGTATCACCCTGAGTGTGTTGGAAGGGAAGAATCTTTTGTGGAGTCTGAAGATCGTTGGATCTGTGGTAAGATGCTAATGTGA
Protein sequenceShow/hide protein sequence
MGRKNSKKCKTKEEIGDDFCFSCKDGGLLRFCDFKDCLKAYHPECVGREESFVESEDRWICGKMLM