; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10011705 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011705
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionReverse transcriptase domain, reverse transcriptase zinc-binding domain protein
Genome locationChr01:9634245..9634730
RNA-Seq ExpressionHG10011705
SyntenyHG10011705
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AGC78907.1 hypothetical protein [Vicia faba]5.4e-2274.42Show/hide
Query:  MTNRVRHLATSARKRNVVLVEAFFPLLVKGARDVRGVRALRTTTGLVVLGRIPLLNIRDRGKVAGPIISKGLSKENRTACAFSLLP
        MTNRVRHLA SARKRNVVLVEA FPLLV GARDVRGVRA RTTTGLVVLGRIPLLNIRDRG   G    KG  K  R   +F + P
Subjt:  MTNRVRHLATSARKRNVVLVEAFFPLLVKGARDVRGVRALRTTTGLVVLGRIPLLNIRDRGKVAGPIISKGLSKENRTACAFSLLP

GEW90610.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 [Tanacetum cinerariifolium]1.5e-1686.44Show/hide
Query:  LVHARANEHRPQQQGTMTNRVRHLATSARKRNVVLVEAFFPLLVKGARDVRGVRALRTT
        L+H RANEHR QQQ TMTNRVRHLATSARKRNVVLVEAFF LLVKGA DVR VRA RTT
Subjt:  LVHARANEHRPQQQGTMTNRVRHLATSARKRNVVLVEAFFPLLVKGARDVRGVRALRTT

GEZ75583.1 reverse transcriptase domain, reverse transcriptase zinc-binding domain protein [Tanacetum cinerariifolium]5.2e-2591.55Show/hide
Query:  DAPRGILSLFVGLVHARANEHRPQQQGTMTNRVRHLATSARKRNVVLVEAFFPLLVKGARDVRGVRALRTT
        +APRGILSLFVGLVHARANEHRPQQQ TMTNRVRHLATSARKRNVVL EAFF LLVKGARDVRGVRA  TT
Subjt:  DAPRGILSLFVGLVHARANEHRPQQQGTMTNRVRHLATSARKRNVVLVEAFFPLLVKGARDVRGVRALRTT

PNX71049.1 hypothetical protein L195_g058006 [Trifolium pratense]2.7e-1388.68Show/hide
Query:  RGILSLFVGLVHARANEHRPQQQGTMTNRVRHLATSARKRNVVLVEAFFPLLV
        RGILSLFVGL   RANEH PQQQGTMTNRVRHLA SARKRNVVLVEAF PLLV
Subjt:  RGILSLFVGLVHARANEHRPQQQGTMTNRVRHLATSARKRNVVLVEAFFPLLV

RDY14270.1 hypothetical protein CR513_00684, partial [Mucuna pruriens]1.4e-2594.52Show/hide
Query:  MTNRVRHLATSARKRNVVLVEAFFPLL---VKGARDVRGVRALRTTTGLVVLGRIPLLNIRDRGKVAGPIISK
        MTNRVRHLATSARKRNVVLVEAFFPLL   VKGARDVRGVRA RTTTGLVVLGRIPLLNIRDRGKVAGPIISK
Subjt:  MTNRVRHLATSARKRNVVLVEAFFPLL---VKGARDVRGVRALRTTTGLVVLGRIPLLNIRDRGKVAGPIISK

TrEMBL top hitse value%identityAlignment
A0A2K3KXP4 Uncharacterized protein1.3e-1388.68Show/hide
Query:  RGILSLFVGLVHARANEHRPQQQGTMTNRVRHLATSARKRNVVLVEAFFPLLV
        RGILSLFVGL   RANEH PQQQGTMTNRVRHLA SARKRNVVLVEAF PLLV
Subjt:  RGILSLFVGLVHARANEHRPQQQGTMTNRVRHLATSARKRNVVLVEAFFPLLV

A0A371IGX6 Uncharacterized protein (Fragment)6.6e-2694.52Show/hide
Query:  MTNRVRHLATSARKRNVVLVEAFFPLL---VKGARDVRGVRALRTTTGLVVLGRIPLLNIRDRGKVAGPIISK
        MTNRVRHLATSARKRNVVLVEAFFPLL   VKGARDVRGVRA RTTTGLVVLGRIPLLNIRDRGKVAGPIISK
Subjt:  MTNRVRHLATSARKRNVVLVEAFFPLL---VKGARDVRGVRALRTTTGLVVLGRIPLLNIRDRGKVAGPIISK

A0A699ITA5 Reverse transcriptase domain, reverse transcriptase zinc-binding domain protein2.5e-2591.55Show/hide
Query:  DAPRGILSLFVGLVHARANEHRPQQQGTMTNRVRHLATSARKRNVVLVEAFFPLLVKGARDVRGVRALRTT
        +APRGILSLFVGLVHARANEHRPQQQ TMTNRVRHLATSARKRNVVL EAFF LLVKGARDVRGVRA  TT
Subjt:  DAPRGILSLFVGLVHARANEHRPQQQGTMTNRVRHLATSARKRNVVLVEAFFPLLVKGARDVRGVRALRTT

A0A6J5W1P4 Uncharacterized protein4.6e-1187.23Show/hide
Query:  MTNRVRHLATSARKRNVVLVEAFFPLLVKGARDVRGVRALRTTTGLV
        MTNR+RHLATSA KRNVVLVEAFFPLLVKGA DVRGV A RTTT LV
Subjt:  MTNRVRHLATSARKRNVVLVEAFFPLLVKGARDVRGVRALRTTTGLV

R4IUB3 Uncharacterized protein2.6e-2274.42Show/hide
Query:  MTNRVRHLATSARKRNVVLVEAFFPLLVKGARDVRGVRALRTTTGLVVLGRIPLLNIRDRGKVAGPIISKGLSKENRTACAFSLLP
        MTNRVRHLA SARKRNVVLVEA FPLLV GARDVRGVRA RTTTGLVVLGRIPLLNIRDRG   G    KG  K  R   +F + P
Subjt:  MTNRVRHLATSARKRNVVLVEAFFPLLVKGARDVRGVRALRTTTGLVVLGRIPLLNIRDRGKVAGPIISKGLSKENRTACAFSLLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCCACAATCTGAATCAAAGAGGATGGGTCAAGGAGAAGTTCGGGACGAAACCAGAGTGGATCTGCGGCAAAGCGGTTCCCTTCATACAGCTCGAATCATTCTCAGA
TGCCCCGAGAGGCATCCTTTCCTTGTTTGTTGGGTTGGTTCACGCGCGCGCAAACGAGCACCGGCCGCAACAGCAGGGAACTATGACCAATAGAGTCAGACACTTAGCTA
CATCCGCACGCAAAAGGAATGTGGTTCTGGTTGAGGCTTTCTTTCCTTTATTAGTAAAGGGGGCGCGGGACGTTCGCGGAGTCCGTGCCTTACGTACCACCACGGGACTG
GTCGTTCTTGGGCGGATCCCGCTCCTAAACATAAGGGATAGGGGGAAGGTGGCCGGGCCTATCATATCAAAAGGGTTGTCGAAAGAGAACCGTACCGCTTGTGCGTTCTC
TCTCTTGCCTGTGTGTACGTACTTTAAGCAGCCTTTCCGTAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCCACAATCTGAATCAAAGAGGATGGGTCAAGGAGAAGTTCGGGACGAAACCAGAGTGGATCTGCGGCAAAGCGGTTCCCTTCATACAGCTCGAATCATTCTCAGA
TGCCCCGAGAGGCATCCTTTCCTTGTTTGTTGGGTTGGTTCACGCGCGCGCAAACGAGCACCGGCCGCAACAGCAGGGAACTATGACCAATAGAGTCAGACACTTAGCTA
CATCCGCACGCAAAAGGAATGTGGTTCTGGTTGAGGCTTTCTTTCCTTTATTAGTAAAGGGGGCGCGGGACGTTCGCGGAGTCCGTGCCTTACGTACCACCACGGGACTG
GTCGTTCTTGGGCGGATCCCGCTCCTAAACATAAGGGATAGGGGGAAGGTGGCCGGGCCTATCATATCAAAAGGGTTGTCGAAAGAGAACCGTACCGCTTGTGCGTTCTC
TCTCTTGCCTGTGTGTACGTACTTTAAGCAGCCTTTCCGTAGATAA
Protein sequenceShow/hide protein sequence
MPHNLNQRGWVKEKFGTKPEWICGKAVPFIQLESFSDAPRGILSLFVGLVHARANEHRPQQQGTMTNRVRHLATSARKRNVVLVEAFFPLLVKGARDVRGVRALRTTTGL
VVLGRIPLLNIRDRGKVAGPIISKGLSKENRTACAFSLLPVCTYFKQPFRR