; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10011716 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011716
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionDExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like
Genome locationChr01:9852507..9854386
RNA-Seq ExpressionHG10011716
SyntenyHG10011716
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034595.1 DExH-box ATP-dependent RNA helicase DExH5 [Cucumis melo var. makuwa]3.5e-3961.97Show/hide
Query:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFSQNHNDHLVIIRAYGRQKEVEKNFGGYDIYWK
        D S+NL V GRYLTML ME                 PILTVV  L+VRDPF TP +KKD  E AK QFSQ+H+DHL IIRAYG  KE E+N+GGYD  WK
Subjt:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFSQNHNDHLVIIRAYGRQKEVEKNFGGYDIYWK

Query:  NILSVQLVKTIDSLRKEFVSLLKDIGLVNGYLNTYDAWSLDE
        N LS+Q +K IDSLRKEF SLL+D GLV+GY +TY+AWSLDE
Subjt:  NILSVQLVKTIDSLRKEFVSLLKDIGLVNGYLNTYDAWSLDE

TYK09146.1 DExH-box ATP-dependent RNA helicase DExH5 [Cucumis melo var. makuwa]3.5e-3961.97Show/hide
Query:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFSQNHNDHLVIIRAYGRQKEVEKNFGGYDIYWK
        D S+NL V GRYLTML ME                 PILTVV  L+VRDPF TP +KKD  E AK QFSQ+H+DHL IIRAYG  KE E+N+GGYD  WK
Subjt:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFSQNHNDHLVIIRAYGRQKEVEKNFGGYDIYWK

Query:  NILSVQLVKTIDSLRKEFVSLLKDIGLVNGYLNTYDAWSLDE
        N LS+Q +K IDSLRKEF SLL+D GLV+GY +TY+AWSLDE
Subjt:  NILSVQLVKTIDSLRKEFVSLLKDIGLVNGYLNTYDAWSLDE

XP_008446652.1 PREDICTED: DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1 [Cucumis melo]3.5e-3961.97Show/hide
Query:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFSQNHNDHLVIIRAYGRQKEVEKNFGGYDIYWK
        D S+NL V GRYLTML ME                 PILTVV  L+VRDPF TP +KKD  E AK QFSQ+H+DHL IIRAYG  KE E+N+GGYD  WK
Subjt:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFSQNHNDHLVIIRAYGRQKEVEKNFGGYDIYWK

Query:  NILSVQLVKTIDSLRKEFVSLLKDIGLVNGYLNTYDAWSLDE
        N LS+Q +K IDSLRKEF SLL+D GLV+GY +TY+AWSLDE
Subjt:  NILSVQLVKTIDSLRKEFVSLLKDIGLVNGYLNTYDAWSLDE

XP_008446653.1 PREDICTED: DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X2 [Cucumis melo]3.5e-3961.97Show/hide
Query:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFSQNHNDHLVIIRAYGRQKEVEKNFGGYDIYWK
        D S+NL V GRYLTML ME                 PILTVV  L+VRDPF TP +KKD  E AK QFSQ+H+DHL IIRAYG  KE E+N+GGYD  WK
Subjt:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFSQNHNDHLVIIRAYGRQKEVEKNFGGYDIYWK

Query:  NILSVQLVKTIDSLRKEFVSLLKDIGLVNGYLNTYDAWSLDE
        N LS+Q +K IDSLRKEF SLL+D GLV+GY +TY+AWSLDE
Subjt:  NILSVQLVKTIDSLRKEFVSLLKDIGLVNGYLNTYDAWSLDE

XP_038892223.1 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial [Benincasa hispida]4.1e-4064.08Show/hide
Query:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFSQNHNDHLVIIRAYGRQKEVEKNFGGYDIYWK
        D S+NL V GRYLTML ME                 PILTVV  L+VRDPF TP +KKDV E AK QFSQ+H+DHL IIRAYG  KE E+NFGGYD  WK
Subjt:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFSQNHNDHLVIIRAYGRQKEVEKNFGGYDIYWK

Query:  NILSVQLVKTIDSLRKEFVSLLKDIGLVNGYLNTYDAWSLDE
        N LSVQ +K IDSLRKEF SLL+D GLV+GY +TY+AWSLDE
Subjt:  NILSVQLVKTIDSLRKEFVSLLKDIGLVNGYLNTYDAWSLDE

TrEMBL top hitse value%identityAlignment
A0A0A0KWI1 Uncharacterized protein2.2e-3961.27Show/hide
Query:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFSQNHNDHLVIIRAYGRQKEVEKNFGGYDIYWK
        D S+NL V GRYLTML ME                 PI+TVV  L+VRDPF TP +KKD  E AK QFSQ+H+DHL IIRAYG  KE E+N+GGYD  WK
Subjt:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFSQNHNDHLVIIRAYGRQKEVEKNFGGYDIYWK

Query:  NILSVQLVKTIDSLRKEFVSLLKDIGLVNGYLNTYDAWSLDE
        N LS+Q +K IDSLRKEF SLL+D GLV+GY +TY+AWSLDE
Subjt:  NILSVQLVKTIDSLRKEFVSLLKDIGLVNGYLNTYDAWSLDE

A0A1S3BF36 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X11.7e-3961.97Show/hide
Query:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFSQNHNDHLVIIRAYGRQKEVEKNFGGYDIYWK
        D S+NL V GRYLTML ME                 PILTVV  L+VRDPF TP +KKD  E AK QFSQ+H+DHL IIRAYG  KE E+N+GGYD  WK
Subjt:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFSQNHNDHLVIIRAYGRQKEVEKNFGGYDIYWK

Query:  NILSVQLVKTIDSLRKEFVSLLKDIGLVNGYLNTYDAWSLDE
        N LS+Q +K IDSLRKEF SLL+D GLV+GY +TY+AWSLDE
Subjt:  NILSVQLVKTIDSLRKEFVSLLKDIGLVNGYLNTYDAWSLDE

A0A1S3BFL6 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X21.7e-3961.97Show/hide
Query:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFSQNHNDHLVIIRAYGRQKEVEKNFGGYDIYWK
        D S+NL V GRYLTML ME                 PILTVV  L+VRDPF TP +KKD  E AK QFSQ+H+DHL IIRAYG  KE E+N+GGYD  WK
Subjt:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFSQNHNDHLVIIRAYGRQKEVEKNFGGYDIYWK

Query:  NILSVQLVKTIDSLRKEFVSLLKDIGLVNGYLNTYDAWSLDE
        N LS+Q +K IDSLRKEF SLL+D GLV+GY +TY+AWSLDE
Subjt:  NILSVQLVKTIDSLRKEFVSLLKDIGLVNGYLNTYDAWSLDE

A0A5A7SZF7 DExH-box ATP-dependent RNA helicase DExH51.7e-3961.97Show/hide
Query:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFSQNHNDHLVIIRAYGRQKEVEKNFGGYDIYWK
        D S+NL V GRYLTML ME                 PILTVV  L+VRDPF TP +KKD  E AK QFSQ+H+DHL IIRAYG  KE E+N+GGYD  WK
Subjt:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFSQNHNDHLVIIRAYGRQKEVEKNFGGYDIYWK

Query:  NILSVQLVKTIDSLRKEFVSLLKDIGLVNGYLNTYDAWSLDE
        N LS+Q +K IDSLRKEF SLL+D GLV+GY +TY+AWSLDE
Subjt:  NILSVQLVKTIDSLRKEFVSLLKDIGLVNGYLNTYDAWSLDE

A0A5D3CFK3 DExH-box ATP-dependent RNA helicase DExH51.7e-3961.97Show/hide
Query:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFSQNHNDHLVIIRAYGRQKEVEKNFGGYDIYWK
        D S+NL V GRYLTML ME                 PILTVV  L+VRDPF TP +KKD  E AK QFSQ+H+DHL IIRAYG  KE E+N+GGYD  WK
Subjt:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFSQNHNDHLVIIRAYGRQKEVEKNFGGYDIYWK

Query:  NILSVQLVKTIDSLRKEFVSLLKDIGLVNGYLNTYDAWSLDE
        N LS+Q +K IDSLRKEF SLL+D GLV+GY +TY+AWSLDE
Subjt:  NILSVQLVKTIDSLRKEFVSLLKDIGLVNGYLNTYDAWSLDE

SwissProt top hitse value%identityAlignment
F4HYJ7 DExH-box ATP-dependent RNA helicase DExH34.0e-2242.31Show/hide
Query:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFS-QNHNDHLVIIRAYGRQKEVEKNFGGYDIYW
        D  +NL   G+ L+ML +E                 P++TVV  L+VRDPF  PF KKD+ ETA+ +FS ++++DHL ++RAY   K+ E+   GYD  W
Subjt:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFS-QNHNDHLVIIRAYGRQKEVEKNFGGYDIYW

Query:  KNILSVQLVKTIDSLRKEFVSLLKDIGLVN
        KN LS Q +K +DS+RK+F +LLK+  L++
Subjt:  KNILSVQLVKTIDSLRKEFVSLLKDIGLVN

F4ILR7 DExH-box ATP-dependent RNA helicase DExH17.9e-1030.28Show/hide
Query:  MEPILTVVVRLNVRDPFPTPFKKKDVVETAKFQFS-QNHNDHLVIIRAYGRQKEVEKNFGGYDIYWKNILSVQLVKTIDSLRKEFVSLLKDIGLVN-GYL
        + P LT+   L  R PF  P  +K+  + AK  F+  + +DH+ +++AY   ++ ++     D  W+N LS   ++ ++ +R +F+ LL DIG V+    
Subjt:  MEPILTVVVRLNVRDPFPTPFKKKDVVETAKFQFS-QNHNDHLVIIRAYGRQKEVEKNFGGYDIYWKNILSVQLVKTIDSLRKEFVSLLKDIGLVN-GYL

Query:  NTYDAWSLD
        N Y+ +S D
Subjt:  NTYDAWSLD

F4IM84 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial7.1e-2749.23Show/hide
Query:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFSQNHNDHLVIIRAYGRQKEVEKNFGGYDIYWK
        D +++L   GRYL+ L ME                 PILTV   L+VRDPF TP  KKD+ E AK QFS++H+DHL ++RAY   K+ E+    YD  WK
Subjt:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFSQNHNDHLVIIRAYGRQKEVEKNFGGYDIYWK

Query:  NILSVQLVKTIDSLRKEFVSLLKDIGLVNG
        N LS+Q ++ IDSLRKEF SLLKD GL++G
Subjt:  NILSVQLVKTIDSLRKEFVSLLKDIGLVNG

Arabidopsis top hitse value%identityAlignment
AT1G48650.1 DEA(D/H)-box RNA helicase family protein2.9e-2342.31Show/hide
Query:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFS-QNHNDHLVIIRAYGRQKEVEKNFGGYDIYW
        D  +NL   G+ L+ML +E                 P++TVV  L+VRDPF  PF KKD+ ETA+ +FS ++++DHL ++RAY   K+ E+   GYD  W
Subjt:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFS-QNHNDHLVIIRAYGRQKEVEKNFGGYDIYW

Query:  KNILSVQLVKTIDSLRKEFVSLLKDIGLVN
        KN LS Q +K +DS+RK+F +LLK+  L++
Subjt:  KNILSVQLVKTIDSLRKEFVSLLKDIGLVN

AT1G48650.2 DEA(D/H)-box RNA helicase family protein2.9e-2342.31Show/hide
Query:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFS-QNHNDHLVIIRAYGRQKEVEKNFGGYDIYW
        D  +NL   G+ L+ML +E                 P++TVV  L+VRDPF  PF KKD+ ETA+ +FS ++++DHL ++RAY   K+ E+   GYD  W
Subjt:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFS-QNHNDHLVIIRAYGRQKEVEKNFGGYDIYW

Query:  KNILSVQLVKTIDSLRKEFVSLLKDIGLVN
        KN LS Q +K +DS+RK+F +LLK+  L++
Subjt:  KNILSVQLVKTIDSLRKEFVSLLKDIGLVN

AT2G01130.1 DEA(D/H)-box RNA helicase family protein5.0e-2849.23Show/hide
Query:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFSQNHNDHLVIIRAYGRQKEVEKNFGGYDIYWK
        D +++L   GRYL+ L ME                 PILTV   L+VRDPF TP  KKD+ E AK QFS++H+DHL ++RAY   K+ E+    YD  WK
Subjt:  DRSKNLNVFGRYLTMLSME-----------------PILTVVVRLNVRDPFPTPFKKKDVVETAKFQFSQNHNDHLVIIRAYGRQKEVEKNFGGYDIYWK

Query:  NILSVQLVKTIDSLRKEFVSLLKDIGLVNG
        N LS+Q ++ IDSLRKEF SLLKD GL++G
Subjt:  NILSVQLVKTIDSLRKEFVSLLKDIGLVNG

AT2G35920.1 RNA helicase family protein5.6e-1130.28Show/hide
Query:  MEPILTVVVRLNVRDPFPTPFKKKDVVETAKFQFS-QNHNDHLVIIRAYGRQKEVEKNFGGYDIYWKNILSVQLVKTIDSLRKEFVSLLKDIGLVN-GYL
        + P LT+   L  R PF  P  +K+  + AK  F+  + +DH+ +++AY   ++ ++     D  W+N LS   ++ ++ +R +F+ LL DIG V+    
Subjt:  MEPILTVVVRLNVRDPFPTPFKKKDVVETAKFQFS-QNHNDHLVIIRAYGRQKEVEKNFGGYDIYWKNILSVQLVKTIDSLRKEFVSLLKDIGLVN-GYL

Query:  NTYDAWSLD
        N Y+ +S D
Subjt:  NTYDAWSLD

AT5G04895.1 DEA(D/H)-box RNA helicase family protein8.0e-1836.92Show/hide
Query:  DRSKNLNVFGRYLTMLSM-----------------EPILTVVVRLNVRDPFPTPFKKKDVVETAKFQFS-QNHNDHLVIIRAYGRQKEVEKNFGGYDIYW
        D  +NL   G+ L++L +                 +PILT+V  L+VRDPF  P  KKD+  +AK +FS ++++DH+ ++RA+   K+ E+    Y+  W
Subjt:  DRSKNLNVFGRYLTMLSM-----------------EPILTVVVRLNVRDPFPTPFKKKDVVETAKFQFS-QNHNDHLVIIRAYGRQKEVEKNFGGYDIYW

Query:  KNILSVQLVKTIDSLRKEFVSLLKDIGLVN
        +N LS Q ++ I SLRK+F  +LK+ GLV+
Subjt:  KNILSVQLVKTIDSLRKEFVSLLKDIGLVN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCAAGATAGGAGTAAAAATCTTAATGTCTTCGGTCGTTATTTGACTATGCTCTCAATGGAACCAATTTTGACCGTTGTTGTCCGTCTCAATGTGAGAGACCCTTT
TCCAACGCCATTTAAGAAGAAGGACGTTGTAGAGACTGCAAAATTCCAATTTTCACAAAATCATAATGATCACCTTGTTATTATCCGGGCCTATGGGAGACAGAAAGAAG
TTGAGAAGAACTTTGGTGGATATGACATCTATTGGAAGAACATTCTTTCTGTACAATTAGTAAAGACTATTGATTCACTAAGGAAGGAGTTCGTTTCTTTGCTTAAAGAT
ATTGGCTTGGTCAATGGGTATTTGAATACCTACGACGCTTGGAGTCTTGATGAACTTGATGAAAATTTTATGTCTTGGAGTTTTTTTCATAATATTTTTGCTCAAGATGT
AGGAGTTGCAGTCCTTACAGCTGCAGGGGTTGCAGCTGCACTTGTCATTGTGCTCGGCCGCTGGGGCGTCCATAACTATGGCGTCAAACGAGCTGCAGAACCAAGAGATT
TTTCGTTAGATGCCAGGTTCTGTGTAAAACCCCTTTTTCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTGCAAGATAGGAGTAAAAATCTTAATGTCTTCGGTCGTTATTTGACTATGCTCTCAATGGAACCAATTTTGACCGTTGTTGTCCGTCTCAATGTGAGAGACCCTTT
TCCAACGCCATTTAAGAAGAAGGACGTTGTAGAGACTGCAAAATTCCAATTTTCACAAAATCATAATGATCACCTTGTTATTATCCGGGCCTATGGGAGACAGAAAGAAG
TTGAGAAGAACTTTGGTGGATATGACATCTATTGGAAGAACATTCTTTCTGTACAATTAGTAAAGACTATTGATTCACTAAGGAAGGAGTTCGTTTCTTTGCTTAAAGAT
ATTGGCTTGGTCAATGGGTATTTGAATACCTACGACGCTTGGAGTCTTGATGAACTTGATGAAAATTTTATGTCTTGGAGTTTTTTTCATAATATTTTTGCTCAAGATGT
AGGAGTTGCAGTCCTTACAGCTGCAGGGGTTGCAGCTGCACTTGTCATTGTGCTCGGCCGCTGGGGCGTCCATAACTATGGCGTCAAACGAGCTGCAGAACCAAGAGATT
TTTCGTTAGATGCCAGGTTCTGTGTAAAACCCCTTTTTCAATAA
Protein sequenceShow/hide protein sequence
MLQDRSKNLNVFGRYLTMLSMEPILTVVVRLNVRDPFPTPFKKKDVVETAKFQFSQNHNDHLVIIRAYGRQKEVEKNFGGYDIYWKNILSVQLVKTIDSLRKEFVSLLKD
IGLVNGYLNTYDAWSLDELDENFMSWSFFHNIFAQDVGVAVLTAAGVAAALVIVLGRWGVHNYGVKRAAEPRDFSLDARFCVKPLFQ