; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10011717 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011717
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRING-type domain-containing protein
Genome locationChr01:9868493..9869065
RNA-Seq ExpressionHG10011717
SyntenyHG10011717
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33914.1 hypothetical protein [Cucumis melo subsp. melo]4.1e-6181.13Show/hide
Query:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD
        MIPQAL+VPQSNPPPSILPFLTAFS+V V+FISIIIFSVVASFAIIIFIY+IC+YLIG T+LD H  DLEAGE  ENQRMI R RIL++HHQTS+ HGRD
Subjt:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD

Query:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPV
         MER ESN WRE +ERT+M+EKV APVSYGSSE VAKCIDCAICLEDFENGELCQ FP+
Subjt:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPV

KAA0060638.1 putative RING-H2 finger protein ATL19 [Cucumis melo var. makuwa]7.1e-8283.25Show/hide
Query:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD
        MIPQAL+VPQSNPPPSILPFLTAFS+V V+FISIIIFSVVASFAIIIFIY+IC+YLIG T+LD H  DLEAGE  ENQRMI R RIL++HHQTS+ HGRD
Subjt:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD

Query:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICLVSIVNDNC
         MER ESN WRE +ERT+M+EKV APVSYGSSE VAKCIDCAICLEDFENGELCQ FPVCNHIFHYSCIQHWLKKNMTCPIC  SIVND C
Subjt:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICLVSIVNDNC

KAG6600727.1 putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. sororia]6.1e-5763.32Show/hide
Query:  MIPQAL-SVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGR
        MIPQAL +VPQSNPPPS LPFLTAFS+V V+ ISI+IFS++ASF+IIIFI+V+CQYLIG TNLDGH  D+EAGER +NQ    RGR LVS          
Subjt:  MIPQAL-SVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGR

Query:  DMERFESNAWREALERTV---------MVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICLVSIVNDN
           R+ESN WREALERT+         +V K+   V YG SE  AK  DCAICLE+FENGE CQIF VC HIFHYSCIQ WL++NMTCPIC   I N N
Subjt:  DMERFESNAWREALERTV---------MVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICLVSIVNDN

TYK02232.1 putative RING-H2 finger protein ATL19 [Cucumis melo var. makuwa]1.8e-6181.76Show/hide
Query:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD
        MIPQAL+VPQSNPPPSILPFLTAFS+V V+FISIIIFSVVASFAIIIFIY+IC+YLIG T+LD H  DLEAGE  ENQRMI R RIL++HHQTS+ HGRD
Subjt:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD

Query:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPV
         MER ESN WRE +ERT+M+EKV APVSYGSSE VAKCIDCAICLEDFENGELCQ FPV
Subjt:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPV

XP_011652743.1 uncharacterized protein LOC105435076 [Cucumis sativus]1.0e-5953.21Show/hide
Query:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD
        MIPQAL+VPQSNPPPSILPFLTAFS+V V+FI+IIIFSVVASFAII+ IYVIC+YLIG T+LDGH  +LEAGE  ENQ MI R RIL++HHQTS+ HGRD
Subjt:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD

Query:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQ---------------------------------------------
         MER ESNAWRE +ERT+M+EKV APVSYGSSEA  KCIDCAICLEDFENGELCQ                                             
Subjt:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQ---------------------------------------------

Query:  --------------------------------------IFPVCNHIFHYSCIQHWLKKNMTCPIC
                                              +FP C HIFH  CI +WL+ N TCPIC
Subjt:  --------------------------------------IFPVCNHIFHYSCIQHWLKKNMTCPIC

TrEMBL top hitse value%identityAlignment
A0A0A0L6M6 RING-type domain-containing protein1.2e-7982.01Show/hide
Query:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD
        MIPQAL+VPQSNPPPSILPFLTAFS+V V+FI+IIIFSVVASFAII+ IYVIC+YLIG T+LDGH  +LEAGE  ENQ MI R RIL++HHQTS+ HGRD
Subjt:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD

Query:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICLVSIVND
         MER ESNAWRE +ERT+M+EKV APVSYGSSEA  KCIDCAICLEDFENGELCQ FPVCNHIFHYSCIQHWLKKNMTCPIC  SIVND
Subjt:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICLVSIVND

A0A5A7UZF7 Putative RING-H2 finger protein ATL193.5e-8283.25Show/hide
Query:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD
        MIPQAL+VPQSNPPPSILPFLTAFS+V V+FISIIIFSVVASFAIIIFIY+IC+YLIG T+LD H  DLEAGE  ENQRMI R RIL++HHQTS+ HGRD
Subjt:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD

Query:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICLVSIVNDNC
         MER ESN WRE +ERT+M+EKV APVSYGSSE VAKCIDCAICLEDFENGELCQ FPVCNHIFHYSCIQHWLKKNMTCPIC  SIVND C
Subjt:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICLVSIVNDNC

A0A5D3BTV2 Putative RING-H2 finger protein ATL198.9e-6281.76Show/hide
Query:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD
        MIPQAL+VPQSNPPPSILPFLTAFS+V V+FISIIIFSVVASFAIIIFIY+IC+YLIG T+LD H  DLEAGE  ENQRMI R RIL++HHQTS+ HGRD
Subjt:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD

Query:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPV
         MER ESN WRE +ERT+M+EKV APVSYGSSE VAKCIDCAICLEDFENGELCQ FPV
Subjt:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPV

A0A7N2L6L4 RING-type domain-containing protein3.6e-2337.82Show/hide
Query:  MIPQALSVPQSNPPP--SILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQ-RMIPRGRILVSHHQTSTDH
        M+PQA   P   PPP   IL F+    +  + ++ II+ SVV    I++ I  IC     P+N +    DLE GER+ +Q   IP     + + +     
Subjt:  MIPQALSVPQSNPPP--SILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQ-RMIPRGRILVSHHQTSTDH

Query:  GRDMERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICLVSIVNDNC
           +E     + R   E+   +EK+   V+YGS E  + C  C ICLEDF+NG+ CQ+FP CNH+FH +CI +WLKK+ TCPIC V ++  +C
Subjt:  GRDMERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICLVSIVNDNC

E5GBS2 Uncharacterized protein2.0e-6181.13Show/hide
Query:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD
        MIPQAL+VPQSNPPPSILPFLTAFS+V V+FISIIIFSVVASFAIIIFIY+IC+YLIG T+LD H  DLEAGE  ENQRMI R RIL++HHQTS+ HGRD
Subjt:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD

Query:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPV
         MER ESN WRE +ERT+M+EKV APVSYGSSE VAKCIDCAICLEDFENGELCQ FP+
Subjt:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPV

SwissProt top hitse value%identityAlignment
Q67YI6 RING-H2 finger protein ATL651.7e-0942.59Show/hide
Query:  AVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICLVSIV
        + A C DCA+CL +FE G+  +  P+C H FH  CI  WL+ +  CP+C  +I+
Subjt:  AVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICLVSIV

Q8W571 RING-H2 finger protein ATL321.7e-0935.11Show/hide
Query:  SHHQTSTDHGRDMERFESNAWREALERTVMVE-KVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPIC
        S+  +ST + R+    + ++ R  L+  V+    V A  S   S+  +K ++CAICL + E+ E  ++ P+CNH+FH  CI  WL  + TCP+C
Subjt:  SHHQTSTDHGRDMERFESNAWREALERTVMVE-KVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPIC

Q9C919 Putative RING-H2 finger protein ATL193.1e-1131.11Show/hide
Query:  SNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGP---TNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRDMERFESN
        S+     +  ++   +   + + I++  ++A+ A+I+ IYVI   ++ P   T LD    DLE G     QR   R RI+  H   ST  G  +  FE  
Subjt:  SNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGP---TNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRDMERFESN

Query:  AWREALERTVMVEKVTAPVSYG------SSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPIC
          +  L+++V +E +   +  G        E   +  +CAICL  +   E C++FPVC HI+H  CI  WLK ++TCP C
Subjt:  AWREALERTVMVEKVTAPVSYG------SSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPIC

Q9LF64 RING-H2 finger protein ATL523.4e-1032.41Show/hide
Query:  HHQTSTDHGRDM----ERFESNAWREALE----RTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPIC
        HHQTS+    ++    E F S+  R +         M++ +T    Y S +      DC++CL +FE  E  ++ P CNH FH  CI  WLK +  CP+C
Subjt:  HHQTSTDHGRDM----ERFESNAWREALE----RTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPIC

Query:  LVSIVNDN
           +   N
Subjt:  LVSIVNDN

Q9LZV8 RING-H2 finger protein ATL744.4e-1045.76Show/hide
Query:  YGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICLVSIV
        YGS E      +CAICL +F +GE  ++ P CNH FH SCI  WL  + +CP C  S++
Subjt:  YGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICLVSIV

Arabidopsis top hitse value%identityAlignment
AT1G53010.1 RING/U-box superfamily protein2.2e-1231.11Show/hide
Query:  SNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGP---TNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRDMERFESN
        S+     +  ++   +   + + I++  ++A+ A+I+ IYVI   ++ P   T LD    DLE G     QR   R RI+  H   ST  G  +  FE  
Subjt:  SNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGP---TNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRDMERFESN

Query:  AWREALERTVMVEKVTAPVSYG------SSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPIC
          +  L+++V +E +   +  G        E   +  +CAICL  +   E C++FPVC HI+H  CI  WLK ++TCP C
Subjt:  AWREALERTVMVEKVTAPVSYG------SSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPIC

AT3G18930.1 RING/U-box superfamily protein1.2e-1042.59Show/hide
Query:  AVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICLVSIV
        + A C DCA+CL +FE G+  +  P+C H FH  CI  WL+ +  CP+C  +I+
Subjt:  AVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICLVSIV

AT3G18930.2 RING/U-box superfamily protein1.2e-1042.59Show/hide
Query:  AVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICLVSIV
        + A C DCA+CL +FE G+  +  P+C H FH  CI  WL+ +  CP+C  +I+
Subjt:  AVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICLVSIV

AT5G01880.1 RING/U-box superfamily protein3.2e-1145.76Show/hide
Query:  YGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICLVSIV
        YGS E      +CAICL +F +GE  ++ P CNH FH SCI  WL  + +CP C  S++
Subjt:  YGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICLVSIV

AT5G17600.1 RING/U-box superfamily protein2.4e-1132.41Show/hide
Query:  HHQTSTDHGRDM----ERFESNAWREALE----RTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPIC
        HHQTS+    ++    E F S+  R +         M++ +T    Y S +      DC++CL +FE  E  ++ P CNH FH  CI  WLK +  CP+C
Subjt:  HHQTSTDHGRDM----ERFESNAWREALE----RTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPIC

Query:  LVSIVNDN
           +   N
Subjt:  LVSIVNDN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCCTCAAGCTCTTAGTGTTCCACAATCCAACCCTCCTCCTTCAATCCTCCCTTTCCTCACCGCATTTTCGGTCGTATTCGTCGTCTTCATCTCCATCATCATCTT
CTCCGTGGTCGCATCCTTTGCAATCATCATCTTCATCTATGTCATTTGCCAATACCTAATTGGGCCGACGAATTTAGACGGACACGGTCCCGACCTCGAAGCAGGTGAGA
GAGTCGAAAACCAAAGAATGATCCCAAGGGGTAGGATTTTGGTATCTCATCATCAAACAAGTACTGATCATGGGAGAGACATGGAGAGGTTTGAAAGCAATGCATGGAGG
GAGGCTTTGGAGAGAACAGTAATGGTAGAGAAAGTGACGGCGCCGGTGAGCTATGGGAGCTCCGAGGCGGTGGCGAAATGCATTGATTGTGCAATTTGTTTGGAAGATTT
TGAAAATGGAGAGCTTTGCCAGATTTTTCCAGTGTGTAATCACATTTTTCATTATTCTTGTATTCAACATTGGTTGAAGAAGAACATGACTTGTCCCATTTGTCTTGTTT
CTATTGTCAATGACAACTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCCCTCAAGCTCTTAGTGTTCCACAATCCAACCCTCCTCCTTCAATCCTCCCTTTCCTCACCGCATTTTCGGTCGTATTCGTCGTCTTCATCTCCATCATCATCTT
CTCCGTGGTCGCATCCTTTGCAATCATCATCTTCATCTATGTCATTTGCCAATACCTAATTGGGCCGACGAATTTAGACGGACACGGTCCCGACCTCGAAGCAGGTGAGA
GAGTCGAAAACCAAAGAATGATCCCAAGGGGTAGGATTTTGGTATCTCATCATCAAACAAGTACTGATCATGGGAGAGACATGGAGAGGTTTGAAAGCAATGCATGGAGG
GAGGCTTTGGAGAGAACAGTAATGGTAGAGAAAGTGACGGCGCCGGTGAGCTATGGGAGCTCCGAGGCGGTGGCGAAATGCATTGATTGTGCAATTTGTTTGGAAGATTT
TGAAAATGGAGAGCTTTGCCAGATTTTTCCAGTGTGTAATCACATTTTTCATTATTCTTGTATTCAACATTGGTTGAAGAAGAACATGACTTGTCCCATTTGTCTTGTTT
CTATTGTCAATGACAACTGCTGA
Protein sequenceShow/hide protein sequence
MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRDMERFESNAWR
EALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICLVSIVNDNC