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HG10011779 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011779
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionGATA zinc finger domain-containing protein 10-like isoform X2
Genome locationChr01:11552854..11553081
RNA-Seq ExpressionHG10011779
SyntenyHG10011779
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.9e-0750Show/hide
Query:  MMMPTFGSG---------YYDSEAGPSSA----GPSSSYMQGYGHERVKHNEYLYYEALAEV------PEPPKDQEEPEQPRVKSR
        +MMPTFG G         YYDS  GPSS+    GPS+SYM G+ H+  +HNEYLY+EA  EV       + P++QEE EQ RV+SR
Subjt:  MMMPTFGSG---------YYDSEAGPSSA----GPSSSYMQGYGHERVKHNEYLYYEALAEV------PEPPKDQEEPEQPRVKSR

KAA0049532.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]7.1e-0951.06Show/hide
Query:  MMMPTFGSGYYDSEA---------GPSSA----GPSSSYMQGYGHERVKHNEYLYYEALAEV------PEPPKDQEEPEQPRVKSRRRQQTQNR
        MMMPTFG+GY DSE          GP S+    GPS+SYM G+G    +HNEYLY+EA A+V       + P++QE+ EQ RV+SRRRQ T+NR
Subjt:  MMMPTFGSGYYDSEA---------GPSSA----GPSSSYMQGYGHERVKHNEYLYYEALAEV------PEPPKDQEEPEQPRVKSRRRQQTQNR

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.9e-0748.39Show/hide
Query:  MMPTF---------GSGYYDSEAGPSSA----GPSSSYMQGYGHERVKHNEYLYYEALAEV------PEPPKDQEEPEQPRVKSRRRQQTQNR
        MMPTF         G GYYD+  GPSS+     PS+SYM G+     +HNEYLY+EA A+V       + P++QE+ EQ RV+SRRRQ T+NR
Subjt:  MMPTF---------GSGYYDSEAGPSSA----GPSSSYMQGYGHERVKHNEYLYYEALAEV------PEPPKDQEEPEQPRVKSRRRQQTQNR

TYK01176.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]6.6e-0748.39Show/hide
Query:  MMPTF---------GSGYYDSEAGPSSA----GPSSSYMQGYGHERVKHNEYLYYEALAEV------PEPPKDQEEPEQPRVKSRRRQQTQNR
        MMPTF         G GYYD+  GPSS+     PS+SYM G+     +HNEYLY+EA A+V       + P++QE+ EQ RV+SRRRQ T+NR
Subjt:  MMPTF---------GSGYYDSEAGPSSA----GPSSSYMQGYGHERVKHNEYLYYEALAEV------PEPPKDQEEPEQPRVKSRRRQQTQNR

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.3e-0749.46Show/hide
Query:  MMPTFGSGYYDSE---------AGPSSA----GPSSSYMQGYGHERVKHNEYLYYEALAEV------PEPPKDQEEPEQPRVKSRRRQQTQNR
        MMPTFG+GY DSE          GP S+    GPS+SYM G+G    +HNEYLY+EA  +V       + PK+QE+ EQ RV+SRRRQ  +NR
Subjt:  MMPTFGSGYYDSE---------AGPSSA----GPSSSYMQGYGHERVKHNEYLYYEALAEV------PEPPKDQEEPEQPRVKSRRRQQTQNR

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.9e-0750Show/hide
Query:  MMMPTFGSG---------YYDSEAGPSSA----GPSSSYMQGYGHERVKHNEYLYYEALAEV------PEPPKDQEEPEQPRVKSR
        +MMPTFG G         YYDS  GPSS+    GPS+SYM G+ H+  +HNEYLY+EA  EV       + P++QEE EQ RV+SR
Subjt:  MMMPTFGSG---------YYDSEAGPSSA----GPSSSYMQGYGHERVKHNEYLYYEALAEV------PEPPKDQEEPEQPRVKSR

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.9e-0748.39Show/hide
Query:  MMPTF---------GSGYYDSEAGPSSA----GPSSSYMQGYGHERVKHNEYLYYEALAEV------PEPPKDQEEPEQPRVKSRRRQQTQNR
        MMPTF         G GYYD+  GPSS+     PS+SYM G+     +HNEYLY+EA A+V       + P++QE+ EQ RV+SRRRQ T+NR
Subjt:  MMPTF---------GSGYYDSEAGPSSA----GPSSSYMQGYGHERVKHNEYLYYEALAEV------PEPPKDQEEPEQPRVKSRRRQQTQNR

A0A5D3BSG8 GATA zinc finger domain-containing protein 10-like isoform X23.2e-0748.39Show/hide
Query:  MMPTF---------GSGYYDSEAGPSSA----GPSSSYMQGYGHERVKHNEYLYYEALAEV------PEPPKDQEEPEQPRVKSRRRQQTQNR
        MMPTF         G GYYD+  GPSS+     PS+SYM G+     +HNEYLY+EA A+V       + P++QE+ EQ RV+SRRRQ T+NR
Subjt:  MMPTF---------GSGYYDSEAGPSSA----GPSSSYMQGYGHERVKHNEYLYYEALAEV------PEPPKDQEEPEQPRVKSRRRQQTQNR

A0A5D3CXX3 GATA zinc finger domain-containing protein 10-like isoform X23.4e-0951.06Show/hide
Query:  MMMPTFGSGYYDSEA---------GPSSA----GPSSSYMQGYGHERVKHNEYLYYEALAEV------PEPPKDQEEPEQPRVKSRRRQQTQNR
        MMMPTFG+GY DSE          GP S+    GPS+SYM G+G    +HNEYLY+EA A+V       + P++QE+ EQ RV+SRRRQ T+NR
Subjt:  MMMPTFGSGYYDSEA---------GPSSA----GPSSSYMQGYGHERVKHNEYLYYEALAEV------PEPPKDQEEPEQPRVKSRRRQQTQNR

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein6.5e-0849.46Show/hide
Query:  MMPTFGSGYYDSE---------AGPSSA----GPSSSYMQGYGHERVKHNEYLYYEALAEV------PEPPKDQEEPEQPRVKSRRRQQTQNR
        MMPTFG+GY DSE          GP S+    GPS+SYM G+G    +HNEYLY+EA  +V       + PK+QE+ EQ RV+SRRRQ  +NR
Subjt:  MMPTFGSGYYDSE---------AGPSSA----GPSSSYMQGYGHERVKHNEYLYYEALAEV------PEPPKDQEEPEQPRVKSRRRQQTQNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATGCCAACATTTGGTTCAGGATATTATGATTCAGAGGCCGGTCCATCATCAGCTGGTCCATCGTCTTCATACATGCAAGGATATGGGCACGAACGTGTAAAGCA
TAACGAATATTTATACTATGAAGCACTTGCAGAGGTACCAGAGCCACCAAAGGATCAAGAGGAACCAGAGCAACCTAGAGTTAAAAGTCGACGACGACAACAAACTCAAA
ATCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGATGATGCCAACATTTGGTTCAGGATATTATGATTCAGAGGCCGGTCCATCATCAGCTGGTCCATCGTCTTCATACATGCAAGGATATGGGCACGAACGTGTAAAGCA
TAACGAATATTTATACTATGAAGCACTTGCAGAGGTACCAGAGCCACCAAAGGATCAAGAGGAACCAGAGCAACCTAGAGTTAAAAGTCGACGACGACAACAAACTCAAA
ATCGATGA
Protein sequenceShow/hide protein sequence
MMMPTFGSGYYDSEAGPSSAGPSSSYMQGYGHERVKHNEYLYYEALAEVPEPPKDQEEPEQPRVKSRRRQQTQNR