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HG10011788 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011788
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr01:11883437..11883874
RNA-Seq ExpressionHG10011788
SyntenyHG10011788
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045323.1 uncharacterized protein E6C27_scaffold316G00950 [Cucumis melo var. makuwa]3.2e-5880.77Show/hide
Query:  MKASTA---------DMVHRAGVDLIRNCDLPPPQKVFRSGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLMFCYRQSVKLLELR
        MKA+T+         DMV R GV+LIRNCDLPPPQKVF+SGMEEK+ELLKALRLSQTRAREAERKAAKLMEERDC+SRAFEDEARLMFCYRQS+KLLE+R
Subjt:  MKASTA---------DMVHRAGVDLIRNCDLPPPQKVFRSGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLMFCYRQSVKLLELR

Query:  VSKLQKE--AEEEEDEEEEEWDKNGGSGGMKWVWALAICLSVVGVGFLLGYTCNAS
        V KLQK+   E EE+EEEEE D+NGG+GGMKWVWALAICLSVVGVGFLLGYTCN S
Subjt:  VSKLQKE--AEEEEDEEEEEWDKNGGSGGMKWVWALAICLSVVGVGFLLGYTCNAS

XP_008455680.1 PREDICTED: uncharacterized protein LOC103495794 [Cucumis melo]1.9e-5881.41Show/hide
Query:  MKASTA---------DMVHRAGVDLIRNCDLPPPQKVFRSGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLMFCYRQSVKLLELR
        MKA+T+         DMV R GV+LIRNCDLPPPQKVF+SGMEEK+ELLKALRLSQTRAREAERKAAKLMEERDC+SRAFEDEARLMFCYRQS+KLLELR
Subjt:  MKASTA---------DMVHRAGVDLIRNCDLPPPQKVFRSGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLMFCYRQSVKLLELR

Query:  VSKLQKE--AEEEEDEEEEEWDKNGGSGGMKWVWALAICLSVVGVGFLLGYTCNAS
        V KLQK+   E EE+EEEEE D+NGG+GGMKWVWALAICLSVVGVGFLLGYTCN S
Subjt:  VSKLQKE--AEEEEDEEEEEWDKNGGSGGMKWVWALAICLSVVGVGFLLGYTCNAS

XP_022970087.1 uncharacterized protein LOC111469054 [Cucurbita maxima]2.2e-4669.93Show/hide
Query:  HRAGVDLIRNCDLPPPQKVFRS-------------------GMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLMFCYRQSVKLLEL
        ++ GVDLIRNCDLPPPQK+F +                   GMEEKLELLKALRLSQTRAREAERKAAKLMEERDC+SRAFEDEARL+FCYRQS+KL+EL
Subjt:  HRAGVDLIRNCDLPPPQKVFRS-------------------GMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLMFCYRQSVKLLEL

Query:  RVSKLQKEAEEEEDEEEEEWDKNGGSGGMKWVWALAICLSVVGVGFLLGYTCN
        RVSKL+K  EEEED      + NG  GG+KWVWALAICLSVVGVG LLGY C+
Subjt:  RVSKLQKEAEEEEDEEEEEWDKNGGSGGMKWVWALAICLSVVGVGFLLGYTCN

XP_031739981.1 uncharacterized protein LOC105435202 [Cucumis sativus]1.5e-6088.49Show/hide
Query:  DMVHRAGVDLIRNCDLPPPQKVFRSGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLMFCYRQSVKLLELRVSKLQKEAEEEEDEE
        DMV+R GV+LIRNCDLPPPQKVF+SGMEEK+ELLKALRLSQTRAREAERKAAKLMEERDC+SRAFEDEAR++FCYRQS+KLLELRV KLQK+ EEEE+EE
Subjt:  DMVHRAGVDLIRNCDLPPPQKVFRSGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLMFCYRQSVKLLELRVSKLQKEAEEEEDEE

Query:  EEEWDKNGGSGGMKWVWALAICLSVVGVGFLLGYTCNAS
        EEE DKNGG+GGMKWVWALAICLSVVGVGFLLGYTCN S
Subjt:  EEEWDKNGGSGGMKWVWALAICLSVVGVGFLLGYTCNAS

XP_038904267.1 uncharacterized protein LOC120090620 [Benincasa hispida]2.0e-6090.14Show/hide
Query:  STADMVHRAGVDLIRNCDLPPPQKVFRSGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLMFCYRQSVKLLELRVSKLQKEAEEEE
        STA+MVHRAGVDL+RNCDLPPPQKV RSGMEEKLELLKALRLSQTRAREAERKAAKLMEE+DC+SRAFEDEARLMFCYRQSVKLL+LRVSKLQK  EEEE
Subjt:  STADMVHRAGVDLIRNCDLPPPQKVFRSGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLMFCYRQSVKLLELRVSKLQKEAEEEE

Query:  DEEEEEWDKNGGSGGMKWVWALAICLSVVGVGFLLGYTCNAS
        +EEEEE D NGGS GMKWVWALAICLSVVGVG LL YTCNAS
Subjt:  DEEEEEWDKNGGSGGMKWVWALAICLSVVGVGFLLGYTCNAS

TrEMBL top hitse value%identityAlignment
A0A0A0KZ57 Uncharacterized protein4.7e-5568.51Show/hide
Query:  DMVHRAGVDLIRNCDLPPPQKVFRSGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLMFCYRQSVKLLELRVSKLQK---------
        DMV+R GV+LIRNCDLPPPQKVF+SGMEEK+ELLKALRLSQTRAREAERKAAKLMEERDC+SRAFEDEAR++FCYRQS+KLLELRV KLQK         
Subjt:  DMVHRAGVDLIRNCDLPPPQKVFRSGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLMFCYRQSVKLLELRVSKLQK---------

Query:  ---------------------------------EAEEEEDEEEEEWDKNGGSGGMKWVWALAICLSVVGVGFLLGYTCNAS
                                         E EEEE+EEEEE DKNGG+GGMKWVWALAICLSVVGVGFLLGYTCN S
Subjt:  ---------------------------------EAEEEEDEEEEEWDKNGGSGGMKWVWALAICLSVVGVGFLLGYTCNAS

A0A1S3C2P7 uncharacterized protein LOC1034957949.1e-5981.41Show/hide
Query:  MKASTA---------DMVHRAGVDLIRNCDLPPPQKVFRSGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLMFCYRQSVKLLELR
        MKA+T+         DMV R GV+LIRNCDLPPPQKVF+SGMEEK+ELLKALRLSQTRAREAERKAAKLMEERDC+SRAFEDEARLMFCYRQS+KLLELR
Subjt:  MKASTA---------DMVHRAGVDLIRNCDLPPPQKVFRSGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLMFCYRQSVKLLELR

Query:  VSKLQKE--AEEEEDEEEEEWDKNGGSGGMKWVWALAICLSVVGVGFLLGYTCNAS
        V KLQK+   E EE+EEEEE D+NGG+GGMKWVWALAICLSVVGVGFLLGYTCN S
Subjt:  VSKLQKE--AEEEEDEEEEEWDKNGGSGGMKWVWALAICLSVVGVGFLLGYTCNAS

A0A5A7TP56 Uncharacterized protein1.6e-5880.77Show/hide
Query:  MKASTA---------DMVHRAGVDLIRNCDLPPPQKVFRSGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLMFCYRQSVKLLELR
        MKA+T+         DMV R GV+LIRNCDLPPPQKVF+SGMEEK+ELLKALRLSQTRAREAERKAAKLMEERDC+SRAFEDEARLMFCYRQS+KLLE+R
Subjt:  MKASTA---------DMVHRAGVDLIRNCDLPPPQKVFRSGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLMFCYRQSVKLLELR

Query:  VSKLQKE--AEEEEDEEEEEWDKNGGSGGMKWVWALAICLSVVGVGFLLGYTCNAS
        V KLQK+   E EE+EEEEE D+NGG+GGMKWVWALAICLSVVGVGFLLGYTCN S
Subjt:  VSKLQKE--AEEEEDEEEEEWDKNGGSGGMKWVWALAICLSVVGVGFLLGYTCNAS

A0A5D3BEN7 Uncharacterized protein9.1e-5981.41Show/hide
Query:  MKASTA---------DMVHRAGVDLIRNCDLPPPQKVFRSGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLMFCYRQSVKLLELR
        MKA+T+         DMV R GV+LIRNCDLPPPQKVF+SGMEEK+ELLKALRLSQTRAREAERKAAKLMEERDC+SRAFEDEARLMFCYRQS+KLLELR
Subjt:  MKASTA---------DMVHRAGVDLIRNCDLPPPQKVFRSGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLMFCYRQSVKLLELR

Query:  VSKLQKE--AEEEEDEEEEEWDKNGGSGGMKWVWALAICLSVVGVGFLLGYTCNAS
        V KLQK+   E EE+EEEEE D+NGG+GGMKWVWALAICLSVVGVGFLLGYTCN S
Subjt:  VSKLQKE--AEEEEDEEEEEWDKNGGSGGMKWVWALAICLSVVGVGFLLGYTCNAS

A0A6J1HY55 uncharacterized protein LOC1114690541.0e-4669.93Show/hide
Query:  HRAGVDLIRNCDLPPPQKVFRS-------------------GMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLMFCYRQSVKLLEL
        ++ GVDLIRNCDLPPPQK+F +                   GMEEKLELLKALRLSQTRAREAERKAAKLMEERDC+SRAFEDEARL+FCYRQS+KL+EL
Subjt:  HRAGVDLIRNCDLPPPQKVFRS-------------------GMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLMFCYRQSVKLLEL

Query:  RVSKLQKEAEEEEDEEEEEWDKNGGSGGMKWVWALAICLSVVGVGFLLGYTCN
        RVSKL+K  EEEED      + NG  GG+KWVWALAICLSVVGVG LLGY C+
Subjt:  RVSKLQKEAEEEEDEEEEEWDKNGGSGGMKWVWALAICLSVVGVGFLLGYTCN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G01240.1 unknown protein1.0e-0938.28Show/hide
Query:  PQKVFRSGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLMFCYRQSVKLLELRVSKLQKEAEEEEDEEEE-----------EWDKN
        P    RS    K +LL+ALR SQTRAREAER A +   E+D +      +A  M  Y+Q +KLLE+    LQ + EEE++E+ +           E  K 
Subjt:  PQKVFRSGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLMFCYRQSVKLLELRVSKLQKEAEEEEDEEEE-----------EWDKN

Query:  GGSGGMKWVWALAICLSVVGVGFLLGYT
        G +G  +++ A A+  S++G G LLG+T
Subjt:  GGSGGMKWVWALAICLSVVGVGFLLGYT

AT1G01240.2 unknown protein1.0e-0938.28Show/hide
Query:  PQKVFRSGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLMFCYRQSVKLLELRVSKLQKEAEEEEDEEEE-----------EWDKN
        P    RS    K +LL+ALR SQTRAREAER A +   E+D +      +A  M  Y+Q +KLLE+    LQ + EEE++E+ +           E  K 
Subjt:  PQKVFRSGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLMFCYRQSVKLLELRVSKLQKEAEEEEDEEEE-----------EWDKN

Query:  GGSGGMKWVWALAICLSVVGVGFLLGYT
        G +G  +++ A A+  S++G G LLG+T
Subjt:  GGSGGMKWVWALAICLSVVGVGFLLGYT

AT1G01240.3 unknown protein1.0e-0938.28Show/hide
Query:  PQKVFRSGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLMFCYRQSVKLLELRVSKLQKEAEEEEDEEEE-----------EWDKN
        P    RS    K +LL+ALR SQTRAREAER A +   E+D +      +A  M  Y+Q +KLLE+    LQ + EEE++E+ +           E  K 
Subjt:  PQKVFRSGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLMFCYRQSVKLLELRVSKLQKEAEEEEDEEEE-----------EWDKN

Query:  GGSGGMKWVWALAICLSVVGVGFLLGYT
        G +G  +++ A A+  S++G G LLG+T
Subjt:  GGSGGMKWVWALAICLSVVGVGFLLGYT

AT2G46550.1 unknown protein3.5e-1029.35Show/hide
Query:  KASTADMVHRAGVDLIRNCDLPPPQKVFRS-----------GMEE------------------------------KLELLKALRLSQTRAREAERKAAKL
        K   A +V +  +D + NCDLP PQK+ RS           G+ +                              K ELL+ALR SQTRAREAE  A + 
Subjt:  KASTADMVHRAGVDLIRNCDLPPPQKVFRS-----------GMEE------------------------------KLELLKALRLSQTRAREAERKAAKL

Query:  MEERDCLSRAFEDEARLMFCYRQSVKLLELRVSKLQKEAEEEEDEEEEE-------W-------------DKNGGSGGMKWVWALAICLSVVGVGFLLGY
          E++ L +    +A  +F Y+Q ++LL+L    LQ + +E +++  ++       W              K G   G K+   LA+ +S+VG G LLG+
Subjt:  MEERDCLSRAFEDEARLMFCYRQSVKLLELRVSKLQKEAEEEEDEEEEE-------W-------------DKNGGSGGMKWVWALAICLSVVGVGFLLGY

Query:  T
        T
Subjt:  T

AT2G46550.2 unknown protein3.5e-1029.35Show/hide
Query:  KASTADMVHRAGVDLIRNCDLPPPQKVFRS-----------GMEE------------------------------KLELLKALRLSQTRAREAERKAAKL
        K   A +V +  +D + NCDLP PQK+ RS           G+ +                              K ELL+ALR SQTRAREAE  A + 
Subjt:  KASTADMVHRAGVDLIRNCDLPPPQKVFRS-----------GMEE------------------------------KLELLKALRLSQTRAREAERKAAKL

Query:  MEERDCLSRAFEDEARLMFCYRQSVKLLELRVSKLQKEAEEEEDEEEEE-------W-------------DKNGGSGGMKWVWALAICLSVVGVGFLLGY
          E++ L +    +A  +F Y+Q ++LL+L    LQ + +E +++  ++       W              K G   G K+   LA+ +S+VG G LLG+
Subjt:  MEERDCLSRAFEDEARLMFCYRQSVKLLELRVSKLQKEAEEEEDEEEEE-------W-------------DKNGGSGGMKWVWALAICLSVVGVGFLLGY

Query:  T
        T
Subjt:  T


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGCTTCGACGGCGGACATGGTCCACAGAGCCGGGGTTGATCTGATTCGAAATTGCGATCTGCCGCCGCCGCAGAAGGTATTCAGAAGTGGGATGGAGGAGAAATT
GGAGCTATTGAAGGCTCTGAGACTGTCGCAAACGAGGGCGAGAGAAGCGGAGAGAAAGGCGGCGAAATTGATGGAGGAAAGGGATTGTCTTAGTAGGGCTTTTGAAGATG
AAGCCAGATTGATGTTCTGTTATCGACAGTCGGTTAAATTGCTGGAGCTTAGGGTTTCGAAGTTGCAGAAAGAAGCGGAAGAAGAAGAAGACGAAGAAGAAGAAGAATGG
GATAAGAATGGTGGTAGTGGAGGAATGAAATGGGTTTGGGCTTTGGCAATTTGTTTGAGTGTTGTTGGAGTTGGCTTTCTTTTGGGCTATACATGTAATGCTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGCTTCGACGGCGGACATGGTCCACAGAGCCGGGGTTGATCTGATTCGAAATTGCGATCTGCCGCCGCCGCAGAAGGTATTCAGAAGTGGGATGGAGGAGAAATT
GGAGCTATTGAAGGCTCTGAGACTGTCGCAAACGAGGGCGAGAGAAGCGGAGAGAAAGGCGGCGAAATTGATGGAGGAAAGGGATTGTCTTAGTAGGGCTTTTGAAGATG
AAGCCAGATTGATGTTCTGTTATCGACAGTCGGTTAAATTGCTGGAGCTTAGGGTTTCGAAGTTGCAGAAAGAAGCGGAAGAAGAAGAAGACGAAGAAGAAGAAGAATGG
GATAAGAATGGTGGTAGTGGAGGAATGAAATGGGTTTGGGCTTTGGCAATTTGTTTGAGTGTTGTTGGAGTTGGCTTTCTTTTGGGCTATACATGTAATGCTTCATGA
Protein sequenceShow/hide protein sequence
MKASTADMVHRAGVDLIRNCDLPPPQKVFRSGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLMFCYRQSVKLLELRVSKLQKEAEEEEDEEEEEW
DKNGGSGGMKWVWALAICLSVVGVGFLLGYTCNAS