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HG10011795 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011795
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProtein Ycf2-like
Genome locationChr01:12229609..12232067
RNA-Seq ExpressionHG10011795
SyntenyHG10011795
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047596.1 protein Ycf2-like [Cucumis melo var. makuwa]9.7e-4060.12Show/hide
Query:  EEHDSNEGEEDESKLDKKKHKEKGKKVKSTIEKAKGKQITREKGIAPLRGDRKEDGLYLMSAERRNELLKINLQTKCTVVEKLKENLDEELQEKFRNTIF
        E+ +S+  E       + K +EKGKKVK+  ++ K ++  R KG AP+  ++ ED +YLM +ERRNE LKINL  K TV+EK+KENL + L  +FR  IF
Subjt:  EEHDSNEGEEDESKLDKKKHKEKGKKVKSTIEKAKGKQITREKGIAPLRGDRKEDGLYLMSAERRNELLKINLQTKCTVVEKLKENLDEELQEKFRNTIF

Query:  GHFLDFSITNQSSQLLLHLIQRMCKPKSSSQLIFLIGGGVLKFGLREFALITGLNCGELPIID
        GHFL+ SITNQSSQLLLHLIQRMCKPKS+SQL FLIGG VL+FGLREFALITGL C E+P I+
Subjt:  GHFLDFSITNQSSQLLLHLIQRMCKPKSSSQLIFLIGGGVLKFGLREFALITGLNCGELPIID

XP_022132727.1 uncharacterized protein LOC111005524 [Momordica charantia]2.6e-1636.84Show/hide
Query:  TQQEEHDSNEGEEDESKLDKKKHKEKGKKVKSTIEKAKGKQITREKGIAPLRGDRKEDGLYLMSAERRNELLKINLQTKCTVVEKLKENLDEELQEKFRN
        T+Q+   S E E++++K  K+  + K  +V S+  +   +Q            D  ++   L+   R +   +INL +K  V+  +K  L+E   +  R 
Subjt:  TQQEEHDSNEGEEDESKLDKKKHKEKGKKVKSTIEKAKGKQITREKGIAPLRGDRKEDGLYLMSAERRNELLKINLQTKCTVVEKLKENLDEELQEKFRN

Query:  TIFGHFLDFSITNQSSQLLLHLIQRMCKPKSSSQLIFLIGGGVLKFGLREFALITGLNCGELPIIDQSMVK
        + FG+FLDF IT  SSQL  HLI+R C  K+ ++L F + G V KFG+++FALITG+NCGELP ID S ++
Subjt:  TIFGHFLDFSITNQSSQLLLHLIQRMCKPKSSSQLIFLIGGGVLKFGLREFALITGLNCGELPIIDQSMVK

XP_031743190.1 uncharacterized protein LOC101221625 isoform X3 [Cucumis sativus]1.3e-1536.41Show/hide
Query:  EGEEDESKLDKKKHKEKG---KKVKSTIEKAKGKQITREKGIAPLRGDR-KEDGLYLMSAERRNEL------------------LKINLQTKCTVVEKLK
        E +E+ S++D  +   +G   ++ K   E++KG+   R+K     RG R K+ G+   S+E  +E+                   +INL +K  V+  +K
Subjt:  EGEEDESKLDKKKHKEKG---KKVKSTIEKAKGKQITREKGIAPLRGDR-KEDGLYLMSAERRNEL------------------LKINLQTKCTVVEKLK

Query:  ENLDEELQEKFRNTIFGHFLDFSITNQSSQLLLHLIQRMCKPKSSSQLIFLIGGGVLKFGLREFALITGLNCGELPIIDQSMVK
          L+E   +KF+ + FG+FLD  I+  SSQL  HLI+R C  K+ ++L F + G + KFG+++FALITGLNCGELP ID S ++
Subjt:  ENLDEELQEKFRNTIFGHFLDFSITNQSSQLLLHLIQRMCKPKSSSQLIFLIGGGVLKFGLREFALITGLNCGELPIIDQSMVK

XP_031743193.1 uncharacterized protein LOC101221625 isoform X6 [Cucumis sativus]7.4e-1636.36Show/hide
Query:  EGEEDESKLDKKKHKEKGKKVKSTIEKAKGKQITREKGIAPLRGDR-KEDGLYLMSAERRNE-------------LLKINLQTKCTVVEKLKENLDEELQ
        E +E+ S++D  +   +G + +   + A+  +   E G    RG R K+ G+   S+E  +E               +INL +K  V+  +K  L+E   
Subjt:  EGEEDESKLDKKKHKEKGKKVKSTIEKAKGKQITREKGIAPLRGDR-KEDGLYLMSAERRNE-------------LLKINLQTKCTVVEKLKENLDEELQ

Query:  EKFRNTIFGHFLDFSITNQSSQLLLHLIQRMCKPKSSSQLIFLIGGGVLKFGLREFALITGLNCGELPIIDQSMVK
        +KF+ + FG+FLD  I+  SSQL  HLI+R C  K+ ++L F + G + KFG+++FALITGLNCGELP ID S ++
Subjt:  EKFRNTIFGHFLDFSITNQSSQLLLHLIQRMCKPKSSSQLIFLIGGGVLKFGLREFALITGLNCGELPIIDQSMVK

XP_031743195.1 uncharacterized protein LOC101221625 isoform X8 [Cucumis sativus]5.7e-1637.43Show/hide
Query:  EGEEDESKLDKKKHKEKG---KKVKSTIEKAKGKQITREKGIAPLRGDR-KEDGLYLMSAERRNE-------------LLKINLQTKCTVVEKLKENLDE
        E +E+ S++D  +   +G   ++ K   E++KG+   R+K     RG R K+ G+   S+E  +E               +INL +K  V+  +K  L+E
Subjt:  EGEEDESKLDKKKHKEKG---KKVKSTIEKAKGKQITREKGIAPLRGDR-KEDGLYLMSAERRNE-------------LLKINLQTKCTVVEKLKENLDE

Query:  ELQEKFRNTIFGHFLDFSITNQSSQLLLHLIQRMCKPKSSSQLIFLIGGGVLKFGLREFALITGLNCGELPIIDQSMVK
           +KF+ + FG+FLD  I+  SSQL  HLI+R C  K+ ++L F + G + KFG+++FALITGLNCGELP ID S ++
Subjt:  ELQEKFRNTIFGHFLDFSITNQSSQLLLHLIQRMCKPKSSSQLIFLIGGGVLKFGLREFALITGLNCGELPIIDQSMVK

TrEMBL top hitse value%identityAlignment
A0A0A0KI50 TF-B3 domain-containing protein8.0e-1635.36Show/hide
Query:  EGEEDESKLDKKKHKEKGKKVKSTIEKAKGKQITREKGIAPLRGDR-KEDGLYLMSAERRNEL------------------LKINLQTKCTVVEKLKENL
        E +E+ S++D  +   +G + +   + A+  +   E G    RG R K+ G+   S+E  +E+                   +INL +K  V+  +K  L
Subjt:  EGEEDESKLDKKKHKEKGKKVKSTIEKAKGKQITREKGIAPLRGDR-KEDGLYLMSAERRNEL------------------LKINLQTKCTVVEKLKENL

Query:  DEELQEKFRNTIFGHFLDFSITNQSSQLLLHLIQRMCKPKSSSQLIFLIGGGVLKFGLREFALITGLNCGELPIIDQSMVK
        +E   +KF+ + FG+FLD  I+  SSQL  HLI+R C  K+ ++L F + G + KFG+++FALITGLNCGELP ID S ++
Subjt:  DEELQEKFRNTIFGHFLDFSITNQSSQLLLHLIQRMCKPKSSSQLIFLIGGGVLKFGLREFALITGLNCGELPIIDQSMVK

A0A1S3B0L9 uncharacterized protein LOC103484737 isoform X57.5e-1434.05Show/hide
Query:  SNTQQEEHDSNEGEEDESK------LDKKKHKEKGKKVKSTIEKAKGKQITREKGI--APLRGDRKEDGL----YLMSAERRNELLKINLQTKCTVVEKL
        S  Q++  +++E + D+          KKK  E+ KK     ++ K  +   + G+  +P   D + D       L+     +   +INL +K  V+  +
Subjt:  SNTQQEEHDSNEGEEDESK------LDKKKHKEKGKKVKSTIEKAKGKQITREKGI--APLRGDRKEDGL----YLMSAERRNELLKINLQTKCTVVEKL

Query:  KENLDEELQEKFRNTIFGHFLDFSITNQSSQLLLHLIQRMCKPKSSSQLIFLIGGGVLKFGLREFALITGLNCGELPIIDQSMVK
        K  L+E   +KF+ + FG+FLD  ++  SSQL  HLI+R C  K+  +L F + G + KFG+++FALITGLNCGELP ID S ++
Subjt:  KENLDEELQEKFRNTIFGHFLDFSITNQSSQLLLHLIQRMCKPKSSSQLIFLIGGGVLKFGLREFALITGLNCGELPIIDQSMVK

A0A5A7U047 Protein Ycf2-like4.7e-4060.12Show/hide
Query:  EEHDSNEGEEDESKLDKKKHKEKGKKVKSTIEKAKGKQITREKGIAPLRGDRKEDGLYLMSAERRNELLKINLQTKCTVVEKLKENLDEELQEKFRNTIF
        E+ +S+  E       + K +EKGKKVK+  ++ K ++  R KG AP+  ++ ED +YLM +ERRNE LKINL  K TV+EK+KENL + L  +FR  IF
Subjt:  EEHDSNEGEEDESKLDKKKHKEKGKKVKSTIEKAKGKQITREKGIAPLRGDRKEDGLYLMSAERRNELLKINLQTKCTVVEKLKENLDEELQEKFRNTIF

Query:  GHFLDFSITNQSSQLLLHLIQRMCKPKSSSQLIFLIGGGVLKFGLREFALITGLNCGELPIID
        GHFL+ SITNQSSQLLLHLIQRMCKPKS+SQL FLIGG VL+FGLREFALITGL C E+P I+
Subjt:  GHFLDFSITNQSSQLLLHLIQRMCKPKSSSQLIFLIGGGVLKFGLREFALITGLNCGELPIID

A0A5D3CNI7 TF-B3 domain-containing protein7.5e-1434.05Show/hide
Query:  SNTQQEEHDSNEGEEDESK------LDKKKHKEKGKKVKSTIEKAKGKQITREKGI--APLRGDRKEDGL----YLMSAERRNELLKINLQTKCTVVEKL
        S  Q++  +++E + D+          KKK  E+ KK     ++ K  +   + G+  +P   D + D       L+     +   +INL +K  V+  +
Subjt:  SNTQQEEHDSNEGEEDESK------LDKKKHKEKGKKVKSTIEKAKGKQITREKGI--APLRGDRKEDGL----YLMSAERRNELLKINLQTKCTVVEKL

Query:  KENLDEELQEKFRNTIFGHFLDFSITNQSSQLLLHLIQRMCKPKSSSQLIFLIGGGVLKFGLREFALITGLNCGELPIIDQSMVK
        K  L+E   +KF+ + FG+FLD  ++  SSQL  HLI+R C  K+  +L F + G + KFG+++FALITGLNCGELP ID S ++
Subjt:  KENLDEELQEKFRNTIFGHFLDFSITNQSSQLLLHLIQRMCKPKSSSQLIFLIGGGVLKFGLREFALITGLNCGELPIIDQSMVK

A0A6J1BX50 uncharacterized protein LOC1110055241.2e-1636.84Show/hide
Query:  TQQEEHDSNEGEEDESKLDKKKHKEKGKKVKSTIEKAKGKQITREKGIAPLRGDRKEDGLYLMSAERRNELLKINLQTKCTVVEKLKENLDEELQEKFRN
        T+Q+   S E E++++K  K+  + K  +V S+  +   +Q            D  ++   L+   R +   +INL +K  V+  +K  L+E   +  R 
Subjt:  TQQEEHDSNEGEEDESKLDKKKHKEKGKKVKSTIEKAKGKQITREKGIAPLRGDRKEDGLYLMSAERRNELLKINLQTKCTVVEKLKENLDEELQEKFRN

Query:  TIFGHFLDFSITNQSSQLLLHLIQRMCKPKSSSQLIFLIGGGVLKFGLREFALITGLNCGELPIIDQSMVK
        + FG+FLDF IT  SSQL  HLI+R C  K+ ++L F + G V KFG+++FALITG+NCGELP ID S ++
Subjt:  TIFGHFLDFSITNQSSQLLLHLIQRMCKPKSSSQLIFLIGGGVLKFGLREFALITGLNCGELPIIDQSMVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G31150.1 Domain of unknown function (DUF1985)2.3e-0733.78Show/hide
Query:  EKFRNTIFGHFLDFSIT--NQSSQLLLHLIQRMCKPKSSSQLIFLIGGGVLKFGLREFALITGLNCGELPIIDQ
        E+ +++ FG   +F +   + S +L+  L+ R    K   +L F+ GG  ++F +REF ++TGL CG+LP  D+
Subjt:  EKFRNTIFGHFLDFSIT--NQSSQLLLHLIQRMCKPKSSSQLIFLIGGGVLKFGLREFALITGLNCGELPIIDQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGAGTCACAAATGGTAAAAGCCCAACAGTACGCATACTCAAGCAGGGGCTATTTGGCATTCACAAATGGTAAAAGCCCAACATCCCTCGCAGGCATCTCAATAGC
AGTCCCTCGCATCCTCAATCGCAGTCTGTCGCGCTTCAACCGGTCGTTCGCGCCTCAGCTGGCCGTTCACTCATTCCTCTCGCCTACCGTTCATCCTGACGATGCCCTCT
CGCTGATTGTTCACCCCGACGCGCCCCTCCACGCGTCCCTCTCGCTTAGCCTTGCCTATGGATCATATTATCCATCAAATACTCAACAGGAAGAACATGATAGTAATGAA
GGTGAAGAGGATGAATCAAAACTTGACAAAAAGAAACACAAGGAGAAAGGGAAAAAGGTTAAAAGTACCATAGAGAAAGCAAAGGGAAAACAAATCACAAGGGAGAAAGG
AATCGCACCATTACGAGGTGATAGAAAGGAGGACGGGTTGTATCTGATGAGTGCTGAAAGGAGAAACGAACTACTCAAAATAAACTTGCAAACAAAGTGTACAGTAGTTG
AAAAGCTTAAGGAAAACTTAGATGAAGAATTGCAAGAGAAGTTTAGAAACACAATCTTTGGACATTTCCTTGATTTTTCAATTACAAATCAGTCATCACAGCTTTTATTA
CATTTAATCCAAAGAATGTGTAAACCTAAGTCTTCTAGTCAGTTGATTTTCTTGATAGGCGGTGGGGTATTGAAGTTTGGTTTAAGGGAATTTGCTTTGATAACTGGTTT
AAATTGTGGAGAACTACCGATCATTGATCAAAGTATGGTAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGAGTCACAAATGGTAAAAGCCCAACAGTACGCATACTCAAGCAGGGGCTATTTGGCATTCACAAATGGTAAAAGCCCAACATCCCTCGCAGGCATCTCAATAGC
AGTCCCTCGCATCCTCAATCGCAGTCTGTCGCGCTTCAACCGGTCGTTCGCGCCTCAGCTGGCCGTTCACTCATTCCTCTCGCCTACCGTTCATCCTGACGATGCCCTCT
CGCTGATTGTTCACCCCGACGCGCCCCTCCACGCGTCCCTCTCGCTTAGCCTTGCCTATGGATCATATTATCCATCAAATACTCAACAGGAAGAACATGATAGTAATGAA
GGTGAAGAGGATGAATCAAAACTTGACAAAAAGAAACACAAGGAGAAAGGGAAAAAGGTTAAAAGTACCATAGAGAAAGCAAAGGGAAAACAAATCACAAGGGAGAAAGG
AATCGCACCATTACGAGGTGATAGAAAGGAGGACGGGTTGTATCTGATGAGTGCTGAAAGGAGAAACGAACTACTCAAAATAAACTTGCAAACAAAGTGTACAGTAGTTG
AAAAGCTTAAGGAAAACTTAGATGAAGAATTGCAAGAGAAGTTTAGAAACACAATCTTTGGACATTTCCTTGATTTTTCAATTACAAATCAGTCATCACAGCTTTTATTA
CATTTAATCCAAAGAATGTGTAAACCTAAGTCTTCTAGTCAGTTGATTTTCTTGATAGGCGGTGGGGTATTGAAGTTTGGTTTAAGGGAATTTGCTTTGATAACTGGTTT
AAATTGTGGAGAACTACCGATCATTGATCAAAGTATGGTAAAATGA
Protein sequenceShow/hide protein sequence
MCESQMVKAQQYAYSSRGYLAFTNGKSPTSLAGISIAVPRILNRSLSRFNRSFAPQLAVHSFLSPTVHPDDALSLIVHPDAPLHASLSLSLAYGSYYPSNTQQEEHDSNE
GEEDESKLDKKKHKEKGKKVKSTIEKAKGKQITREKGIAPLRGDRKEDGLYLMSAERRNELLKINLQTKCTVVEKLKENLDEELQEKFRNTIFGHFLDFSITNQSSQLLL
HLIQRMCKPKSSSQLIFLIGGGVLKFGLREFALITGLNCGELPIIDQSMVK