; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10011796 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011796
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionClassical arabinogalactan protein 9
Genome locationChr01:12254943..12255467
RNA-Seq ExpressionHG10011796
SyntenyHG10011796
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053440.1 classical arabinogalactan protein 9 [Cucumis melo var. makuwa]7.6e-4681.03Show/hide
Query:  MKMGFQFVMVLALFATSCMAQAPSGAPAQPPTTPAVPPPSTPPPTASPPPATPPPATPPPATPPPATPPTATPPPATPPPASTPPSSPPTSAPTSPPPAS
        MKMGFQFVM LALFATSCMAQAP  APAQPP+TPAVPPPSTPPP ASPPPATPPPATPPPATPPPATPP A+ PP      S+PPS PP S PTSPPP+S
Subjt:  MKMGFQFVMVLALFATSCMAQAPSGAPAQPPTTPAVPPPSTPPPTASPPPATPPPATPPPATPPPATPPTATPPPATPPPASTPPSSPPTSAPTSPPPAS

Query:  PNSSPTPPPKEGPTSSPTSSPPSPPPEGIVPTGSPGPSPRPPPPPPGGNGAASISRGMMVGGAVGGALLAMVFA
        P+S PT PPKEGP S PTSSPPSPPPEG VPT SPGPS  PPPPPP GNGAAS+SRGMMVGGAV GA LAM+FA
Subjt:  PNSSPTPPPKEGPTSSPTSSPPSPPPEGIVPTGSPGPSPRPPPPPPGGNGAASISRGMMVGGAVGGALLAMVFA

KAG6600667.1 hypothetical protein SDJN03_05900, partial [Cucurbita argyrosperma subsp. sororia]4.6e-3573.37Show/hide
Query:  MKMGFQFVMVLALFATSCMAQAPSGAPAQPPTTPAVPPPSTPPPTASPPPATPPPA-TPPPATPPPATPPTATPPPATPPPASTPPSSPPTSAPTSPPPA
        MKMG QF+MVLA  ATS MAQAP  APAQPPTTPAVPPPSTPPP ASPPPATPPPA TPPPATPPPATPP ATPPPATPP A TPPS PP + PTSP   
Subjt:  MKMGFQFVMVLALFATSCMAQAPSGAPAQPPTTPAVPPPSTPPPTASPPPATPPPA-TPPPATPPPATPPTATPPPATPPPASTPPSSPPTSAPTSPPPA

Query:  SPNSSPTPPPKEGPTSSP---------TSSPPSPPPEGIVPTGSPGPSPRPPPPPPGGNGAASISRGMMVGGAVGGALLAMVFA
        +P SSPTPPPKEGP SSP         T+SPPSPP EG VP+G+PGP+    PPPP  NGA SISR  MVG AV G LLAMVFA
Subjt:  SPNSSPTPPPKEGPTSSP---------TSSPPSPPPEGIVPTGSPGPSPRPPPPPPGGNGAASISRGMMVGGAVGGALLAMVFA

TYK14854.1 vegetative cell wall protein gp1 [Cucumis melo var. makuwa]7.6e-4681.03Show/hide
Query:  MKMGFQFVMVLALFATSCMAQAPSGAPAQPPTTPAVPPPSTPPPTASPPPATPPPATPPPATPPPATPPTATPPPATPPPASTPPSSPPTSAPTSPPPAS
        MKMGFQFVM LALFATSCMAQAP  APAQPP+TPAVPPPSTPPP ASPPPATPPPATPPPATPPPATPP A+ PP      S+PPS PP S PTSPPP+S
Subjt:  MKMGFQFVMVLALFATSCMAQAPSGAPAQPPTTPAVPPPSTPPPTASPPPATPPPATPPPATPPPATPPTATPPPATPPPASTPPSSPPTSAPTSPPPAS

Query:  PNSSPTPPPKEGPTSSPTSSPPSPPPEGIVPTGSPGPSPRPPPPPPGGNGAASISRGMMVGGAVGGALLAMVFA
        P+S PT PPKEGP S PTSSPPSPPPEG VPT SPGPS  PPPPPP GNGAAS+SRGMMVGGAV GA LAM+FA
Subjt:  PNSSPTPPPKEGPTSSPTSSPPSPPPEGIVPTGSPGPSPRPPPPPPGGNGAASISRGMMVGGAVGGALLAMVFA

XP_008455676.1 PREDICTED: vegetative cell wall protein gp1 [Cucumis melo]1.1e-4480.81Show/hide
Query:  MGFQFVMVLALFATSCMAQAPSGAPAQPPTTPAVPPPSTPPPTASPPPATPPPATPPPATPPPATPPTATPPPATPPPASTPPSSPPTSAPTSPPPASPN
        MGFQFVM LALFATSCMAQAP  APAQPP+TPAVPPPSTPPP ASPPPATPPPATPPPATPPPATPP A+ PP      S+PPS PP S PTSPPP+SP+
Subjt:  MGFQFVMVLALFATSCMAQAPSGAPAQPPTTPAVPPPSTPPPTASPPPATPPPATPPPATPPPATPPTATPPPATPPPASTPPSSPPTSAPTSPPPASPN

Query:  SSPTPPPKEGPTSSPTSSPPSPPPEGIVPTGSPGPSPRPPPPPPGGNGAASISRGMMVGGAVGGALLAMVFA
        S PT PPKEGP S PTSSPPSPPPEG VPT SPGPS  PPPPPP GNGAAS+SRGMMVGGAV GA LAM+FA
Subjt:  SSPTPPPKEGPTSSPTSSPPSPPPEGIVPTGSPGPSPRPPPPPPGGNGAASISRGMMVGGAVGGALLAMVFA

XP_022984561.1 classical arabinogalactan protein 4-like [Cucurbita maxima]1.2e-3572.88Show/hide
Query:  MKMGFQFVMVLALFATSCMAQAPSGAPAQPPTTPAVPPPSTPPPTASPPPATPPPATPPPATPPPATPPTATPPPATPPPASTPPSSPPTSAPTSPPPAS
        MKMGFQFVMVLALFATS MAQAP  APAQPPTTPAVPPPSTPPP  +       PATPPPA    ATPP ATPPPA  PP S PPSSPPT      PPAS
Subjt:  MKMGFQFVMVLALFATSCMAQAPSGAPAQPPTTPAVPPPSTPPPTASPPPATPPPATPPPATPPPATPPTATPPPATPPPASTPPSSPPTSAPTSPPPAS

Query:  PNSSPTPPPKEGPTSSPT---SSPPSPPPEGIVPTGSPGPSPRPPPPPPGGNGAASISRGMMVGGAVGGALLAMVFA
        P +SPTPPPKEGP SSPT   +SPPSPP EG+VP+ SPGP+   PPPPPG NGAA++SRG+MVGGAV GALLAMVFA
Subjt:  PNSSPTPPPKEGPTSSPT---SSPPSPPPEGIVPTGSPGPSPRPPPPPPGGNGAASISRGMMVGGAVGGALLAMVFA

TrEMBL top hitse value%identityAlignment
A0A0A0L0L1 Uncharacterized protein2.8e-4681.61Show/hide
Query:  MKMGFQFVMVLALFATSCMAQAPSGAPAQPPTTPAVPPPSTPPPTASPPPATPPPATPPPATPPPATPPTATPPPATPPPASTPPSSPPTSAPTSPPPAS
        MKMGFQFVM LALFATSCMAQAP  APAQPP+TPAVPPPSTPPP ASPPPATPPPATPPPATPPPATPP A+ PP      S+PPS PP S PTSPPP+S
Subjt:  MKMGFQFVMVLALFATSCMAQAPSGAPAQPPTTPAVPPPSTPPPTASPPPATPPPATPPPATPPPATPPTATPPPATPPPASTPPSSPPTSAPTSPPPAS

Query:  PNSSPTPPPKEGPTSSPTSSPPSPPPEGIVPTGSPGPSPRPPPPPPGGNGAASISRGMMVGGAVGGALLAMVFA
        P+S PT PPKEGP S PTSSPPSPPPEG VPT SPGPS  PPPPPP GNGAAS+SRGMMVGGAV GA LAMVFA
Subjt:  PNSSPTPPPKEGPTSSPTSSPPSPPPEGIVPTGSPGPSPRPPPPPPGGNGAASISRGMMVGGAVGGALLAMVFA

A0A1S3C1K1 vegetative cell wall protein gp15.3e-4580.81Show/hide
Query:  MGFQFVMVLALFATSCMAQAPSGAPAQPPTTPAVPPPSTPPPTASPPPATPPPATPPPATPPPATPPTATPPPATPPPASTPPSSPPTSAPTSPPPASPN
        MGFQFVM LALFATSCMAQAP  APAQPP+TPAVPPPSTPPP ASPPPATPPPATPPPATPPPATPP A+ PP      S+PPS PP S PTSPPP+SP+
Subjt:  MGFQFVMVLALFATSCMAQAPSGAPAQPPTTPAVPPPSTPPPTASPPPATPPPATPPPATPPPATPPTATPPPATPPPASTPPSSPPTSAPTSPPPASPN

Query:  SSPTPPPKEGPTSSPTSSPPSPPPEGIVPTGSPGPSPRPPPPPPGGNGAASISRGMMVGGAVGGALLAMVFA
        S PT PPKEGP S PTSSPPSPPPEG VPT SPGPS  PPPPPP GNGAAS+SRGMMVGGAV GA LAM+FA
Subjt:  SSPTPPPKEGPTSSPTSSPPSPPPEGIVPTGSPGPSPRPPPPPPGGNGAASISRGMMVGGAVGGALLAMVFA

A0A5A7UE17 Classical arabinogalactan protein 93.7e-4681.03Show/hide
Query:  MKMGFQFVMVLALFATSCMAQAPSGAPAQPPTTPAVPPPSTPPPTASPPPATPPPATPPPATPPPATPPTATPPPATPPPASTPPSSPPTSAPTSPPPAS
        MKMGFQFVM LALFATSCMAQAP  APAQPP+TPAVPPPSTPPP ASPPPATPPPATPPPATPPPATPP A+ PP      S+PPS PP S PTSPPP+S
Subjt:  MKMGFQFVMVLALFATSCMAQAPSGAPAQPPTTPAVPPPSTPPPTASPPPATPPPATPPPATPPPATPPTATPPPATPPPASTPPSSPPTSAPTSPPPAS

Query:  PNSSPTPPPKEGPTSSPTSSPPSPPPEGIVPTGSPGPSPRPPPPPPGGNGAASISRGMMVGGAVGGALLAMVFA
        P+S PT PPKEGP S PTSSPPSPPPEG VPT SPGPS  PPPPPP GNGAAS+SRGMMVGGAV GA LAM+FA
Subjt:  PNSSPTPPPKEGPTSSPTSSPPSPPPEGIVPTGSPGPSPRPPPPPPGGNGAASISRGMMVGGAVGGALLAMVFA

A0A5D3CV77 Vegetative cell wall protein gp13.7e-4681.03Show/hide
Query:  MKMGFQFVMVLALFATSCMAQAPSGAPAQPPTTPAVPPPSTPPPTASPPPATPPPATPPPATPPPATPPTATPPPATPPPASTPPSSPPTSAPTSPPPAS
        MKMGFQFVM LALFATSCMAQAP  APAQPP+TPAVPPPSTPPP ASPPPATPPPATPPPATPPPATPP A+ PP      S+PPS PP S PTSPPP+S
Subjt:  MKMGFQFVMVLALFATSCMAQAPSGAPAQPPTTPAVPPPSTPPPTASPPPATPPPATPPPATPPPATPPTATPPPATPPPASTPPSSPPTSAPTSPPPAS

Query:  PNSSPTPPPKEGPTSSPTSSPPSPPPEGIVPTGSPGPSPRPPPPPPGGNGAASISRGMMVGGAVGGALLAMVFA
        P+S PT PPKEGP S PTSSPPSPPPEG VPT SPGPS  PPPPPP GNGAAS+SRGMMVGGAV GA LAM+FA
Subjt:  PNSSPTPPPKEGPTSSPTSSPPSPPPEGIVPTGSPGPSPRPPPPPPGGNGAASISRGMMVGGAVGGALLAMVFA

A0A6J1J5L5 classical arabinogalactan protein 4-like5.9e-3672.88Show/hide
Query:  MKMGFQFVMVLALFATSCMAQAPSGAPAQPPTTPAVPPPSTPPPTASPPPATPPPATPPPATPPPATPPTATPPPATPPPASTPPSSPPTSAPTSPPPAS
        MKMGFQFVMVLALFATS MAQAP  APAQPPTTPAVPPPSTPPP  +       PATPPPA    ATPP ATPPPA  PP S PPSSPPT      PPAS
Subjt:  MKMGFQFVMVLALFATSCMAQAPSGAPAQPPTTPAVPPPSTPPPTASPPPATPPPATPPPATPPPATPPTATPPPATPPPASTPPSSPPTSAPTSPPPAS

Query:  PNSSPTPPPKEGPTSSPT---SSPPSPPPEGIVPTGSPGPSPRPPPPPPGGNGAASISRGMMVGGAVGGALLAMVFA
        P +SPTPPPKEGP SSPT   +SPPSPP EG+VP+ SPGP+   PPPPPG NGAA++SRG+MVGGAV GALLAMVFA
Subjt:  PNSSPTPPPKEGPTSSPT---SSPPSPPPEGIVPTGSPGPSPRPPPPPPGGNGAASISRGMMVGGAVGGALLAMVFA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATGGGTTTCCAATTTGTAATGGTTTTAGCCTTATTTGCCACTTCTTGTATGGCTCAGGCTCCCAGTGGTGCTCCGGCTCAGCCGCCCACCACCCCCGCCGTCCC
TCCCCCGTCAACTCCTCCTCCGACCGCCTCCCCACCTCCCGCCACCCCTCCTCCGGCAACACCTCCTCCGGCAACCCCACCACCAGCCACCCCTCCAACCGCCACCCCAC
CACCGGCCACCCCTCCCCCGGCTTCGACCCCACCATCATCGCCCCCAACTTCAGCTCCTACGTCTCCACCACCGGCATCACCTAACTCCTCTCCGACCCCGCCACCAAAG
GAGGGTCCAACCTCATCTCCGACTTCATCACCACCATCACCACCACCAGAAGGAATTGTCCCGACAGGCAGCCCAGGACCGAGCCCGCGGCCACCCCCACCCCCACCGGG
AGGAAATGGCGCAGCAAGCATTAGTCGGGGAATGATGGTGGGCGGCGCGGTGGGCGGAGCTTTGTTGGCAATGGTATTTGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAATGGGTTTCCAATTTGTAATGGTTTTAGCCTTATTTGCCACTTCTTGTATGGCTCAGGCTCCCAGTGGTGCTCCGGCTCAGCCGCCCACCACCCCCGCCGTCCC
TCCCCCGTCAACTCCTCCTCCGACCGCCTCCCCACCTCCCGCCACCCCTCCTCCGGCAACACCTCCTCCGGCAACCCCACCACCAGCCACCCCTCCAACCGCCACCCCAC
CACCGGCCACCCCTCCCCCGGCTTCGACCCCACCATCATCGCCCCCAACTTCAGCTCCTACGTCTCCACCACCGGCATCACCTAACTCCTCTCCGACCCCGCCACCAAAG
GAGGGTCCAACCTCATCTCCGACTTCATCACCACCATCACCACCACCAGAAGGAATTGTCCCGACAGGCAGCCCAGGACCGAGCCCGCGGCCACCCCCACCCCCACCGGG
AGGAAATGGCGCAGCAAGCATTAGTCGGGGAATGATGGTGGGCGGCGCGGTGGGCGGAGCTTTGTTGGCAATGGTATTTGCTTAG
Protein sequenceShow/hide protein sequence
MKMGFQFVMVLALFATSCMAQAPSGAPAQPPTTPAVPPPSTPPPTASPPPATPPPATPPPATPPPATPPTATPPPATPPPASTPPSSPPTSAPTSPPPASPNSSPTPPPK
EGPTSSPTSSPPSPPPEGIVPTGSPGPSPRPPPPPPGGNGAASISRGMMVGGAVGGALLAMVFA