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HG10011829 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011829
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPlant transposase
Genome locationChr01:13369891..13370157
RNA-Seq ExpressionHG10011829
SyntenyHG10011829
Gene Ontology termsNA
InterPro domainsIPR004264 - Transposase, Tnp1/En/Spm-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032201.1 Plant transposase [Cucumis melo var. makuwa]1.8e-2771.79Show/hide
Query:  MLLDWSGSREVIVEGRWSSNDPKTLGHHIPLGPNAVLVWVDTVRKSEIFLWRPTSDMVIIDDALDTIIAWPADKVKIC
        +LLDW GS EVI EGRWSSNDP  L HH+PLGPNAV VWVDTV+    FLWRPTSD+++IDDAL T +AWP DKVK+C
Subjt:  MLLDWSGSREVIVEGRWSSNDPKTLGHHIPLGPNAVLVWVDTVRKSEIFLWRPTSDMVIIDDALDTIIAWPADKVKIC

KAA0051001.1 Plant transposase [Cucumis melo var. makuwa]8.9e-2770.51Show/hide
Query:  MLLDWSGSREVIVEGRWSSNDPKTLGHHIPLGPNAVLVWVDTVRKSEIFLWRPTSDMVIIDDALDTIIAWPADKVKIC
        +LLDW GS EVI EGRWSSNDP  L HH+PLGPNAV VWVDTV+    FLWRPT D+++IDDAL T +AWP DKVK+C
Subjt:  MLLDWSGSREVIVEGRWSSNDPKTLGHHIPLGPNAVLVWVDTVRKSEIFLWRPTSDMVIIDDALDTIIAWPADKVKIC

KAA0057491.1 Plant transposase [Cucumis melo var. makuwa]1.8e-2771.79Show/hide
Query:  MLLDWSGSREVIVEGRWSSNDPKTLGHHIPLGPNAVLVWVDTVRKSEIFLWRPTSDMVIIDDALDTIIAWPADKVKIC
        +LLDW GS EVI EGRWSSNDP  L HH+PLGPNAV VWVDTV+    FLWRPTSD+++IDDAL T +AWP DKVK+C
Subjt:  MLLDWSGSREVIVEGRWSSNDPKTLGHHIPLGPNAVLVWVDTVRKSEIFLWRPTSDMVIIDDALDTIIAWPADKVKIC

XP_022154305.1 uncharacterized protein LOC111021601 isoform X1 [Momordica charantia]4.0e-2775.32Show/hide
Query:  MLLDWSGSREVIVEGRWSSNDPKTLGHHIPLGPNAVLVWVDTVRKSEIFLWRPTSDMVIIDDALDTIIAWPADKVKI
        MLLDW GS +VI EGRWSSNDP  L HHIPLGPN V VWVDTV+K   +LWRPTSDM++ID+AL T IAWPADKVKI
Subjt:  MLLDWSGSREVIVEGRWSSNDPKTLGHHIPLGPNAVLVWVDTVRKSEIFLWRPTSDMVIIDDALDTIIAWPADKVKI

XP_022154306.1 uncharacterized protein LOC111021601 isoform X2 [Momordica charantia]4.0e-2775.32Show/hide
Query:  MLLDWSGSREVIVEGRWSSNDPKTLGHHIPLGPNAVLVWVDTVRKSEIFLWRPTSDMVIIDDALDTIIAWPADKVKI
        MLLDW GS +VI EGRWSSNDP  L HHIPLGPN V VWVDTV+K   +LWRPTSDM++ID+AL T IAWPADKVKI
Subjt:  MLLDWSGSREVIVEGRWSSNDPKTLGHHIPLGPNAVLVWVDTVRKSEIFLWRPTSDMVIIDDALDTIIAWPADKVKI

TrEMBL top hitse value%identityAlignment
A0A5A7SRN7 Plant transposase8.6e-2871.79Show/hide
Query:  MLLDWSGSREVIVEGRWSSNDPKTLGHHIPLGPNAVLVWVDTVRKSEIFLWRPTSDMVIIDDALDTIIAWPADKVKIC
        +LLDW GS EVI EGRWSSNDP  L HH+PLGPNAV VWVDTV+    FLWRPTSD+++IDDAL T +AWP DKVK+C
Subjt:  MLLDWSGSREVIVEGRWSSNDPKTLGHHIPLGPNAVLVWVDTVRKSEIFLWRPTSDMVIIDDALDTIIAWPADKVKIC

A0A5A7UBP2 Plant transposase4.3e-2770.51Show/hide
Query:  MLLDWSGSREVIVEGRWSSNDPKTLGHHIPLGPNAVLVWVDTVRKSEIFLWRPTSDMVIIDDALDTIIAWPADKVKIC
        +LLDW GS EVI EGRWSSNDP  L HH+PLGPNAV VWVDTV+    FLWRPT D+++IDDAL T +AWP DKVK+C
Subjt:  MLLDWSGSREVIVEGRWSSNDPKTLGHHIPLGPNAVLVWVDTVRKSEIFLWRPTSDMVIIDDALDTIIAWPADKVKIC

A0A5A7UVF2 Plant transposase8.6e-2871.79Show/hide
Query:  MLLDWSGSREVIVEGRWSSNDPKTLGHHIPLGPNAVLVWVDTVRKSEIFLWRPTSDMVIIDDALDTIIAWPADKVKIC
        +LLDW GS EVI EGRWSSNDP  L HH+PLGPNAV VWVDTV+    FLWRPTSD+++IDDAL T +AWP DKVK+C
Subjt:  MLLDWSGSREVIVEGRWSSNDPKTLGHHIPLGPNAVLVWVDTVRKSEIFLWRPTSDMVIIDDALDTIIAWPADKVKIC

A0A6J1DJ93 uncharacterized protein LOC111021601 isoform X11.9e-2775.32Show/hide
Query:  MLLDWSGSREVIVEGRWSSNDPKTLGHHIPLGPNAVLVWVDTVRKSEIFLWRPTSDMVIIDDALDTIIAWPADKVKI
        MLLDW GS +VI EGRWSSNDP  L HHIPLGPN V VWVDTV+K   +LWRPTSDM++ID+AL T IAWPADKVKI
Subjt:  MLLDWSGSREVIVEGRWSSNDPKTLGHHIPLGPNAVLVWVDTVRKSEIFLWRPTSDMVIIDDALDTIIAWPADKVKI

A0A6J1DNC0 uncharacterized protein LOC111021601 isoform X21.9e-2775.32Show/hide
Query:  MLLDWSGSREVIVEGRWSSNDPKTLGHHIPLGPNAVLVWVDTVRKSEIFLWRPTSDMVIIDDALDTIIAWPADKVKI
        MLLDW GS +VI EGRWSSNDP  L HHIPLGPN V VWVDTV+K   +LWRPTSDM++ID+AL T IAWPADKVKI
Subjt:  MLLDWSGSREVIVEGRWSSNDPKTLGHHIPLGPNAVLVWVDTVRKSEIFLWRPTSDMVIIDDALDTIIAWPADKVKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCTAGATTGGTCTGGCTCTAGAGAAGTAATTGTTGAAGGAAGATGGTCTTCTAATGATCCAAAAACATTGGGCCATCATATCCCTCTTGGTCCAAATGCG
GTGCTCGTGTGGGTTGATACAGTAAGGAAGTCTGAAATATTTTTATGGAGGCCTACTTCTGACATGGTTATCATTGATGATGCATTAGACACCATTATTGCTTGG
CCAGCTGATAAAGTCAAAATATGTAAGCAATTTTTTTTTGTCAACTTGCATCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCTAGATTGGTCTGGCTCTAGAGAAGTAATTGTTGAAGGAAGATGGTCTTCTAATGATCCAAAAACATTGGGCCATCATATCCCTCTTGGTCCAAATGCG
GTGCTCGTGTGGGTTGATACAGTAAGGAAGTCTGAAATATTTTTATGGAGGCCTACTTCTGACATGGTTATCATTGATGATGCATTAGACACCATTATTGCTTGG
CCAGCTGATAAAGTCAAAATATGTAAGCAATTTTTTTTTGTCAACTTGCATCGTTGA
Protein sequenceShow/hide protein sequence
MLLDWSGSREVIVEGRWSSNDPKTLGHHIPLGPNAVLVWVDTVRKSEIFLWRPTSDMVIIDDALDTIIAWPADKVKICKQFFFVNLHR