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HG10011830 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011830
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProtein Ycf2
Genome locationChr01:13393887..13394039
RNA-Seq ExpressionHG10011830
SyntenyHG10011830
Gene Ontology termsGO:0009570 - chloroplast stroma (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR008543 - Uncharacterised protein family Ycf2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AOW68576.1 hypothetical chloroplast RF21 [Afzelia africana]6.4e-14100Show/hide
Query:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
        LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
Subjt:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
YP_009468904.1 hypothetical chloroplast RF2 [Gynostemma compressum]6.4e-14100Show/hide
Query:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
        LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
Subjt:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
YP_009707932.1 hypothetical protein RF2 [Begonia pulchrifolia]6.4e-14100Show/hide
Query:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
        LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
Subjt:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
YP_009752370.1 Ycf2 protein [Bryonia marmorata]6.4e-14100Show/hide
Query:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
        LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
Subjt:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
YP_010158132.1 hypothetical protein RF2 [Afzelia xylocarpa]6.4e-14100Show/hide
Query:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
        LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
Subjt:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
TrEMBL top hitse value%identityAlignment
A0A249RYX8 Protein Ycf23.1e-14100Show/hide
Query:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
        LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
Subjt:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
A0A2H4T233 Protein Ycf23.1e-14100Show/hide
Query:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
        LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
Subjt:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
A0A343F2F1 Protein Ycf23.1e-14100Show/hide
Query:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
        LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
Subjt:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
A0A6H0ET42 Protein Ycf23.1e-14100Show/hide
Query:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
        LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
Subjt:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
A0A6H0EV63 Protein Ycf23.1e-14100Show/hide
Query:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
        LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
Subjt:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
SwissProt top hitse value%identityAlignment
A0ZZ78 Protein Ycf21.7e-1495.12Show/hide
Query:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
        LKNLFLVALEQLGDSLEEI GSA GGNMLWGGGPAYGVKSI
Subjt:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
A4GYV4 Protein Ycf21.7e-1495.12Show/hide
Query:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
        LKNLFLVALEQLGD LEEI GSASGGNMLWGGGPAYGVKSI
Subjt:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
Q14F97 Protein Ycf21.7e-1495.12Show/hide
Query:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
        LKNLFLVALEQLGD LEEI GSASGGNMLWGGGPAYGVKSI
Subjt:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
Q2L949 Protein Ycf21.7e-1495.12Show/hide
Query:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
        LKNLFLVALEQLGDSLEEI GSA GGNMLWGGGPAYGVKSI
Subjt:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
Q589A6 Protein Ycf21.7e-1495.12Show/hide
Query:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
        LKNLFLVALEQLGDSLEEIWGSASGGNM  GGGPAYGVKSI
Subjt:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
Arabidopsis top hitse value%identityAlignment
ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core1.7e-1287.8Show/hide
Query:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
        LKNLFLVALEQLGD LEEI G  SGGNMLWGG PAYGVKSI
Subjt:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core1.7e-1287.8Show/hide
Query:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI
        LKNLFLVALEQLGD LEEI G  SGGNMLWGG PAYGVKSI
Subjt:  LKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGATTAAAGAATCTCTTTCTAGTTGCTCTGGAACAATTAGGAGATTCTCTAGAAGAAATATGGGGTTCTGCTTCTGGTGGCAACATGCTATGGGGTGGC
GGTCCCGCTTATGGGGTCAAATCAATCTCTGAAGTAGATGATGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGATTAAAGAATCTCTTTCTAGTTGCTCTGGAACAATTAGGAGATTCTCTAGAAGAAATATGGGGTTCTGCTTCTGGTGGCAACATGCTATGGGGTGGC
GGTCCCGCTTATGGGGTCAAATCAATCTCTGAAGTAGATGATGGTTGA
Protein sequenceShow/hide protein sequence
MERLKNLFLVALEQLGDSLEEIWGSASGGNMLWGGGPAYGVKSISEVDDG