; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10011863 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011863
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr01:14197398..14198015
RNA-Seq ExpressionHG10011863
SyntenyHG10011863
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057401.1 hypothetical protein E6C27_scaffold280G002750 [Cucumis melo var. makuwa]1.6e-1041.43Show/hide
Query:  VSRRRARLLKPFPKHFARKKTSFLNSWSTIVNSNLLENCCVKIQILEITLKRSVDSSSKPSPFIHSEFTISGSNVNFVRG--IPSNSSSSTHLSQQDSDA
        V +R   L KPF K F+RK+TSF NSW+ I N +LLE  CVK+Q+  I   +SV SSS  +   HS  +    +V+ VRG  IP            DS+ 
Subjt:  VSRRRARLLKPFPKHFARKKTSFLNSWSTIVNSNLLENCCVKIQILEITLKRSVDSSSKPSPFIHSEFTISGSNVNFVRG--IPSNSSSSTHLSQQDSDA

Query:  DSVVSASSEELEVYESEEDLEVDDGEVCFSKDLHNLFQTE
        +SVVS SSE+LE  E +E    ++     +K L  LFQ E
Subjt:  DSVVSASSEELEVYESEEDLEVDDGEVCFSKDLHNLFQTE

XP_038876689.1 uncharacterized protein LOC120069082 isoform X1 [Benincasa hispida]9.6e-0833.52Show/hide
Query:  SVSRRRARLLKPFPKHFARKKTSFLNSWSTIVNSNLLENCCVKIQILEITLKRSVDSSSKPSPFIHSEFTISGSNVN----FVRGIPSNSSSSTHLSQQD
        S+  R + LLKPFPK+F R+K+S + +WS + NSNLLE+CC ++QI     +RSV   + PS    S     G N++    +V+G P +   S  L Q+ 
Subjt:  SVSRRRARLLKPFPKHFARKKTSFLNSWSTIVNSNLLENCCVKIQILEITLKRSVDSSSKPSPFIHSEFTISGSNVN----FVRGIPSNSSSSTHLSQQD

Query:  SDADSVVSASSEELEVYESEEDLEVDDGEVCFSKDLHNLFQTEVCQLQRQTKVFSFPPLIKDAIPPNLISIVEDCDIIL
         +A S+ S SSE+L+  +     +  + +     +L+ LF  E    + Q      PP   + +P  L S +  CDI L
Subjt:  SDADSVVSASSEELEVYESEEDLEVDDGEVCFSKDLHNLFQTEVCQLQRQTKVFSFPPLIKDAIPPNLISIVEDCDIIL

XP_038887514.1 RNA-binding protein 39-like isoform X1 [Benincasa hispida]1.3e-0961.11Show/hide
Query:  SRRRARLLKPFPKHFARKKTSFLNSWSTIVNSNLLENCCVKIQILEITLKRSVD
        S++ +RLLKPFP+HF RKKTSF NSW+T+ NS+LLE CCVK+QI +    R V+
Subjt:  SRRRARLLKPFPKHFARKKTSFLNSWSTIVNSNLLENCCVKIQILEITLKRSVD

XP_038887873.1 ABC transporter C family member 2-like isoform X1 [Benincasa hispida]7.1e-1146.36Show/hide
Query:  SEFTISGSNVNFVRGIPSNSSSSTHLSQQDSDADSVVSASSEELEVYESEEDLEVDDGEVCFSKDLHNLFQTEVCQLQRQTKVFSFPPLIKDAIPPNLIS
        S F ISGS+V FVRG   +       ++ DSD DS+ SAS EELE  E+E   E ++    +  DL  LFQ+   QL   T V S  P+ K  IP NL+S
Subjt:  SEFTISGSNVNFVRGIPSNSSSSTHLSQQDSDADSVVSASSEELEVYESEEDLEVDDGEVCFSKDLHNLFQTEVCQLQRQTKVFSFPPLIKDAIPPNLIS

Query:  IVEDCDIILG
        +VEDCD+ILG
Subjt:  IVEDCDIILG

XP_038887874.1 ABC transporter C family member 2-like isoform X2 [Benincasa hispida]7.1e-1146.36Show/hide
Query:  SEFTISGSNVNFVRGIPSNSSSSTHLSQQDSDADSVVSASSEELEVYESEEDLEVDDGEVCFSKDLHNLFQTEVCQLQRQTKVFSFPPLIKDAIPPNLIS
        S F ISGS+V FVRG   +       ++ DSD DS+ SAS EELE  E+E   E ++    +  DL  LFQ+   QL   T V S  P+ K  IP NL+S
Subjt:  SEFTISGSNVNFVRGIPSNSSSSTHLSQQDSDADSVVSASSEELEVYESEEDLEVDDGEVCFSKDLHNLFQTEVCQLQRQTKVFSFPPLIKDAIPPNLIS

Query:  IVEDCDIILG
        +VEDCD+ILG
Subjt:  IVEDCDIILG

TrEMBL top hitse value%identityAlignment
A0A0A0KHK4 Uncharacterized protein7.4e-0643.59Show/hide
Query:  SNPSVSRRRARLLKPFPKHFARKKTSFLNSWSTIVNSNLLENCCVKIQILEITLKRSVDSSSKPSPFIHSEFTISGSN
        ++  VS+R + L K F KHFARKKTSF NSW+ I N ++LE  CVKIQ+  +   RS        P ++   + SG N
Subjt:  SNPSVSRRRARLLKPFPKHFARKKTSFLNSWSTIVNSNLLENCCVKIQILEITLKRSVDSSSKPSPFIHSEFTISGSN

A0A5A7UV76 Uncharacterized protein7.7e-1141.43Show/hide
Query:  VSRRRARLLKPFPKHFARKKTSFLNSWSTIVNSNLLENCCVKIQILEITLKRSVDSSSKPSPFIHSEFTISGSNVNFVRG--IPSNSSSSTHLSQQDSDA
        V +R   L KPF K F+RK+TSF NSW+ I N +LLE  CVK+Q+  I   +SV SSS  +   HS  +    +V+ VRG  IP            DS+ 
Subjt:  VSRRRARLLKPFPKHFARKKTSFLNSWSTIVNSNLLENCCVKIQILEITLKRSVDSSSKPSPFIHSEFTISGSNVNFVRG--IPSNSSSSTHLSQQDSDA

Query:  DSVVSASSEELEVYESEEDLEVDDGEVCFSKDLHNLFQTE
        +SVVS SSE+LE  E +E    ++     +K L  LFQ E
Subjt:  DSVVSASSEELEVYESEEDLEVDDGEVCFSKDLHNLFQTE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGAAGATGAAAATAACTCTATTGTCGCTAGAAATTCTATCCTGGAAAATGAAAAGTCTTCCCCAGCATTTGGTTCAAACCCAAGTGTTTCCAGAAGACGTGCTAG
ATTGTTAAAGCCATTTCCCAAGCACTTTGCCAGGAAGAAAACTTCATTCCTCAATTCTTGGTCGACAATAGTGAATTCAAACTTGCTTGAGAATTGTTGTGTAAAGATTC
AAATTCTTGAAATCACTCTAAAAAGGTCTGTAGATTCTTCTTCTAAGCCTTCCCCTTTCATCCATTCTGAATTTACAATCTCAGGATCCAATGTTAATTTTGTGCGAGGA
ATTCCGAGCAACTCTTCAAGTTCCACTCATCTTAGCCAACAAGATTCGGACGCAGACTCTGTGGTGAGTGCAAGCAGTGAAGAGTTGGAAGTTTATGAATCAGAGGAAGA
TCTGGAAGTGGATGATGGTGAAGTTTGTTTTAGTAAAGATTTACATAATTTATTTCAAACAGAAGTTTGCCAGCTGCAAAGACAGACTAAAGTTTTCTCCTTCCCTCCAC
TCATTAAAGATGCAATTCCCCCAAATCTAATCTCTATCGTTGAAGATTGTGACATTATCCTTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGAAGATGAAAATAACTCTATTGTCGCTAGAAATTCTATCCTGGAAAATGAAAAGTCTTCCCCAGCATTTGGTTCAAACCCAAGTGTTTCCAGAAGACGTGCTAG
ATTGTTAAAGCCATTTCCCAAGCACTTTGCCAGGAAGAAAACTTCATTCCTCAATTCTTGGTCGACAATAGTGAATTCAAACTTGCTTGAGAATTGTTGTGTAAAGATTC
AAATTCTTGAAATCACTCTAAAAAGGTCTGTAGATTCTTCTTCTAAGCCTTCCCCTTTCATCCATTCTGAATTTACAATCTCAGGATCCAATGTTAATTTTGTGCGAGGA
ATTCCGAGCAACTCTTCAAGTTCCACTCATCTTAGCCAACAAGATTCGGACGCAGACTCTGTGGTGAGTGCAAGCAGTGAAGAGTTGGAAGTTTATGAATCAGAGGAAGA
TCTGGAAGTGGATGATGGTGAAGTTTGTTTTAGTAAAGATTTACATAATTTATTTCAAACAGAAGTTTGCCAGCTGCAAAGACAGACTAAAGTTTTCTCCTTCCCTCCAC
TCATTAAAGATGCAATTCCCCCAAATCTAATCTCTATCGTTGAAGATTGTGACATTATCCTTGGTTGA
Protein sequenceShow/hide protein sequence
MNEDENNSIVARNSILENEKSSPAFGSNPSVSRRRARLLKPFPKHFARKKTSFLNSWSTIVNSNLLENCCVKIQILEITLKRSVDSSSKPSPFIHSEFTISGSNVNFVRG
IPSNSSSSTHLSQQDSDADSVVSASSEELEVYESEEDLEVDDGEVCFSKDLHNLFQTEVCQLQRQTKVFSFPPLIKDAIPPNLISIVEDCDIILG