; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10011880 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011880
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr01:14541048..14542068
RNA-Seq ExpressionHG10011880
SyntenyHG10011880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038875107.1 nucleophosmin-like [Benincasa hispida]1.8e-2950.23Show/hide
Query:  ISIERKIASLQEGIEELKQRQEDIKKDIYEKHKEILDILGNIKEAINDILPPKEEDASLELLDASLELIDVGGKENEVETAEDKKAQENDQQKQDNENVK
        +SI R+IASLQE IEELK+ QEDIKKDI EK+KEILDILG+IKEAI+D L  K  + +   + A            E++TA+D++AQ++   +++++ V+
Subjt:  ISIERKIASLQEGIEELKQRQEDIKKDIYEKHKEILDILGNIKEAINDILPPKEEDASLELLDASLELIDVGGKENEVETAEDKKAQENDQQKQDNENVK

Query:  VQDEEKDREEERDKEKEEEENVDEENRTKKENDKKKVVEKTLRKSPKKYRPKVAARDELVVEKSQKRQTKTTKKILENAKNPKKDKK-----VSPKVSPS
        + D+ +D EE            D+E + K++  KKKV+EKTL+ SP KYRPKV   + +   K  KRQ K T KILENAK  KKDKK     VS KVSPS
Subjt:  VQDEEKDREEERDKEKEEEENVDEENRTKKENDKKKVVEKTLRKSPKKYRPKVAARDELVVEKSQKRQTKTTKKILENAKNPKKDKK-----VSPKVSPS

Query:  KNTRHSLRWKDDAPSFDLKIS
        K  R S RW D APSFDLKIS
Subjt:  KNTRHSLRWKDDAPSFDLKIS

XP_038880505.1 glutamic acid-rich protein-like [Benincasa hispida]1.6e-3854.72Show/hide
Query:  ELSRKEMQMEKEKE--EKQISIERKIASLQEGIEELKQRQEDIKKDIYEKHKEILDILGNIKEAINDILPPKEE------------DASLELLDASLELI
        EL  +EM +EKEKE   K   I R+IASLQE IEELK+ QEDIKKDI EKHKEILDILG+IKE+I+D LP KE+             +SLELLDASLE++
Subjt:  ELSRKEMQMEKEKE--EKQISIERKIASLQEGIEELKQRQEDIKKDIYEKHKEILDILGNIKEAINDILPPKEE------------DASLELLDASLELI

Query:  DVGGKENEVETAEDKKAQENDQQKQDNENVKVQDEEKDREEERDKEKEEEENVDEENRTKKENDKKKVVEKTLRKSPKKYRPKVAARDELVVEKSQKRQT
             E EV+T +DK+AQ+              D+E D++E+   + E+EE  D+E + K++  KK V+EKTL+KSPKKYRPKV     +   K  KRQ 
Subjt:  DVGGKENEVETAEDKKAQENDQQKQDNENVKVQDEEKDREEERDKEKEEEENVDEENRTKKENDKKKVVEKTLRKSPKKYRPKVAARDELVVEKSQKRQT

Query:  KTTKKILENAKNPKKDKK-----VSPKVSPSKNTRHSLRWKDDAPSFDLKISQL
        K TKKILENAK  KKDKK     VS KVSPSK TR S  W D+APSFDLKISQL
Subjt:  KTTKKILENAKNPKKDKK-----VSPKVSPSKNTRHSLRWKDDAPSFDLKISQL

XP_038885971.1 chromatin modification-related protein EAF7-like [Benincasa hispida]6.9e-3452.08Show/hide
Query:  ELSRKEMQMEKEKEEKQISIERKIASLQEGIEELKQRQEDIKKDIYEKHKEILDILGNIKEAINDILPPKEEDASLELLDASLELIDVGGKENEVETAED
        EL  +EM +EKEK+ KQ+SIER+I SLQE IEELK+ QEDIKKDI EKHKEILDILG IK+A                               +V+TA+D
Subjt:  ELSRKEMQMEKEKEEKQISIERKIASLQEGIEELKQRQEDIKKDIYEKHKEILDILGNIKEAINDILPPKEEDASLELLDASLELIDVGGKENEVETAED

Query:  KKAQENDQQKQDNENVKVQDEEKDREEERDKEKEEEENVDEENRTKKENDKKKVVEKTLRKSPKKYRPKVAARDELVVEKSQKRQTKTTKKILENAKNPK
        KKAQ+              D+E D++E+   + E+EE  D+E + K++  K  V+EKTL+KSPKKYRPKV   + +   K  KRQTK TKKILENAK  K
Subjt:  KKAQENDQQKQDNENVKVQDEEKDREEERDKEKEEEENVDEENRTKKENDKKKVVEKTLRKSPKKYRPKVAARDELVVEKSQKRQTKTTKKILENAKNPK

Query:  KDKK-----VSPKVSPSKNTRHSLRWKDDAPSFDLKISQL
        KDKK     VS KVS SK TRHS RW DD PSFDLKISQL
Subjt:  KDKK-----VSPKVSPSKNTRHSLRWKDDAPSFDLKISQL

XP_038891747.1 pescadillo homolog [Benincasa hispida]5.8e-3351.41Show/hide
Query:  QMEKEKEEKQISIERKIASLQEGIEELKQRQEDIKKDIYEKHKEILDILGNIKEAINDILPPKEE----------------DASLELLDASLELIDVGGK
        Q E ++      I   I      IEELK+ QEDIKKDI EKHKEILDILG+IK+AI+D LP KEE                 +SLELLDASLE++     
Subjt:  QMEKEKEEKQISIERKIASLQEGIEELKQRQEDIKKDIYEKHKEILDILGNIKEAINDILPPKEE----------------DASLELLDASLELIDVGGK

Query:  ENEVETAEDKKAQENDQQKQDNENVKVQDEEKDREEERDKEKEEEENVDEENRTKKENDKKKVVEKTLRKSPKKYRPKVAARDELVVEKSQKRQTKTTKK
        E EV TA+DK+AQ+              D+E D++E+   + E+EE  D+E + K++  KK V+EKTL+KS KKYRPKV   + +   K  KRQ K TKK
Subjt:  ENEVETAEDKKAQENDQQKQDNENVKVQDEEKDREEERDKEKEEEENVDEENRTKKENDKKKVVEKTLRKSPKKYRPKVAARDELVVEKSQKRQTKTTKK

Query:  ILENAKNPKKDKK-----VSPKVSPSKNTRHSLRWKDDAPSFDLKISQL
        ILENAK  KKDKK     VS KVSPSK TR S RW DDAPSFDLKISQL
Subjt:  ILENAKNPKKDKK-----VSPKVSPSKNTRHSLRWKDDAPSFDLKISQL

XP_038896339.1 myb-like protein X [Benincasa hispida]1.3e-2756.98Show/hide
Query:  LPPK--EEDASLELLDASLELI-DVGGKENEVETAEDKKAQENDQQKQDNENVKVQDEEKDREEERDKEKEEEENVDEENRTKKENDKKKVVEKTLRKSP
        +PP   E +A++E     ++   D   +EN+V+  ED +AQENDQQKQDNENV++QDEEKD     D+EK++EE +D     K + +++KV E TLRKSP
Subjt:  LPPK--EEDASLELLDASLELI-DVGGKENEVETAEDKKAQENDQQKQDNENVKVQDEEKDREEERDKEKEEEENVDEENRTKKENDKKKVVEKTLRKSP

Query:  KKYRPKVAAR--DELVVEKSQKRQTKTTKKILENAKNPKKDK-----KVSPKVSPSKNTRHSLRWKDDAPSFDLKISQL
        KKYRPKVA +  DE VVE   KRQT+ TKKILEN +N K+DK     KVSPKVSPSK TRHS  WKDDAPSF++KISQL
Subjt:  KKYRPKVAAR--DELVVEKSQKRQTKTTKKILENAKNPKKDK-----KVSPKVSPSKNTRHSLRWKDDAPSFDLKISQL

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTATCAAGAAAGGAGATGCAGATGGAAAAGGAAAAAGAAGAGAAACAAATATCAATTGAAAGAAAAATAGCTTCATTACAAGAAGGTATTGAAGAATTAAAACA
AAGACAAGAAGACATTAAGAAAGACATTTATGAAAAACATAAGGAGATTCTTGATATATTGGGCAACATAAAAGAAGCTATCAATGATATACTTCCACCAAAAGAAGAAG
ATGCAAGTTTGGAGCTTTTAGATGCAAGTTTGGAACTTATAGATGTTGGAGGTAAAGAGAATGAAGTTGAAACTGCGGAGGACAAGAAGGCTCAAGAAAATGACCAACAG
AAGCAAGATAATGAAAATGTAAAAGTGCAAGATGAAGAGAAAGATCGGGAAGAAGAAAGAGATAAAGAAAAAGAAGAGGAAGAGAATGTAGATGAAGAAAATAGAACCAA
AAAGGAGAACGATAAAAAGAAGGTTGTTGAAAAGACTCTTAGAAAGAGTCCAAAAAAATATAGACCAAAGGTTGCAGCTAGGGACGAGCTTGTTGTTGAGAAGAGCCAAA
AGAGACAAACAAAAACAACCAAGAAAATTCTGGAGAATGCAAAAAATCCAAAAAAGGACAAAAAAGTATCTCCAAAGGTTTCTCCAAGCAAAAATACAAGGCATTCTCTA
AGGTGGAAGGATGATGCTCCAAGCTTTGATCTCAAAATATCACAACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCTATCAAGAAAGGAGATGCAGATGGAAAAGGAAAAAGAAGAGAAACAAATATCAATTGAAAGAAAAATAGCTTCATTACAAGAAGGTATTGAAGAATTAAAACA
AAGACAAGAAGACATTAAGAAAGACATTTATGAAAAACATAAGGAGATTCTTGATATATTGGGCAACATAAAAGAAGCTATCAATGATATACTTCCACCAAAAGAAGAAG
ATGCAAGTTTGGAGCTTTTAGATGCAAGTTTGGAACTTATAGATGTTGGAGGTAAAGAGAATGAAGTTGAAACTGCGGAGGACAAGAAGGCTCAAGAAAATGACCAACAG
AAGCAAGATAATGAAAATGTAAAAGTGCAAGATGAAGAGAAAGATCGGGAAGAAGAAAGAGATAAAGAAAAAGAAGAGGAAGAGAATGTAGATGAAGAAAATAGAACCAA
AAAGGAGAACGATAAAAAGAAGGTTGTTGAAAAGACTCTTAGAAAGAGTCCAAAAAAATATAGACCAAAGGTTGCAGCTAGGGACGAGCTTGTTGTTGAGAAGAGCCAAA
AGAGACAAACAAAAACAACCAAGAAAATTCTGGAGAATGCAAAAAATCCAAAAAAGGACAAAAAAGTATCTCCAAAGGTTTCTCCAAGCAAAAATACAAGGCATTCTCTA
AGGTGGAAGGATGATGCTCCAAGCTTTGATCTCAAAATATCACAACTTTGA
Protein sequenceShow/hide protein sequence
MELSRKEMQMEKEKEEKQISIERKIASLQEGIEELKQRQEDIKKDIYEKHKEILDILGNIKEAINDILPPKEEDASLELLDASLELIDVGGKENEVETAEDKKAQENDQQ
KQDNENVKVQDEEKDREEERDKEKEEEENVDEENRTKKENDKKKVVEKTLRKSPKKYRPKVAARDELVVEKSQKRQTKTTKKILENAKNPKKDKKVSPKVSPSKNTRHSL
RWKDDAPSFDLKISQL