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HG10011940 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011940
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionzinc transporter 5
Genome locationChr01:15629170..15629619
RNA-Seq ExpressionHG10011940
SyntenyHG10011940
Gene Ontology termsNA
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3436324.1 hypothetical protein FNV43_RR23416 [Rhamnella rubrinervis]1.4e-3255.63Show/hide
Query:  LCVVALIPKIEAQGWANPPPLLPPRPLCSSQFALASYACARLPVSPDPIPIPP-PPSE----GH--DHDHGHGHGHHHHHGRRHHHSQSPVAEECCRWAR
        L ++ L+PK E Q +   PP LPPRPLCSSQFALASYAC+++P SP P P PP PPS     GH  +H+H H HGH H HG RH H  SP  E CCRW +
Subjt:  LCVVALIPKIEAQGWANPPPLLPPRPLCSSQFALASYACARLPVSPDPIPIPP-PPSE----GH--DHDHGHGHGHHHHHGRRHHHSQSPVAEECCRWAR

Query:  QVDSECVCEALVHLANFLVRPSHAFTVAITDECVVTYSCNGR
        Q+DS+CVC+ LV L NFL RP+H ++V + D C V++ C GR
Subjt:  QVDSECVCEALVHLANFLVRPSHAFTVAITDECVVTYSCNGR

KAG6571480.1 hypothetical protein SDJN03_28208, partial [Cucurbita argyrosperma subsp. sororia]3.1e-4866.67Show/hide
Query:  MGR----FKIAALLFLCVVALIPKIEAQGWANPPPLLPPRPLCSSQFALASYACARLPVSPDPIPIPPPPS---EGHDHDHG----HGHGHH--HHHGRR
        MGR    + +AALLF+ +  +IP+I+AQ W+      PP+PLCSSQFALASYACARLP++P+P+PI PP S    GHDHDH     HGHGHH  HHHG  
Subjt:  MGR----FKIAALLFLCVVALIPKIEAQGWANPPPLLPPRPLCSSQFALASYACARLPVSPDPIPIPPPPS---EGHDHDHG----HGHGHH--HHHGRR

Query:  HHHSQSPVAEECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECVVTYSCNGRIKI
        HH S+SP+ EECCRWARQVDSECVC+AL HLANF+VRPSH FTVAIT++CVVTYSC GRIKI
Subjt:  HHHSQSPVAEECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECVVTYSCNGRIKI

XP_015891580.1 uncharacterized protein DDB_G0272724 [Ziziphus jujuba]1.4e-3255.4Show/hide
Query:  VVALIPKIEAQGWANPPPLLPPRPLCSSQFALASYACARLPVSPDPIPIPPPPSE----GHDHDHGHG--HGHHHHHGRRHHHSQSPVAEECCRWARQVD
        ++ L+PK+E+Q    PP  + PRPLC+SQFALASYAC+ +P +P P   P PPS     GH H HGHG  HGH H HG RH H +SP  E CCRW +Q+D
Subjt:  VVALIPKIEAQGWANPPPLLPPRPLCSSQFALASYACARLPVSPDPIPIPPPPSE----GHDHDHGHG--HGHHHHHGRRHHHSQSPVAEECCRWARQVD

Query:  SECVCEALVHLANFLVRPSHAFTVAITDECVVTYSCNGR
        S+CVC+ LVHL NFL RP+H ++V + D C VT+SC GR
Subjt:  SECVCEALVHLANFLVRPSHAFTVAITDECVVTYSCNGR

XP_022155619.1 uncharacterized protein LOC111022709 [Momordica charantia]2.7e-6075.47Show/hide
Query:  MGRFKIAALL-FLCVVALIPKIEAQGWANPPPLLPPRPLCSSQFALASYACARLPVSPDPIPIPPPPS----EGHDHDHGHGHGH-----HHHHGRRHHH
        MGRFKIA LL  LCV+ LIP++E Q W+ P PLLPPRPLCSSQFALASYACARLP++P+PIPI PPPS    +GH H HGHGHGH     H HH RR HH
Subjt:  MGRFKIAALL-FLCVVALIPKIEAQGWANPPPLLPPRPLCSSQFALASYACARLPVSPDPIPIPPPPS----EGHDHDHGHGHGH-----HHHHGRRHHH

Query:  SQSPVAEECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECVVTYSCNGRIKI
        + SPVAEECCRWAR+VDSECVC+AL+HLANFL+RPSHAFTVAITD+C+VTYSCNGRIKI
Subjt:  SQSPVAEECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECVVTYSCNGRIKI

XP_022967638.1 uncharacterized protein LOC111467082 [Cucurbita maxima]2.6e-4765.19Show/hide
Query:  MGRFKIA---ALLFLCVVALIPKIEAQGWANPPPLLPPRPLCSSQFALASYACARLPVSPDPIPIPPPPS----EGHDHDHGHGHGHH--HHHGRRHHHS
        MGR + A   A L   +  + PKIEAQ W+      PP+PLCSSQFALASYACARLP++ +P+PI PPPS    EGH H H HGHGHH  HHHG  HH +
Subjt:  MGRFKIA---ALLFLCVVALIPKIEAQGWANPPPLLPPRPLCSSQFALASYACARLPVSPDPIPIPPPPS----EGHDHDHGHGHGHH--HHHGRRHHHS

Query:  QSPVAEECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECVVTYSCNGRIKI
        +SP+ EECCRWARQVD+ECVC+AL HLANF+VRPSH FTVAIT++C+VTYSC GRIKI
Subjt:  QSPVAEECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECVVTYSCNGRIKI

TrEMBL top hitse value%identityAlignment
A0A251N5W9 Uncharacterized protein1.2e-3249.13Show/hide
Query:  MGRFKIAAL-LFLCVVALIPKIEAQGWANPPPLLPPRPLCSSQFALASYACARLPVSPDPIPIP--PPPS----------EGHDHDHGHGHGHHHHHGRR
        M R  I  L LF+  +  +PK+EAQ         PPRPLC+SQFALA+YACA LP +P P+P P  PPPS          + H+H+HGHGHGH H HG R
Subjt:  MGRFKIAAL-LFLCVVALIPKIEAQGWANPPPLLPPRPLCSSQFALASYACARLPVSPDPIPIP--PPPS----------EGHDHDHGHGHGHHHHHGRR

Query:  HHH-----------SQSPVAEECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECVVTYSCNGRIKI
        H H           S SP  + CCRW  Q+D+ECVCE LVHL  FL++P+HA+TVA+ + C VTY+C   I+I
Subjt:  HHH-----------SQSPVAEECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECVVTYSCNGRIKI

A0A5E4EE79 PREDICTED: histidine-rich1.2e-3249.13Show/hide
Query:  MGRFKIAAL-LFLCVVALIPKIEAQGWANPPPLLPPRPLCSSQFALASYACARLPVSPDPIPIP--PPPS----------EGHDHDHGHGHGHHHHHGRR
        M R  I  L LF+  +  +PK+EAQ         PPRPLC+SQFALA+YACA LP +P P+P P  PPPS          + H+H+HGHGHGH H HG R
Subjt:  MGRFKIAAL-LFLCVVALIPKIEAQGWANPPPLLPPRPLCSSQFALASYACARLPVSPDPIPIP--PPPS----------EGHDHDHGHGHGHHHHHGRR

Query:  HHH-----------SQSPVAEECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECVVTYSCNGRIKI
        H H           S SP  + CCRW  Q+D+ECVCE LVHL  FL++P+HA+TVA+ + C VTY+C   I+I
Subjt:  HHH-----------SQSPVAEECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECVVTYSCNGRIKI

A0A6J1DQT3 uncharacterized protein LOC1110227091.3e-6075.47Show/hide
Query:  MGRFKIAALL-FLCVVALIPKIEAQGWANPPPLLPPRPLCSSQFALASYACARLPVSPDPIPIPPPPS----EGHDHDHGHGHGH-----HHHHGRRHHH
        MGRFKIA LL  LCV+ LIP++E Q W+ P PLLPPRPLCSSQFALASYACARLP++P+PIPI PPPS    +GH H HGHGHGH     H HH RR HH
Subjt:  MGRFKIAALL-FLCVVALIPKIEAQGWANPPPLLPPRPLCSSQFALASYACARLPVSPDPIPIPPPPS----EGHDHDHGHGHGH-----HHHHGRRHHH

Query:  SQSPVAEECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECVVTYSCNGRIKI
        + SPVAEECCRWAR+VDSECVC+AL+HLANFL+RPSHAFTVAITD+C+VTYSCNGRIKI
Subjt:  SQSPVAEECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECVVTYSCNGRIKI

A0A6J1HVN1 uncharacterized protein LOC1114670821.3e-4765.19Show/hide
Query:  MGRFKIA---ALLFLCVVALIPKIEAQGWANPPPLLPPRPLCSSQFALASYACARLPVSPDPIPIPPPPS----EGHDHDHGHGHGHH--HHHGRRHHHS
        MGR + A   A L   +  + PKIEAQ W+      PP+PLCSSQFALASYACARLP++ +P+PI PPPS    EGH H H HGHGHH  HHHG  HH +
Subjt:  MGRFKIA---ALLFLCVVALIPKIEAQGWANPPPLLPPRPLCSSQFALASYACARLPVSPDPIPIPPPPS----EGHDHDHGHGHGHH--HHHGRRHHHS

Query:  QSPVAEECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECVVTYSCNGRIKI
        +SP+ EECCRWARQVD+ECVC+AL HLANF+VRPSH FTVAIT++C+VTYSC GRIKI
Subjt:  QSPVAEECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECVVTYSCNGRIKI

A0A6P4AZX7 uncharacterized protein DDB_G02727246.8e-3355.4Show/hide
Query:  VVALIPKIEAQGWANPPPLLPPRPLCSSQFALASYACARLPVSPDPIPIPPPPSE----GHDHDHGHG--HGHHHHHGRRHHHSQSPVAEECCRWARQVD
        ++ L+PK+E+Q    PP  + PRPLC+SQFALASYAC+ +P +P P   P PPS     GH H HGHG  HGH H HG RH H +SP  E CCRW +Q+D
Subjt:  VVALIPKIEAQGWANPPPLLPPRPLCSSQFALASYACARLPVSPDPIPIPPPPSE----GHDHDHGHG--HGHHHHHGRRHHHSQSPVAEECCRWARQVD

Query:  SECVCEALVHLANFLVRPSHAFTVAITDECVVTYSCNGR
        S+CVC+ LVHL NFL RP+H ++V + D C VT+SC GR
Subjt:  SECVCEALVHLANFLVRPSHAFTVAITDECVVTYSCNGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G63095.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.2e-1928.96Show/hide
Query:  PPRPLCSSQFALASYACARL---------PVSPDPIPIPPPPSE----GHDHDHGHGHGH----------------------------------------
        PPRPLC+SQ+ALA+YAC+RL         P++P P PI PPP E     HDHDH H H H                                        
Subjt:  PPRPLCSSQFALASYACARL---------PVSPDPIPIPPPPSE----GHDHDHGHGHGH----------------------------------------

Query:  ---------------------------------------------------HHHHGRRHHH---SQSPVAEECCRWARQVDSECVCEALVHLANFLVRPS
                                                           HH H  RHHH    ++   +ECC+W +Q+D+ECVC+ LV L   L +P 
Subjt:  ---------------------------------------------------HHHHGRRHHH---SQSPVAEECCRWARQVDSECVCEALVHLANFLVRPS

Query:  HAFTVAITDECVVTYSCNGRI
        H +TV + + C+VT+ C GR+
Subjt:  HAFTVAITDECVVTYSCNGRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGGTTCAAAATAGCAGCATTATTATTCTTGTGTGTTGTAGCTCTGATCCCCAAGATTGAAGCCCAAGGATGGGCTAACCCACCGCCGCTGTTGCCTCCACGCCC
ACTTTGTTCTTCACAATTTGCATTAGCAAGCTACGCATGTGCGAGGCTGCCTGTGAGCCCAGACCCCATCCCAATTCCTCCGCCTCCTTCAGAAGGCCACGACCACGACC
ACGGCCACGGCCACGGTCATCATCATCACCACGGGCGGCGCCACCACCACAGCCAGTCACCGGTGGCCGAGGAATGTTGCCGATGGGCCAGGCAGGTGGATAGTGAGTGC
GTGTGTGAGGCGTTAGTTCATTTGGCTAACTTCTTGGTGCGACCATCGCATGCGTTTACCGTGGCCATTACGGACGAATGCGTTGTCACTTACTCATGCAACGGACGAAT
CAAGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGGTTCAAAATAGCAGCATTATTATTCTTGTGTGTTGTAGCTCTGATCCCCAAGATTGAAGCCCAAGGATGGGCTAACCCACCGCCGCTGTTGCCTCCACGCCC
ACTTTGTTCTTCACAATTTGCATTAGCAAGCTACGCATGTGCGAGGCTGCCTGTGAGCCCAGACCCCATCCCAATTCCTCCGCCTCCTTCAGAAGGCCACGACCACGACC
ACGGCCACGGCCACGGTCATCATCATCACCACGGGCGGCGCCACCACCACAGCCAGTCACCGGTGGCCGAGGAATGTTGCCGATGGGCCAGGCAGGTGGATAGTGAGTGC
GTGTGTGAGGCGTTAGTTCATTTGGCTAACTTCTTGGTGCGACCATCGCATGCGTTTACCGTGGCCATTACGGACGAATGCGTTGTCACTTACTCATGCAACGGACGAAT
CAAGATTTGA
Protein sequenceShow/hide protein sequence
MGRFKIAALLFLCVVALIPKIEAQGWANPPPLLPPRPLCSSQFALASYACARLPVSPDPIPIPPPPSEGHDHDHGHGHGHHHHHGRRHHHSQSPVAEECCRWARQVDSEC
VCEALVHLANFLVRPSHAFTVAITDECVVTYSCNGRIKI