; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10011942 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011942
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPreprotein translocase subunit SCY2
Genome locationChr01:15637654..15642542
RNA-Seq ExpressionHG10011942
SyntenyHG10011942
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:0010027 - thylakoid membrane organization (biological process)
GO:0015031 - protein transport (biological process)
GO:0072598 - protein localization to chloroplast (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR002208 - SecY/SEC61-alpha family
IPR023201 - SecY domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140093.2 preprotein translocase subunit SCY2, chloroplastic [Cucumis sativus]7.1e-17597.2Show/hide
Query:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVLGLL
        MSLGFAILEAL+LSCYSLPYS+Y ANHRVKHVMVTSFLLVCGAMT+TWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSG AVVWWPYVL LL
Subjt:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVLGLL

Query:  GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVY
        GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSP+TEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVY
Subjt:  GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVY

Query:  YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL
        YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSS+LDHYLRS+NAGFAIGFTSVLIIVGSIIEL
Subjt:  YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL

Query:  RRSYQAYNVMPSLSNALRRYGV
        RRSYQAYNVMPSLSNALRRYGV
Subjt:  RRSYQAYNVMPSLSNALRRYGV

XP_008449450.1 PREDICTED: preprotein translocase subunit SCY2, chloroplastic [Cucumis melo]2.5e-17596.89Show/hide
Query:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVLGLL
        MSLGFAILEAL+LSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVL LL
Subjt:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVLGLL

Query:  GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVY
        GIFT+VTMWAVVVTEGCRKIKLQYYGFKLASAAREDSP+TEVEPYIPFNINPAGMQPILTTTYLLAFPS+LASLL STFWEHVKEILNPESSIGAEPWV+
Subjt:  GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVY

Query:  YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL
        YL+YAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTK+QASTRFWGGLLLSFLATTSSLLDHYLRS+NAGFAIGFTSVLIIVGSIIEL
Subjt:  YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL

Query:  RRSYQAYNVMPSLSNALRRYGV
        RRSYQAYNVMPSLSNALRRYGV
Subjt:  RRSYQAYNVMPSLSNALRRYGV

XP_023553756.1 preprotein translocase subunit SCY2, chloroplastic [Cucurbita pepo subsp. pepo]2.7e-17496.58Show/hide
Query:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVLGLL
        MSLGFAI+EAL+LSCYSLPYSIYAANHRVKHVMVT+FLLVCGAMTMTWICDTISESGFGQGSSLIIC+GIL+GYTETLYKMLSQLSGRAV+WWPYVL LL
Subjt:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVLGLL

Query:  GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVY
        GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSP+TEVEPYIPFNINPAGMQPILTTTYLLAFPSILAS+LNSTFW HVKEILNPESSIGAEPWVY
Subjt:  GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVY

Query:  YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL
        YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKA+IEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL
Subjt:  YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL

Query:  RRSYQAYNVMPSLSNALRRYGV
        RRSYQAYNVMPSLSNALRRYGV
Subjt:  RRSYQAYNVMPSLSNALRRYGV

XP_038888194.1 preprotein translocase subunit SCY2, chloroplastic isoform X1 [Benincasa hispida]1.1e-17598.45Show/hide
Query:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVLGLL
        MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSG AV WWPYV  LL
Subjt:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVLGLL

Query:  GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVY
        GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSP+TEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVY
Subjt:  GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVY

Query:  YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL
        YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL
Subjt:  YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL

Query:  RRSYQAYNVMPSLSNALRRYGV
        RRSYQAYNVMPSLSNALRRYGV
Subjt:  RRSYQAYNVMPSLSNALRRYGV

XP_038888196.1 preprotein translocase subunit SCY2, chloroplastic isoform X3 [Benincasa hispida]1.1e-17598.45Show/hide
Query:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVLGLL
        MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSG AV WWPYV  LL
Subjt:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVLGLL

Query:  GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVY
        GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSP+TEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVY
Subjt:  GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVY

Query:  YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL
        YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL
Subjt:  YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL

Query:  RRSYQAYNVMPSLSNALRRYGV
        RRSYQAYNVMPSLSNALRRYGV
Subjt:  RRSYQAYNVMPSLSNALRRYGV

TrEMBL top hitse value%identityAlignment
A0A1S3BM25 preprotein translocase subunit SCY2, chloroplastic1.2e-17596.89Show/hide
Query:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVLGLL
        MSLGFAILEAL+LSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVL LL
Subjt:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVLGLL

Query:  GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVY
        GIFT+VTMWAVVVTEGCRKIKLQYYGFKLASAAREDSP+TEVEPYIPFNINPAGMQPILTTTYLLAFPS+LASLL STFWEHVKEILNPESSIGAEPWV+
Subjt:  GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVY

Query:  YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL
        YL+YAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTK+QASTRFWGGLLLSFLATTSSLLDHYLRS+NAGFAIGFTSVLIIVGSIIEL
Subjt:  YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL

Query:  RRSYQAYNVMPSLSNALRRYGV
        RRSYQAYNVMPSLSNALRRYGV
Subjt:  RRSYQAYNVMPSLSNALRRYGV

A0A6J1DMV0 preprotein translocase subunit SCY2, chloroplastic isoform X16.8e-17195.96Show/hide
Query:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVLGLL
        MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTS LLVCGAMTMTWICDTISESGFG GSSLIICVGILTGYTETLYKMLSQLSGRAV+W PYVL LL
Subjt:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVLGLL

Query:  GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVY
        GIFT+VTMWAVVVTEGCRKIKLQYYGFKLASAAR+DSP+TEVEPYIPFNINPAGMQPILTTTYLLA PSILASLLNSTFWEHVKEILNPESSIGAEPWVY
Subjt:  GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVY

Query:  YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL
        Y IYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKA+IEYLTKIQASTRFWGGLLLS LATTSS+LDHYLRSINAGFAIGFTSVLIIVGSIIEL
Subjt:  YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL

Query:  RRSYQAYNVMPSLSNALRRYGV
        RRSYQAYNVMPSLSNALRRYGV
Subjt:  RRSYQAYNVMPSLSNALRRYGV

A0A6J1DPS1 preprotein translocase subunit SCY2, chloroplastic isoform X36.8e-17195.96Show/hide
Query:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVLGLL
        MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTS LLVCGAMTMTWICDTISESGFG GSSLIICVGILTGYTETLYKMLSQLSGRAV+W PYVL LL
Subjt:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVLGLL

Query:  GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVY
        GIFT+VTMWAVVVTEGCRKIKLQYYGFKLASAAR+DSP+TEVEPYIPFNINPAGMQPILTTTYLLA PSILASLLNSTFWEHVKEILNPESSIGAEPWVY
Subjt:  GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVY

Query:  YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL
        Y IYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKA+IEYLTKIQASTRFWGGLLLS LATTSS+LDHYLRSINAGFAIGFTSVLIIVGSIIEL
Subjt:  YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL

Query:  RRSYQAYNVMPSLSNALRRYGV
        RRSYQAYNVMPSLSNALRRYGV
Subjt:  RRSYQAYNVMPSLSNALRRYGV

A0A6J1HFX8 preprotein translocase subunit SCY2, chloroplastic1.1e-17395.96Show/hide
Query:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVLGLL
        MSLGFAI+EAL+LSCYSLPYS+YAA+HRVKHVMVT+FLLVCGAMTMTWICDTISESGFGQGSSLIICVGIL+GYTETLYKMLSQLSGR+V+WWPYVL LL
Subjt:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVLGLL

Query:  GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVY
        GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSP+TEVEPYIPFNINPAGMQPILTTTYLLAFPSILAS+LNSTFW HVKEILNPESSIGAEPWVY
Subjt:  GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVY

Query:  YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL
        YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKA+IEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL
Subjt:  YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL

Query:  RRSYQAYNVMPSLSNALRRYGV
        RRSYQAYNVMPSLSNALRRYGV
Subjt:  RRSYQAYNVMPSLSNALRRYGV

A0A6J1HWW7 preprotein translocase subunit SCY2, chloroplastic4.2e-17396.26Show/hide
Query:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVLGLL
        MSLGFAI+EAL+LSCYSLPYSIYAANHRVKHVMVT+FLLVCGAMTMTWICDTISESGFGQGSSLIICVGIL+GYTETLYKMLSQLSGR V+WWPYVL LL
Subjt:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVLGLL

Query:  GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVY
         IFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSP+TEVEPYIPFNINPAGMQPILTTTYLLAFPSILAS+LNSTFW HVKEILNPESSIGAEPWVY
Subjt:  GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVY

Query:  YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL
        YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKA+IEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL
Subjt:  YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL

Query:  RRSYQAYNVMPSLSNALRRYG
        RRSYQAYNVMPSLSNALRRYG
Subjt:  RRSYQAYNVMPSLSNALRRYG

SwissProt top hitse value%identityAlignment
F4IQV7 Preprotein translocase subunit SCY2, chloroplastic4.1e-14982.92Show/hide
Query:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVLGLL
        +S  FAI+EAL+++  SL YS++AA  +VKHVM+TS LLVCGAMTMTW+CDTISESGFG GSSLIICVGILTGYTETL+KML+Q+SG    W PY+LGLL
Subjt:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVLGLL

Query:  GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVY
        GIFTVVTM+AVVVTEGCRKIKLQYYGFKLASA+RE SP+TEVEPYIPFNINPAGMQP+LTTTYLLAFPSILAS+L S F  ++KEILNPES++GA PWVY
Subjt:  GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVY

Query:  YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL
        Y IYA FVFLFNIFDIANLPKEI+DYLNKMGARIPNIKPGKA+IEYLTKIQASTRFWGGLLLSFLAT S++LDHYLRSIN GF+IGFTSVLIIVGSIIEL
Subjt:  YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL

Query:  RRSYQAYNVMPSLSNALRRYGV
        RRSY AYNVMPSLS AL+RYGV
Subjt:  RRSYQAYNVMPSLSNALRRYGV

O66491 Protein translocase subunit SecY2.3e-2728.38Show/hide
Query:  NHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVLGLLGIFTVVTMWAVVVTEGCRKIKLQYY
        N  +  +++T   LV G M + WI D I+E G G G+SLII  GI+  +   + +   ++    +     +L ++ +   + +  V V E  R+I +QY 
Subjt:  NHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVLGLLGIFTVVTMWAVVVTEGCRKIKLQYY

Query:  GFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANL--PKEI
        G ++             + Y+P  INPAG+ PI+    LL  PS L + + + F + + ++  P +        Y  +Y  F+  F  F  A L  P E+
Subjt:  GFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANL--PKEI

Query:  SDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRR
        ++ L+K GA IP ++PG+ +++YL +I     F+G L LS +A    L+  +    N  F  G T+ LI+VG  ++  R  + Y +     + +RR
Subjt:  SDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRR

P0A4H0 Protein translocase subunit SecY7.5e-2629.71Show/hide
Query:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKM--LSQLSGRAVVWWPYVLG
        +SLG+A+L++++++ +    + YA        + T+  LV G+M + WI + I+E G G G+SL+I + I+     +L +   L+Q   R+ V    +L 
Subjt:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKM--LSQLSGRAVVWWPYVLG

Query:  LLGIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAARE--DSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAE
        ++ + T+V +  V V EG R+I        + SA R+  +   +E   Y+P  +N  G+ PI+  + +L  P    SL N T  E V  I N  S  G  
Subjt:  LLGIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAARE--DSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAE

Query:  PWVYYLIYAVFVFLFNIF--DIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIV
        PW+Y L Y V +  F+ F   +   P +++  L KMG+ IP ++PG+A+ +Y+  +       G + L  +A   + ++   R I      G TS+LI+V
Subjt:  PWVYYLIYAVFVFLFNIF--DIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIV

Query:  GSIIELRRSYQAY
        G  I+  +  Q Y
Subjt:  GSIIELRRSYQAY

P51297 Protein translocase subunit SecY5.7e-2628.12Show/hide
Query:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTG----YTETLYKMLSQLSGRAVVWWPYV
        ++LG+A L++  +S +  P   Y  N     V  +   L  G+M + W+ + I+E G G G+SL+I   I++G    +T++ +   +  S  ++ +  ++
Subjt:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTG----YTETLYKMLSQLSGRAVVWWPYV

Query:  LGLLGIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAE
        +    IF ++ +  + V EG R+IK+      +++     S + +   Y+P  +N  G+ PI+  +  +A P+ L  L  +TF   V  +  P  S+   
Subjt:  LGLLGIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAE

Query:  PWVYYLIYAVFVFLFNIF--DIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIV
           Y ++Y+V +  F+ F   I   P++I+  L KMGA IPNI+PG+A+I+YL  I     F G   L  +A    +++   +  N    +G TS+LI+V
Subjt:  PWVYYLIYAVFVFLFNIF--DIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIV

Query:  GSIIELRRSYQAY
        G  I+  +  Q Y
Subjt:  GSIIELRRSYQAY

P77964 Protein translocase subunit SecY3.4e-2630.19Show/hide
Query:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKML--SQLSGRAVVWWPYVLG
        ++ G+ I++ L L+   L    YA N+    +  T   +  G+M + WI + I+E G G G+SL+I V I+    +TL + +  +Q  GR  +    V+ 
Subjt:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKML--SQLSGRAVVWWPYVLG

Query:  LLGIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAARE--DSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNST-----FWEHVKEILNPES
        L+ +F V+ +  V V EG R+I        + SA R+       E   Y+P  +N  G+ PI+  + +L  PS LA           F E   +I N   
Subjt:  LLGIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAARE--DSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNST-----FWEHVKEILNPES

Query:  SIGAEPWVYYLIYAVFVFLFNIFDIANL--PKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTS
        ++    WVY ++Y+V +F F+ F  + +  P+++S  L KMG+ IP I+PGK + +YL  +     F G + LSF+AT    ++     +     +G TS
Subjt:  SIGAEPWVYYLIYAVFVFLFNIFDIANL--PKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTS

Query:  VLIIVGSIIELRRSYQAY
        +LI+VG  I+  +  Q Y
Subjt:  VLIIVGSIIELRRSYQAY

Arabidopsis top hitse value%identityAlignment
AT2G18710.1 SECY homolog 11.1e-1926.88Show/hide
Query:  SLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILT------GYTETLYKMLSQLSGRAVVWWPY
        S+GFAI++A+    Y  P   Y  +   + V+ +  LL  G++  T+I + IS+   G G+SL+I   I++      G T          +G   +   +
Subjt:  SLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILT------GYTETLYKMLSQLSGRAVVWWPY

Query:  VLGLLGIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGA
        +L +LGI        V V E  RKI L Y     AS     +   +   Y+PF +N AG+ PI+ +T  LA P+ LA     +  ++V   L P  S   
Subjt:  VLGLLGIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGA

Query:  EPWVYYLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVG
           +  + +  + + F   D    P ++S+ L + GA IP ++PGK++  ++  +       G   L+ LA   ++++  +  + A      TSVLI+VG
Subjt:  EPWVYYLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVG

Query:  SIIELRRSYQAYNVMPSLSN
           +  R  QA  +     N
Subjt:  SIIELRRSYQAYNVMPSLSN

AT2G31530.1 SecY protein transport family protein2.9e-15082.92Show/hide
Query:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVLGLL
        +S  FAI+EAL+++  SL YS++AA  +VKHVM+TS LLVCGAMTMTW+CDTISESGFG GSSLIICVGILTGYTETL+KML+Q+SG    W PY+LGLL
Subjt:  MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVLGLL

Query:  GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVY
        GIFTVVTM+AVVVTEGCRKIKLQYYGFKLASA+RE SP+TEVEPYIPFNINPAGMQP+LTTTYLLAFPSILAS+L S F  ++KEILNPES++GA PWVY
Subjt:  GIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVY

Query:  YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL
        Y IYA FVFLFNIFDIANLPKEI+DYLNKMGARIPNIKPGKA+IEYLTKIQASTRFWGGLLLSFLAT S++LDHYLRSIN GF+IGFTSVLIIVGSIIEL
Subjt:  YLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL

Query:  RRSYQAYNVMPSLSNALRRYGV
        RRSY AYNVMPSLS AL+RYGV
Subjt:  RRSYQAYNVMPSLSNALRRYGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACTTGGCTTTGCAATATTGGAGGCTTTAATACTATCTTGTTACTCACTTCCATACTCTATCTATGCAGCTAATCACAGAGTTAAGCATGTGATGGTAACT
TCTTTCTTATTGGTTTGTGGTGCTATGACAATGACATGGATTTGTGATACAATCTCAGAGTCTGGATTTGGGCAAGGTTCTTCTCTAATTATATGTGTTGGAATA
CTGACGGGCTATACAGAGACATTGTACAAAATGTTGTCTCAGCTGTCAGGACGTGCTGTGGTTTGGTGGCCTTACGTACTTGGCTTATTGGGCATCTTTACCGTA
GTTACAATGTGGGCCGTTGTTGTTACTGAAGGTTGCAGGAAAATTAAGCTGCAGTATTATGGTTTTAAACTTGCTTCAGCTGCAAGAGAAGACTCACCAATGACT
GAAGTAGAGCCTTATATACCTTTTAATATCAACCCTGCTGGGATGCAACCAATTCTCACGACCACCTATCTCTTGGCGTTTCCCAGTATCCTTGCCAGCCTCCTA
AATTCAACATTCTGGGAGCATGTAAAGGAGATACTGAACCCTGAAAGTTCTATTGGTGCAGAGCCTTGGGTTTATTACTTGATATATGCGGTTTTTGTATTCTTG
TTCAATATATTTGACATTGCCAACTTGCCAAAAGAGATTTCAGACTATTTAAATAAGATGGGAGCAAGGATACCAAACATTAAACCTGGGAAAGCTTCTATAGAG
TACCTGACAAAAATTCAAGCATCAACACGCTTTTGGGGAGGGCTATTGTTGAGTTTTTTGGCAACAACATCATCTCTTCTTGATCATTACTTGCGCAGTATTAAT
GCTGGTTTTGCAATTGGTTTTACATCAGTTCTGATCATTGTAGGTTCCATTATTGAACTCAGAAGATCTTACCAAGCATATAACGTGATGCCAAGTTTAAGCAAT
GCTTTGAGGCGTTATGGTGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCACTTGGCTTTGCAATATTGGAGGCTTTAATACTATCTTGTTACTCACTTCCATACTCTATCTATGCAGCTAATCACAGAGTTAAGCATGTGATGGTAACT
TCTTTCTTATTGGTTTGTGGTGCTATGACAATGACATGGATTTGTGATACAATCTCAGAGTCTGGATTTGGGCAAGGTTCTTCTCTAATTATATGTGTTGGAATA
CTGACGGGCTATACAGAGACATTGTACAAAATGTTGTCTCAGCTGTCAGGACGTGCTGTGGTTTGGTGGCCTTACGTACTTGGCTTATTGGGCATCTTTACCGTA
GTTACAATGTGGGCCGTTGTTGTTACTGAAGGTTGCAGGAAAATTAAGCTGCAGTATTATGGTTTTAAACTTGCTTCAGCTGCAAGAGAAGACTCACCAATGACT
GAAGTAGAGCCTTATATACCTTTTAATATCAACCCTGCTGGGATGCAACCAATTCTCACGACCACCTATCTCTTGGCGTTTCCCAGTATCCTTGCCAGCCTCCTA
AATTCAACATTCTGGGAGCATGTAAAGGAGATACTGAACCCTGAAAGTTCTATTGGTGCAGAGCCTTGGGTTTATTACTTGATATATGCGGTTTTTGTATTCTTG
TTCAATATATTTGACATTGCCAACTTGCCAAAAGAGATTTCAGACTATTTAAATAAGATGGGAGCAAGGATACCAAACATTAAACCTGGGAAAGCTTCTATAGAG
TACCTGACAAAAATTCAAGCATCAACACGCTTTTGGGGAGGGCTATTGTTGAGTTTTTTGGCAACAACATCATCTCTTCTTGATCATTACTTGCGCAGTATTAAT
GCTGGTTTTGCAATTGGTTTTACATCAGTTCTGATCATTGTAGGTTCCATTATTGAACTCAGAAGATCTTACCAAGCATATAACGTGATGCCAAGTTTAAGCAAT
GCTTTGAGGCGTTATGGTGTATGA
Protein sequenceShow/hide protein sequence
MSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVLGLLGIFTV
VTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPMTEVEPYIPFNINPAGMQPILTTTYLLAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVYYLIYAVFVFL
FNIFDIANLPKEISDYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIELRRSYQAYNVMPSLSN
ALRRYGV