CuGenDBv2

Gene ID	HG10011956
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Spindle pole body-associated protein
Genome location	Chr01:15757876..15758379
RNA-Seq Expression	HG10011956
Synteny	HG10011956
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0057316.1 uncharacterized protein E6C27_scaffold280G001610 [Cucumis melo var. makuwa]

6.8e-36

86.17

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Query:  MGAVSLLLPTSLRCYHFPSSTRTLLSNFAASSQLLSFAHKSTKFRTKTVVFGNQSGNENDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW
        MGA+SLLL TSL  YHFPSST+TLLSNFAASSQLLSF  K TKFRTKT+VFG QS  +NDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW
Subjt:  MGAVSLLLPTSLRCYHFPSSTRTLLSNFAASSQLLSFAHKSTKFRTKTVVFGNQSGNENDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW

XP_004140096.1 uncharacterized protein LOC101202761 [Cucumis sativus]

3.7e-34

81.91

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Query:  MGAVSLLLPTSLRCYHFPSSTRTLLSNFAASSQLLSFAHKSTKFRTKTVVFGNQSGNENDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW
        MGAVS  L +SLR Y FPSST+TLLSNFAASSQLLSF    TKFR+KT+VFG QSGN+NDSQFLDENGVV+DMDGYLNYHSFEYDSVWDTKP+W
Subjt:  MGAVSLLLPTSLRCYHFPSSTRTLLSNFAASSQLLSFAHKSTKFRTKTVVFGNQSGNENDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW

XP_008449434.1 PREDICTED: uncharacterized protein LOC103491324 isoform X1 [Cucumis melo]

6.8e-36

86.17

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Query:  MGAVSLLLPTSLRCYHFPSSTRTLLSNFAASSQLLSFAHKSTKFRTKTVVFGNQSGNENDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW
        MGA+SLLL TSL  YHFPSST+TLLSNFAASSQLLSF  K TKFRTKT+VFG QS  +NDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW
Subjt:  MGAVSLLLPTSLRCYHFPSSTRTLLSNFAASSQLLSFAHKSTKFRTKTVVFGNQSGNENDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW

XP_016900713.1 PREDICTED: uncharacterized protein LOC103491324 isoform X2 [Cucumis melo]

6.8e-36

86.17

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Query:  MGAVSLLLPTSLRCYHFPSSTRTLLSNFAASSQLLSFAHKSTKFRTKTVVFGNQSGNENDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW
        MGA+SLLL TSL  YHFPSST+TLLSNFAASSQLLSF  K TKFRTKT+VFG QS  +NDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW
Subjt:  MGAVSLLLPTSLRCYHFPSSTRTLLSNFAASSQLLSFAHKSTKFRTKTVVFGNQSGNENDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW

XP_038887717.1 uncharacterized protein LOC120077773 [Benincasa hispida]

5.2e-36

86.02

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Query:  GAVSLLLPTSLRCYHFPSSTRTLLSNFAASSQLLSFAHKSTKFRTKTVVFGNQSGNENDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW
        GA+SL LPTSLR +H PSST+TLLSNF ASSQLLSF   STKFRTKTVVF NQSG ENDSQFLDENGVV+DMDGYLNYHSFEYDSVWDTKPSW
Subjt:  GAVSLLLPTSLRCYHFPSSTRTLLSNFAASSQLLSFAHKSTKFRTKTVVFGNQSGNENDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KED9 Uncharacterized protein

1.8e-34

81.91

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Query:  MGAVSLLLPTSLRCYHFPSSTRTLLSNFAASSQLLSFAHKSTKFRTKTVVFGNQSGNENDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW
        MGAVS  L +SLR Y FPSST+TLLSNFAASSQLLSF    TKFR+KT+VFG QSGN+NDSQFLDENGVV+DMDGYLNYHSFEYDSVWDTKP+W
Subjt:  MGAVSLLLPTSLRCYHFPSSTRTLLSNFAASSQLLSFAHKSTKFRTKTVVFGNQSGNENDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW

A0A1S3BLE6 uncharacterized protein LOC103491324 isoform X1

3.3e-36

86.17

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Query:  MGAVSLLLPTSLRCYHFPSSTRTLLSNFAASSQLLSFAHKSTKFRTKTVVFGNQSGNENDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW
        MGA+SLLL TSL  YHFPSST+TLLSNFAASSQLLSF  K TKFRTKT+VFG QS  +NDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW
Subjt:  MGAVSLLLPTSLRCYHFPSSTRTLLSNFAASSQLLSFAHKSTKFRTKTVVFGNQSGNENDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW

A0A1S4DXK9 uncharacterized protein LOC103491324 isoform X2

3.3e-36

86.17

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Query:  MGAVSLLLPTSLRCYHFPSSTRTLLSNFAASSQLLSFAHKSTKFRTKTVVFGNQSGNENDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW
        MGA+SLLL TSL  YHFPSST+TLLSNFAASSQLLSF  K TKFRTKT+VFG QS  +NDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW
Subjt:  MGAVSLLLPTSLRCYHFPSSTRTLLSNFAASSQLLSFAHKSTKFRTKTVVFGNQSGNENDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW

A0A5D3CTE0 Uncharacterized protein

3.3e-36

86.17

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Query:  MGAVSLLLPTSLRCYHFPSSTRTLLSNFAASSQLLSFAHKSTKFRTKTVVFGNQSGNENDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW
        MGA+SLLL TSL  YHFPSST+TLLSNFAASSQLLSF  K TKFRTKT+VFG QS  +NDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW
Subjt:  MGAVSLLLPTSLRCYHFPSSTRTLLSNFAASSQLLSFAHKSTKFRTKTVVFGNQSGNENDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW

A0A6J1HWP2 uncharacterized protein LOC111466970

1.1e-31

77.66

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Query:  MGAVSLLLPTSLRCYHFPSSTRTLLSNFAASSQLLSFAHKSTKFRTKTVVFGNQSGNENDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW
        MG VSL L TSLR +HFP ST+TLLSNFAASSQ++SF  K T+FR K+VVFG QS NE++SQFLDENG V+DMDGYLNYHSFEYDSVWDTKPSW
Subjt:  MGAVSLLLPTSLRCYHFPSSTRTLLSNFAASSQLLSFAHKSTKFRTKTVVFGNQSGNENDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G02725.1 unknown protein

1.3e-13

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Query:  FPSSTRTLLSNFAASSQLLSFAHKSTKFRTKTVVFGNQSGNENDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW
        F   T  LLS  +  + L SF  K  +  TK   FG       DS+F+DE GVVDDM+G+L+  S EYDSVWDTKPSW
Subjt:  FPSSTRTLLSNFAASSQLLSFAHKSTKFRTKTVVFGNQSGNENDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW

AT4G02725.2 unknown protein

1.3e-13

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Query:  FPSSTRTLLSNFAASSQLLSFAHKSTKFRTKTVVFGNQSGNENDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW
        F   T  LLS  +  + L SF  K  +  TK   FG       DS+F+DE GVVDDM+G+L+  S EYDSVWDTKPSW
Subjt:  FPSSTRTLLSNFAASSQLLSFAHKSTKFRTKTVVFGNQSGNENDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSW

Sequences

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CDS sequence

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ATGGGAGCTGTTTCTCTATTACTTCCAACTTCTCTACGATGCTACCATTTTCCTTCTTCAACACGAACCCTTCTTTCTAATTTCGCTGCTTCCTCACAACTCCTTTCCTT
TGCTCACAAATCCACCAAATTCCGCACCAAAACTGTGGTTTTTGGGAACCAATCAGGCAACGAAAATGATTCTCAGTTTCTAGATGAAAATGGGGTCGTCGATGATATGG
ATGGATATTTGAATTACCATTCTTTCGAATATGACTCCGTCTGGGATACAAAGCCTTCTTGGTTAGCTTTCCATTTTGGGGCTTTCTTCTTCCACCATTTTTACTCTCGC
TTTCTTATCTTATTTTTCAGCAACTATGTAAATGAGGTTTTTAGAAAAAACCCCAATATTGGGATTTTGGAATTAGTGCTAACAAATCAAGGAATCGTGAATTTCTATCA
TGGGTTCTTCATATATTTGGTTGGTAATGGTTATACAGAGAGAATTCTGTTTTCTCCAATGTAA

mRNA sequence

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Protein sequence

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MGAVSLLLPTSLRCYHFPSSTRTLLSNFAASSQLLSFAHKSTKFRTKTVVFGNQSGNENDSQFLDENGVVDDMDGYLNYHSFEYDSVWDTKPSWLAFHFGAFFFHHFYSR
FLILFFSNYVNEVFRKNPNIGILELVLTNQGIVNFYHGFFIYLVGNGYTERILFSPM

HG10011956 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome