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HG10011997 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011997
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionBromo domain-containing protein
Genome locationChr01:16383672..16390531
RNA-Seq ExpressionHG10011997
SyntenyHG10011997
Gene Ontology termsNA
InterPro domainsIPR004252 - Probable transposase, Ptta/En/Spm, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049895.1 uncharacterized protein E6C27_scaffold13G00470 [Cucumis melo var. makuwa]7.4e-1764.63Show/hide
Query:  NLNSTYTRQKSELKSYASQVIDGTLEMNEDEIFVRVFGSEKHGRVRGYGVGVTPSELFGSSSNIRDLERRLNESEQRLQESE
        ++N     +  ELK  ASQVI+G L+MNED+IFV+VFG EKHG VRGYGVGVTP ELF SSS + DLE  LNE E RL ESE
Subjt:  NLNSTYTRQKSELKSYASQVIDGTLEMNEDEIFVRVFGSEKHGRVRGYGVGVTPSELFGSSSNIRDLERRLNESEQRLQESE

KAA0056079.1 bromodomain-containing factor 1-like isoform X2 [Cucumis melo var. makuwa]9.6e-1773.44Show/hide
Query:  LKSYASQVIDGTLEMNEDEIFVRVFGSEKHGRVRGYGVGVTPSELFGSSSNIRDLERRLNESEQ
        +KSYASQVIDGTL+MN+D+IFV++ G EKH  VRGYGVGV  SELFGSSS + DLERRLNES++
Subjt:  LKSYASQVIDGTLEMNEDEIFVRVFGSEKHGRVRGYGVGVTPSELFGSSSNIRDLERRLNESEQ

XP_008457059.1 PREDICTED: uncharacterized protein LOC103496828 [Cucumis melo]1.1e-1775Show/hide
Query:  LKSYASQVIDGTLEMNEDEIFVRVFGSEKHGRVRGYGVGVTPSELFGSSSNIRDLERRLNESEQ
        +KSYASQVIDGTL+MN+D+IFV++FG EKH  VRGYGVGV  SELFGSSS + DLERRLNES++
Subjt:  LKSYASQVIDGTLEMNEDEIFVRVFGSEKHGRVRGYGVGVTPSELFGSSSNIRDLERRLNESEQ

XP_023893229.1 uncharacterized protein LOC112005206 [Quercus suber]5.8e-1443.81Show/hide
Query:  LKSYASQVIDGTLEMNEDEIFVRVFGSEKHGRVRGYGVGVTPSELFGSSSNI-RDLERRLNESEQRLQESEQRRKVEVETLKHQISELENRFEDRFKKKM
        L+   +QV +G L M++D++F  VFG E+HGRVRGYG G+TP++L GSSS+I  DLE+RL ESEQ+  E++     +VE+LK ++ +L++  E +  + +
Subjt:  LKSYASQVIDGTLEMNEDEIFVRVFGSEKHGRVRGYGVGVTPSELFGSSSNI-RDLERRLNESEQRLQESEQRRKVEVETLKHQISELENRFEDRFKKKM

Query:  AEMRK
         + R+
Subjt:  AEMRK

XP_038904040.1 uncharacterized protein LOC120090445 [Benincasa hispida]1.5e-3875.59Show/hide
Query:  LNSTYTRQKSELKSYASQVIDGTLEMNEDEIFVRVFGSEKHGRVRGYGVGVTPSELFGSSSNIRDLERRLNESEQRLQESEQRRK-------VEVETLKH
        +N T   + S+LKSYASQVIDGTL+MNEDE FVRVFG EKHG V GYGVGVTPSELFGSSS IRD ERRLNESEQRLQE EQ+RK       +EVE LK 
Subjt:  LNSTYTRQKSELKSYASQVIDGTLEMNEDEIFVRVFGSEKHGRVRGYGVGVTPSELFGSSSNIRDLERRLNESEQRLQESEQRRK-------VEVETLKH

Query:  QISELENRFEDRFKKKMAEMRKEFVSS
        QISELENRFEDRF+K MAEM K+FVSS
Subjt:  QISELENRFEDRFKKKMAEMRKEFVSS

TrEMBL top hitse value%identityAlignment
A0A1S3C480 uncharacterized protein LOC1034968285.5e-1875Show/hide
Query:  LKSYASQVIDGTLEMNEDEIFVRVFGSEKHGRVRGYGVGVTPSELFGSSSNIRDLERRLNESEQ
        +KSYASQVIDGTL+MN+D+IFV++FG EKH  VRGYGVGV  SELFGSSS + DLERRLNES++
Subjt:  LKSYASQVIDGTLEMNEDEIFVRVFGSEKHGRVRGYGVGVTPSELFGSSSNIRDLERRLNESEQ

A0A2N9GUC6 Uncharacterized protein1.5e-1551.58Show/hide
Query:  LKSYASQVIDGTLEMNEDEIFVRVFGSEKHGRVRGYGVGVTPSELFGSSSN-IRDLERRLNESEQRLQESEQRRKVEVETLKHQISELENRFEDR
        L+S  +QV +G+L+M+ED++FV VFG E+HGRVRGYG GVT ++L+GSSS+ I DLE+RL ESEQ   E+  +   +VE L+ Q+ +L++  E+R
Subjt:  LKSYASQVIDGTLEMNEDEIFVRVFGSEKHGRVRGYGVGVTPSELFGSSSN-IRDLERRLNESEQRLQESEQRRKVEVETLKHQISELENRFEDR

A0A2N9HCP8 Uncharacterized protein1.5e-1551.58Show/hide
Query:  LKSYASQVIDGTLEMNEDEIFVRVFGSEKHGRVRGYGVGVTPSELFGSSSN-IRDLERRLNESEQRLQESEQRRKVEVETLKHQISELENRFEDR
        L+S  +QV +G+L+M+ED++FV VFG E+HGRVRGYG GVT ++L+GSSS+ I DLE+RL ESEQ   E+  +   +VE L+ Q+ +L++  E+R
Subjt:  LKSYASQVIDGTLEMNEDEIFVRVFGSEKHGRVRGYGVGVTPSELFGSSSN-IRDLERRLNESEQRLQESEQRRKVEVETLKHQISELENRFEDR

A0A5A7U8E9 Uncharacterized protein3.6e-1764.63Show/hide
Query:  NLNSTYTRQKSELKSYASQVIDGTLEMNEDEIFVRVFGSEKHGRVRGYGVGVTPSELFGSSSNIRDLERRLNESEQRLQESE
        ++N     +  ELK  ASQVI+G L+MNED+IFV+VFG EKHG VRGYGVGVTP ELF SSS + DLE  LNE E RL ESE
Subjt:  NLNSTYTRQKSELKSYASQVIDGTLEMNEDEIFVRVFGSEKHGRVRGYGVGVTPSELFGSSSNIRDLERRLNESEQRLQESE

A0A5D3BP34 Bromodomain-containing factor 1-like isoform X24.7e-1773.44Show/hide
Query:  LKSYASQVIDGTLEMNEDEIFVRVFGSEKHGRVRGYGVGVTPSELFGSSSNIRDLERRLNESEQ
        +KSYASQVIDGTL+MN+D+IFV++ G EKH  VRGYGVGV  SELFGSSS + DLERRLNES++
Subjt:  LKSYASQVIDGTLEMNEDEIFVRVFGSEKHGRVRGYGVGVTPSELFGSSSNIRDLERRLNESEQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCTTCTCCTAAGTGTAAGAACTACTCACAATAATCTTAACTCCACATATACTAGACAGAAGTCAGAGCTTAAATCATATGCTTCTCAAGTGATCGATGGTACACT
TGAAATGAACGAGGATGAGATTTTTGTACGAGTATTTGGATCGGAGAAACACGGACGTGTTCGTGGTTATGGAGTAGGTGTTACTCCTTCTGAGTTGTTTGGATCATCGT
CTAACATACGCGATCTTGAGCGTCGCCTTAATGAGTCTGAACAACGTCTTCAAGAATCTGAACAACGAAGAAAAGTTGAGGTAGAAACACTTAAGCATCAAATAAGCGAA
TTAGAAAATCGTTTTGAAGATAGATTTAAAAAAAAGATGGCAGAAATGCGTAAAGAATTTGTTTCTAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCTTCTCCTAAGTGTAAGAACTACTCACAATAATCTTAACTCCACATATACTAGACAGAAGTCAGAGCTTAAATCATATGCTTCTCAAGTGATCGATGGTACACT
TGAAATGAACGAGGATGAGATTTTTGTACGAGTATTTGGATCGGAGAAACACGGACGTGTTCGTGGTTATGGAGTAGGTGTTACTCCTTCTGAGTTGTTTGGATCATCGT
CTAACATACGCGATCTTGAGCGTCGCCTTAATGAGTCTGAACAACGTCTTCAAGAATCTGAACAACGAAGAAAAGTTGAGGTAGAAACACTTAAGCATCAAATAAGCGAA
TTAGAAAATCGTTTTGAAGATAGATTTAAAAAAAAGATGGCAGAAATGCGTAAAGAATTTGTTTCTAGTTGA
Protein sequenceShow/hide protein sequence
MSLLLSVRTTHNNLNSTYTRQKSELKSYASQVIDGTLEMNEDEIFVRVFGSEKHGRVRGYGVGVTPSELFGSSSNIRDLERRLNESEQRLQESEQRRKVEVETLKHQISE
LENRFEDRFKKKMAEMRKEFVSS