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HG10012008 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10012008
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr01:16497230..16497484
RNA-Seq ExpressionHG10012008
SyntenyHG10012008
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025373.1 hypothetical protein E6C27_scaffold1204G00600 [Cucumis melo var. makuwa]9.7e-1553.57Show/hide
Query:  MKIQFSFFFAILLLLINTHRLEGGRIMKEENQKWSRVVFLQSLERVPVPPSGKNDHTNIPAPVESRAFARKFTVKPAQAYPNHV
        MKIQF+FFFAIL+LL N H L+  R MK++ +KWS ++  QSL+R PVPPS ++  TNIP P+  +AFA K TV PA   P+++
Subjt:  MKIQFSFFFAILLLLINTHRLEGGRIMKEENQKWSRVVFLQSLERVPVPPSGKNDHTNIPAPVESRAFARKFTVKPAQAYPNHV
KAG6571501.1 hypothetical protein SDJN03_28229, partial [Cucurbita argyrosperma subsp. sororia]1.3e-1452.38Show/hide
Query:  MKIQFSFFFAILLLLINTHRLEGGRIMKEENQKWSRVVFLQSLERVPVPPSGKNDHTNIPAPVESRAFARKFTVKPAQAYPNHV
        MKIQF+F  AIL++L N H+L+  R MKE+ QKWS ++  QSL+RVPVPPS +N  T IP  +  RAF  K T  PA +Y + V
Subjt:  MKIQFSFFFAILLLLINTHRLEGGRIMKEENQKWSRVVFLQSLERVPVPPSGKNDHTNIPAPVESRAFARKFTVKPAQAYPNHV
KAG6571503.1 hypothetical protein SDJN03_28231, partial [Cucurbita argyrosperma subsp. sororia]2.6e-1552.38Show/hide
Query:  MKIQFSFFFAILLLLINTHRLEGGRIMKEENQKWSRVVFLQSLERVPVPPSGKNDHTNIPAPVESRAFARKFTVKPAQAYPNHV
        MKIQF+F  AIL++L N H+L+  R MKE+ QKWS ++  QSL+R PVPPS KN  T IP P+  R+F  K T  PA +Y + V
Subjt:  MKIQFSFFFAILLLLINTHRLEGGRIMKEENQKWSRVVFLQSLERVPVPPSGKNDHTNIPAPVESRAFARKFTVKPAQAYPNHV
KAG6571504.1 hypothetical protein SDJN03_28232, partial [Cucurbita argyrosperma subsp. sororia]4.3e-1552.38Show/hide
Query:  MKIQFSFFFAILLLLINTHRLEGGRIMKEENQKWSRVVFLQSLERVPVPPSGKNDHTNIPAPVESRAFARKFTVKPAQAYPNHV
        MKIQF+F  AIL++L N H+L+  R MKE+ QKWS ++  QSL+R PVPP+ KN  T IP P+  RAF  K T  PA +Y + V
Subjt:  MKIQFSFFFAILLLLINTHRLEGGRIMKEENQKWSRVVFLQSLERVPVPPSGKNDHTNIPAPVESRAFARKFTVKPAQAYPNHV
KAG6571506.1 hypothetical protein SDJN03_28234, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1758.33Show/hide
Query:  MKIQFSFFFAILLLLINTHRLEGGRIMKEENQKWSRVVFLQSLERVPVPPSGKNDHTNIPAPVESRAFARKFTVKPAQAYPNHV
        MKIQF+F  AI L+L N H+L+  RIMK + QKWS +V  QSL+R PVPPSGK+  T IP P+  RAFA KF   PA AYP+H+
Subjt:  MKIQFSFFFAILLLLINTHRLEGGRIMKEENQKWSRVVFLQSLERVPVPPSGKNDHTNIPAPVESRAFARKFTVKPAQAYPNHV
TrEMBL top hitse value%identityAlignment
A0A0A0LCY5 Uncharacterized protein5.2e-1457.32Show/hide
Query:  MKIQFSFFFAILLLLINTHRLEGGRIMKEENQKWSRVVFL--QSLERVPVPPSGKNDHTNIPAPVESRAFARKFTVKPAQAY
        MKIQFSF  AIL+LL NTH L+  R +K++ Q WS  + L  QSL+RVPVPPS KN  TNIP PV  RAFA K +   A+ Y
Subjt:  MKIQFSFFFAILLLLINTHRLEGGRIMKEENQKWSRVVFL--QSLERVPVPPSGKNDHTNIPAPVESRAFARKFTVKPAQAY
A0A5D3B777 Uncharacterized protein4.7e-1553.57Show/hide
Query:  MKIQFSFFFAILLLLINTHRLEGGRIMKEENQKWSRVVFLQSLERVPVPPSGKNDHTNIPAPVESRAFARKFTVKPAQAYPNHV
        MKIQF+FFFAIL+LL N H L+  R MK++ +KWS ++  QSL+R PVPPS ++  TNIP P+  +AFA K TV PA   P+++
Subjt:  MKIQFSFFFAILLLLINTHRLEGGRIMKEENQKWSRVVFLQSLERVPVPPSGKNDHTNIPAPVESRAFARKFTVKPAQAYPNHV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATCCAATTTTCTTTCTTTTTTGCCATTTTGCTTCTTCTTATCAATACTCATAGGCTTGAAGGTGGCAGAATAATGAAAGAAGAGAACCAAAAGTGGTCAAGGGT
GGTGTTTCTCCAGTCATTGGAGAGGGTACCGGTTCCTCCCTCTGGAAAAAATGATCACACCAATATTCCGGCTCCCGTCGAGTCTAGGGCTTTTGCCCGAAAATTTACGG
TGAAACCAGCACAAGCATACCCAAATCATGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATCCAATTTTCTTTCTTTTTTGCCATTTTGCTTCTTCTTATCAATACTCATAGGCTTGAAGGTGGCAGAATAATGAAAGAAGAGAACCAAAAGTGGTCAAGGGT
GGTGTTTCTCCAGTCATTGGAGAGGGTACCGGTTCCTCCCTCTGGAAAAAATGATCACACCAATATTCCGGCTCCCGTCGAGTCTAGGGCTTTTGCCCGAAAATTTACGG
TGAAACCAGCACAAGCATACCCAAATCATGTTTAA
Protein sequenceShow/hide protein sequence
MKIQFSFFFAILLLLINTHRLEGGRIMKEENQKWSRVVFLQSLERVPVPPSGKNDHTNIPAPVESRAFARKFTVKPAQAYPNHV