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HG10012009 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10012009
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr01:16503346..16503597
RNA-Seq ExpressionHG10012009
SyntenyHG10012009
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571501.1 hypothetical protein SDJN03_28229, partial [Cucurbita argyrosperma subsp. sororia]2.7e-2577.11Show/hide
Query:  MKIQFAFFLAILLLLANIHQLQSCRTMKEDRQKWSTSELLLRQSLQRAPVPPSAKNGGTNIPVPVGQRAFAGKSTAAPAHSYN
        MKIQFAF LAIL++LAN HQLQSCRTMKEDRQKWS   LLL+QSL+R PVPPSA+NGGT IP  +GQRAF GKST +PAHSY+
Subjt:  MKIQFAFFLAILLLLANIHQLQSCRTMKEDRQKWSTSELLLRQSLQRAPVPPSAKNGGTNIPVPVGQRAFAGKSTAAPAHSYN
KAG6571502.1 hypothetical protein SDJN03_28230, partial [Cucurbita argyrosperma subsp. sororia]3.9e-2474.7Show/hide
Query:  MKIQFAFFLAILLLLANIHQLQSCRTMKEDRQKWSTSELLLRQSLQRAPVPPSAKNGGTNIPVPVGQRAFAGKSTAAPAHSYN
        MKIQFAF LAIL++LAN HQLQSCRTMKED QKWS    +L++SLQ APVPP+AKNGGT IP P GQRAF GKST +PAHSY+
Subjt:  MKIQFAFFLAILLLLANIHQLQSCRTMKEDRQKWSTSELLLRQSLQRAPVPPSAKNGGTNIPVPVGQRAFAGKSTAAPAHSYN
KAG6571503.1 hypothetical protein SDJN03_28231, partial [Cucurbita argyrosperma subsp. sororia]9.9e-2881.93Show/hide
Query:  MKIQFAFFLAILLLLANIHQLQSCRTMKEDRQKWSTSELLLRQSLQRAPVPPSAKNGGTNIPVPVGQRAFAGKSTAAPAHSYN
        MKIQFAF LAIL++LAN HQLQSCRTMKEDRQKWS   LLL+QSLQRAPVPPSAKNGGT IPVP+GQR+F GKST +PAHSY+
Subjt:  MKIQFAFFLAILLLLANIHQLQSCRTMKEDRQKWSTSELLLRQSLQRAPVPPSAKNGGTNIPVPVGQRAFAGKSTAAPAHSYN
KAG6571504.1 hypothetical protein SDJN03_28232, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2679.52Show/hide
Query:  MKIQFAFFLAILLLLANIHQLQSCRTMKEDRQKWSTSELLLRQSLQRAPVPPSAKNGGTNIPVPVGQRAFAGKSTAAPAHSYN
        MKIQFAF LAIL++LAN HQLQSCRTMKED QKWS   LLL+QSLQRAPVPP+AKNGGT IP P+GQRAF GKST +PAHSY+
Subjt:  MKIQFAFFLAILLLLANIHQLQSCRTMKEDRQKWSTSELLLRQSLQRAPVPPSAKNGGTNIPVPVGQRAFAGKSTAAPAHSYN
KAG6571505.1 hypothetical protein SDJN03_28233, partial [Cucurbita argyrosperma subsp. sororia]1.7e-2780.72Show/hide
Query:  MKIQFAFFLAILLLLANIHQLQSCRTMKEDRQKWSTSELLLRQSLQRAPVPPSAKNGGTNIPVPVGQRAFAGKSTAAPAHSYN
        MKIQFAF LAI++LLAN HQLQSCRTMK+DRQKWS   +LL+QSLQRAPVPPSAKNGGT IPVP+GQRAF GKST +PAHSY+
Subjt:  MKIQFAFFLAILLLLANIHQLQSCRTMKEDRQKWSTSELLLRQSLQRAPVPPSAKNGGTNIPVPVGQRAFAGKSTAAPAHSYN
TrEMBL top hitse value%identityAlignment
A0A0A0LCY5 Uncharacterized protein2.5e-2473.49Show/hide
Query:  MKIQFAFFLAILLLLANIHQLQSCRTMKEDRQKWSTSELLLRQSLQRAPVPPSAKNGGTNIPVPVGQRAFAGKSTAAPAHSYN
        MKIQF+F LAIL+LLAN H LQSCRT+K+D+Q WS    LL+QSLQR PVPPSAKNG TNIPVPVGQRAFAGK++AA A +Y+
Subjt:  MKIQFAFFLAILLLLANIHQLQSCRTMKEDRQKWSTSELLLRQSLQRAPVPPSAKNGGTNIPVPVGQRAFAGKSTAAPAHSYN
A0A5D3B777 Uncharacterized protein3.9e-2272.15Show/hide
Query:  MKIQFAFFLAILLLLANIHQLQSCRTMKEDRQKWSTSELLLRQSLQRAPVPPSAKNGGTNIPVPVGQRAFAGKSTAAPA
        MKIQF FF AIL+LLAN H LQSCRTMK+D++KWS   +L++QSLQRAPVPPS ++G TNIPVP+GQ+AFAGKST  PA
Subjt:  MKIQFAFFLAILLLLANIHQLQSCRTMKEDRQKWSTSELLLRQSLQRAPVPPSAKNGGTNIPVPVGQRAFAGKSTAAPA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATCCAATTTGCTTTCTTTTTAGCCATTTTGCTTCTTCTTGCCAACATTCATCAGCTCCAAAGTTGCAGAACCATGAAAGAGGATAGACAAAAGTGGTCAACGTC
GGAGCTACTTCTTCGGCAGTCGCTGCAGAGGGCGCCGGTCCCTCCCTCGGCCAAAAATGGCGGCACCAATATCCCAGTACCGGTCGGGCAAAGGGCATTTGCCGGAAAAT
CCACGGCGGCGCCGGCACACAGCTACAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATCCAATTTGCTTTCTTTTTAGCCATTTTGCTTCTTCTTGCCAACATTCATCAGCTCCAAAGTTGCAGAACCATGAAAGAGGATAGACAAAAGTGGTCAACGTC
GGAGCTACTTCTTCGGCAGTCGCTGCAGAGGGCGCCGGTCCCTCCCTCGGCCAAAAATGGCGGCACCAATATCCCAGTACCGGTCGGGCAAAGGGCATTTGCCGGAAAAT
CCACGGCGGCGCCGGCACACAGCTACAATTGA
Protein sequenceShow/hide protein sequence
MKIQFAFFLAILLLLANIHQLQSCRTMKEDRQKWSTSELLLRQSLQRAPVPPSAKNGGTNIPVPVGQRAFAGKSTAAPAHSYN