CuGenDBv2

Gene ID	HG10012041
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Protein kinase domain-containing protein
Genome location	Chr01:16860369..16860674
RNA-Seq Expression	HG10012041
Synteny	HG10012041
Gene Ontology terms	GO:0006468 - protein phosphorylation (biological process) GO:0005886 - plasma membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0004672 - protein kinase activity (molecular function) GO:0005524 - ATP binding (molecular function)
InterPro domains	IPR013210 - Leucine-rich repeat-containing N-terminal, plant-type

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8650966.1 hypothetical protein Csa_002046 [Cucumis sativus]

1.1e-07

68.29

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Query:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLGVKRNHISN
        +LGLIVFK G QD +GKLV WN++DETPCNW GVK N  +N
Subjt:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLGVKRNHISN

KAG7027857.1 putative LRR receptor-like serine/threonine-protein kinase IRK, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.1e-07

63.41

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Query:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLGVKRNHISN
        +LGLIVFK G QD +GKL+ WN+ED+TPCNW G+K N  +N
Subjt:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLGVKRNHISN

XP_004137674.1 probable LRR receptor-like serine/threonine-protein kinase IRK [Cucumis sativus]

1.1e-07

68.29

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Query:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLGVKRNHISN
        +LGLIVFK G QD +GKLV WN++DETPCNW GVK N  +N
Subjt:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLGVKRNHISN

XP_022941623.1 probable LRR receptor-like serine/threonine-protein kinase IRK [Cucurbita moschata]

1.1e-07

63.41

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Query:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLGVKRNHISN
        +LGLIVFK G QD +GKL+ WN+ED+TPCNW G+K N  +N
Subjt:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLGVKRNHISN

XP_023539050.1 probable LRR receptor-like serine/threonine-protein kinase IRK [Cucurbita pepo subsp. pepo]

1.1e-07

63.41

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Query:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLGVKRNHISN
        +LGLIVFK G QD +GKL+ WN+ED+TPCNW G+K N  +N
Subjt:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLGVKRNHISN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LF35 Protein kinase domain-containing protein

5.1e-08

68.29

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Query:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLGVKRNHISN
        +LGLIVFK G QD +GKLV WN++DETPCNW GVK N  +N
Subjt:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLGVKRNHISN

A0A5A7TRM1 Putative LRR receptor-like serine/threonine-protein kinase IRK

5.1e-08

68.29

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Query:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLGVKRNHISN
        +LGLIVFK G QD +GKLV WN++DETPCNW GVK N  +N
Subjt:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLGVKRNHISN

A0A5D3DMN8 Putative LRR receptor-like serine/threonine-protein kinase IRK

5.1e-08

68.29

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Query:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLGVKRNHISN
        +LGLIVFK G QD +GKLV WN++DETPCNW GVK N  +N
Subjt:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLGVKRNHISN

A0A6J1FSM0 probable LRR receptor-like serine/threonine-protein kinase IRK

5.1e-08

63.41

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Query:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLGVKRNHISN
        +LGLIVFK G QD +GKL+ WN+ED+TPCNW G+K N  +N
Subjt:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLGVKRNHISN

A0A6J1I668 probable LRR receptor-like serine/threonine-protein kinase IRK

5.1e-08

63.41

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Query:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLGVKRNHISN
        +LGLIVFK G QD +GKL+ WN+ED+TPCNW G+K N  +N
Subjt:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLGVKRNHISN

SwissProt top hits

e value

%identity

Alignment

O49318 Probable leucine-rich repeat receptor-like protein kinase At2g33170

1.9e-04

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Query:  GFQDSIGKLVKWNKEDETPCNWLGV
        GFQDS+ +L  WN  DETPCNW+GV
Subjt:  GFQDSIGKLVKWNKEDETPCNWLGV

Q9LY03 Probable LRR receptor-like serine/threonine-protein kinase IRK

3.0e-05

57.14

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Query:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLGVK
        +LGLIVFK   +D   KL  WN++D TPC+W GVK
Subjt:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLGVK

Q9LZV7 Leucine-rich repeat receptor-like protein kinase PXC2

4.6e-06

60.61

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Query:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLG
        +LGLIVFK G  D + KL  WN ED  PCNW+G
Subjt:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLG

Arabidopsis top hits

e value

%identity

Alignment

AT2G33170.1 Leucine-rich repeat receptor-like protein kinase family protein

1.4e-05

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Query:  GFQDSIGKLVKWNKEDETPCNWLGV
        GFQDS+ +L  WN  DETPCNW+GV
Subjt:  GFQDSIGKLVKWNKEDETPCNWLGV

AT3G28040.1 Leucine-rich receptor-like protein kinase family protein

1.2e-04

48.65

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Query:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLGVKRN
        +LGLIVFK    D    L  W ++D TPC+W  VK N
Subjt:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLGVKRN

AT3G56370.1 Leucine-rich repeat protein kinase family protein

2.1e-06

57.14

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Query:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLGVK
        +LGLIVFK   +D   KL  WN++D TPC+W GVK
Subjt:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLGVK

AT5G01890.1 Leucine-rich receptor-like protein kinase family protein

3.3e-07

60.61

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Query:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLG
        +LGLIVFK G  D + KL  WN ED  PCNW+G
Subjt:  ILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLG

Sequences

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CDS sequence

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ATGATTTTGGGATTAATAGTGTTTAAAGTTGGCTTTCAAGATTCTATAGGCAAACTGGTCAAATGGAATAAAGAAGATGAAACTCCCTGCAACTGGCTTGGTGTCAAACG
CAATCATATTTCCAATTCACATCGTCCTGAAGTTGCAATTCCTTCGTGTACTTACTTGCCAACAACAACTTCACCGGTACAATCAACTTTGCTCTTTCTCACCTTAGAGG
AAGTCCATCGTTGTGGACATCCAAAAGTTTCTAAGGACCCCCGTCGCATGGTCGTCGGCTTCCCTTGCATACACGCGTTCTATTGA

mRNA sequence

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Protein sequence

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MILGLIVFKVGFQDSIGKLVKWNKEDETPCNWLGVKRNHISNSHRPEVAIPSCTYLPTTTSPVQSTLLFLTLEEVHRCGHPKVSKDPRRMVVGFPCIHAFY

HG10012041 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome