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HG10012088 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10012088
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr01:17383679..17384035
RNA-Seq ExpressionHG10012088
SyntenyHG10012088
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTTTGACTTTTCTATGAGTGATCGGGTTATTATTTATGTTGATGCAGCTTGTAAGATTAATCATCCTGTAGTTGGCTTTGGTACAATTATTGGTACCCTCTCGAG
GTCCATTGTGGCTTCTATTCACGGGTTTAGAGTCTCCTCTTTAAGACTTTTGTGCGCTGAGGCTTATGTCATTTATGAGAGCCTTCGTTTAGCTGAAAGACTGGAGCTTT
CCCGTTTGTTGGTGTTATCTGATTCATTATCTGCGATTCAAATGATCAATGGTCTTGAGGAAGCTGAGGTGGACGTTGCAAACACTGTGATGGATATCCAGAAGATTTGT
GGGGCTTTTCCTTCAATTACCTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTTTTGACTTTTCTATGAGTGATCGGGTTATTATTTATGTTGATGCAGCTTGTAAGATTAATCATCCTGTAGTTGGCTTTGGTACAATTATTGGTACCCTCTCGAG
GTCCATTGTGGCTTCTATTCACGGGTTTAGAGTCTCCTCTTTAAGACTTTTGTGCGCTGAGGCTTATGTCATTTATGAGAGCCTTCGTTTAGCTGAAAGACTGGAGCTTT
CCCGTTTGTTGGTGTTATCTGATTCATTATCTGCGATTCAAATGATCAATGGTCTTGAGGAAGCTGAGGTGGACGTTGCAAACACTGTGATGGATATCCAGAAGATTTGT
GGGGCTTTTCCTTCAATTACCTTTTAG
Protein sequenceShow/hide protein sequence
MTFDFSMSDRVIIYVDAACKINHPVVGFGTIIGTLSRSIVASIHGFRVSSLRLLCAEAYVIYESLRLAERLELSRLLVLSDSLSAIQMINGLEEAEVDVANTVMDIQKIC
GAFPSITF