CuGenDBv2

Gene ID	HG10012121
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein XRI1-like
Genome location	Chr01:17872583..17874849
RNA-Seq Expression	HG10012121
Synteny	HG10012121
Gene Ontology terms	GO:0006281 - DNA repair (biological process) GO:0007140 - male meiotic nuclear division (biological process) GO:0007143 - female meiotic nuclear division (biological process) GO:0009555 - pollen development (biological process) GO:0010165 - response to X-ray (biological process) GO:0005634 - nucleus (cellular component)
InterPro domains	IPR039933 - Protein XRI1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025348.1 protein XRI1 isoform X1 [Cucumis melo var. makuwa]

2.7e-155

90.58

Show/hide

Query:  SDTWNWDGDGYTIQKDTDIEISECLWDGTVSENGDLSYVFDETTPVKACGDLAYHVTSSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSS
        SD WNW+GDGYTIQKDTDIEISECLWDG VSENGDLSYVFDETTPVKACGDLAYHVT SDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSS
Subjt:  SDTWNWDGDGYTIQKDTDIEISECLWDGTVSENGDLSYVFDETTPVKACGDLAYHVTSSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSS

Query:  RFLKSHNKDVSHPAVLPEVSYGIPEY-----NVLISCHENLDHSPEGWIAECLNDADMHCSPEDLNFAGTSDIQIDVSEDDIILFELVEFCDGAPEFKPN
        RFLKSHNKDVS  A L EVSYGIPE      NVLISCHENLDHSPEGWIAECLNDADMHCSPEDL FAGTSDIQIDVS          EFCDGAPEFK N
Subjt:  RFLKSHNKDVSHPAVLPEVSYGIPEY-----NVLISCHENLDHSPEGWIAECLNDADMHCSPEDLNFAGTSDIQIDVSEDDIILFELVEFCDGAPEFKPN

Query:  AVQHHPSRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS
         V HHP+RAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS
Subjt:  AVQHHPSRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS

Query:  ITIMRTRG
        ITIMRTRG
Subjt:  ITIMRTRG

XP_004144384.1 protein XRI1 [Cucumis sativus]

9.3e-156

90.26

Show/hide

Query:  SDTWNWDGDGYTIQKDTDIEISECLWDGTVSENGDLSYVFDETTPVKACGDLAYHVTSSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSS
        +DTWNW+GDGYTIQKDTDIEISECLWDG VSENGDLSYVFDETTPVKACGDLAYHVT SDDRNKKSEESRETHSQAKRRRMLQFTAQDLETS+CREDLSS
Subjt:  SDTWNWDGDGYTIQKDTDIEISECLWDGTVSENGDLSYVFDETTPVKACGDLAYHVTSSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSS

Query:  RFLKSHNKDVSHPAVLPEVSYGIPEY-----NVLISCHENLDHSPEGWIAECLNDADMHCSPEDLNFAGTSDIQIDVSEDDIILFELVEFCDGAPEFKPN
        RFLKSHNK VS PA L EVSYGIPE      NVLISCHENLDHSPEGWIAECLNDADMHCSPEDL+FAGTSDIQIDVS          EFCDGAPEFK N
Subjt:  RFLKSHNKDVSHPAVLPEVSYGIPEY-----NVLISCHENLDHSPEGWIAECLNDADMHCSPEDLNFAGTSDIQIDVSEDDIILFELVEFCDGAPEFKPN

Query:  AVQHHPSRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS
         VQHHP+RAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPS+SYPTSAFSGKPVVGKTKIHTEGGKGS
Subjt:  AVQHHPSRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS

Query:  ITIMRTRG
        ITIMRTRG
Subjt:  ITIMRTRG

XP_008461885.1 PREDICTED: protein XRI1 isoform X1 [Cucumis melo]

2.7e-155

90.58

Show/hide

Query:  SDTWNWDGDGYTIQKDTDIEISECLWDGTVSENGDLSYVFDETTPVKACGDLAYHVTSSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSS
        SD WNW+GDGYTIQKDTDIEISECLWDG VSENGDLSYVFDETTPVKACGDLAYHVT SDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSS
Subjt:  SDTWNWDGDGYTIQKDTDIEISECLWDGTVSENGDLSYVFDETTPVKACGDLAYHVTSSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSS

Query:  RFLKSHNKDVSHPAVLPEVSYGIPEY-----NVLISCHENLDHSPEGWIAECLNDADMHCSPEDLNFAGTSDIQIDVSEDDIILFELVEFCDGAPEFKPN
        RFLKSHNKDVS  A L EVSYGIPE      NVLISCHENLDHSPEGWIAECLNDADMHCSPEDL FAGTSDIQIDVS          EFCDGAPEFK N
Subjt:  RFLKSHNKDVSHPAVLPEVSYGIPEY-----NVLISCHENLDHSPEGWIAECLNDADMHCSPEDLNFAGTSDIQIDVSEDDIILFELVEFCDGAPEFKPN

Query:  AVQHHPSRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS
         V HHP+RAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS
Subjt:  AVQHHPSRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS

Query:  ITIMRTRG
        ITIMRTRG
Subjt:  ITIMRTRG

XP_008461886.1 PREDICTED: protein XRI1 isoform X2 [Cucumis melo]

6.0e-155

90.26

Show/hide

Query:  SDTWNWDGDGYTIQKDTDIEISECLWDGTVSENGDLSYVFDETTPVKACGDLAYHVTSSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSS
        +D WNW+GDGYTIQKDTDIEISECLWDG VSENGDLSYVFDETTPVKACGDLAYHVT SDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSS
Subjt:  SDTWNWDGDGYTIQKDTDIEISECLWDGTVSENGDLSYVFDETTPVKACGDLAYHVTSSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSS

Query:  RFLKSHNKDVSHPAVLPEVSYGIPEY-----NVLISCHENLDHSPEGWIAECLNDADMHCSPEDLNFAGTSDIQIDVSEDDIILFELVEFCDGAPEFKPN
        RFLKSHNKDVS  A L EVSYGIPE      NVLISCHENLDHSPEGWIAECLNDADMHCSPEDL FAGTSDIQIDVS          EFCDGAPEFK N
Subjt:  RFLKSHNKDVSHPAVLPEVSYGIPEY-----NVLISCHENLDHSPEGWIAECLNDADMHCSPEDLNFAGTSDIQIDVSEDDIILFELVEFCDGAPEFKPN

Query:  AVQHHPSRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS
         V HHP+RAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS
Subjt:  AVQHHPSRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS

Query:  ITIMRTRG
        ITIMRTRG
Subjt:  ITIMRTRG

XP_038887270.1 protein XRI1 [Benincasa hispida]

1.5e-153

89.25

Show/hide

Query:  DTWNWDGDGYTIQKDTDIEISECLWDGTVSENGDLSYVFDETTPVKACGDLAYHVTSSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSSR
        D+WNW+GDGYTIQKDTDIEISECLWDG VSENGDLSYVFDETTPVKACGDLAYHVT  DDRN+KSEESRET SQAKRRRMLQFTAQDLE S CREDLSSR
Subjt:  DTWNWDGDGYTIQKDTDIEISECLWDGTVSENGDLSYVFDETTPVKACGDLAYHVTSSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSSR

Query:  FLKSHNKDVSHPAVLPEVSYGIPEY-----NVLISCHENLDHSPEGWIAECLNDADMHCSPEDLNFAGTSDIQIDVSEDDIILFELVEFCDGAPEFKPNA
        FLKSH+KDVS PA L EVSYGIPE      NVLISCHENLDHSP+GWIAECLNDADMHCSPEDLNF GTSDIQIDVS          EFCDGAPEFK NA
Subjt:  FLKSHNKDVSHPAVLPEVSYGIPEY-----NVLISCHENLDHSPEGWIAECLNDADMHCSPEDLNFAGTSDIQIDVSEDDIILFELVEFCDGAPEFKPNA

Query:  VQHHPSRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSI
        VQHHP+RAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSI
Subjt:  VQHHPSRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSI

Query:  TIMRTRG
        TIMRTRG
Subjt:  TIMRTRG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LBN6 Uncharacterized protein

4.5e-156

90.26

Show/hide

Query:  SDTWNWDGDGYTIQKDTDIEISECLWDGTVSENGDLSYVFDETTPVKACGDLAYHVTSSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSS
        +DTWNW+GDGYTIQKDTDIEISECLWDG VSENGDLSYVFDETTPVKACGDLAYHVT SDDRNKKSEESRETHSQAKRRRMLQFTAQDLETS+CREDLSS
Subjt:  SDTWNWDGDGYTIQKDTDIEISECLWDGTVSENGDLSYVFDETTPVKACGDLAYHVTSSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSS

Query:  RFLKSHNKDVSHPAVLPEVSYGIPEY-----NVLISCHENLDHSPEGWIAECLNDADMHCSPEDLNFAGTSDIQIDVSEDDIILFELVEFCDGAPEFKPN
        RFLKSHNK VS PA L EVSYGIPE      NVLISCHENLDHSPEGWIAECLNDADMHCSPEDL+FAGTSDIQIDVS          EFCDGAPEFK N
Subjt:  RFLKSHNKDVSHPAVLPEVSYGIPEY-----NVLISCHENLDHSPEGWIAECLNDADMHCSPEDLNFAGTSDIQIDVSEDDIILFELVEFCDGAPEFKPN

Query:  AVQHHPSRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS
         VQHHP+RAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPS+SYPTSAFSGKPVVGKTKIHTEGGKGS
Subjt:  AVQHHPSRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS

Query:  ITIMRTRG
        ITIMRTRG
Subjt:  ITIMRTRG

A0A1S3CFL6 protein XRI1 isoform X2

2.9e-155

90.26

Show/hide

Query:  SDTWNWDGDGYTIQKDTDIEISECLWDGTVSENGDLSYVFDETTPVKACGDLAYHVTSSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSS
        +D WNW+GDGYTIQKDTDIEISECLWDG VSENGDLSYVFDETTPVKACGDLAYHVT SDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSS
Subjt:  SDTWNWDGDGYTIQKDTDIEISECLWDGTVSENGDLSYVFDETTPVKACGDLAYHVTSSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSS

Query:  RFLKSHNKDVSHPAVLPEVSYGIPEY-----NVLISCHENLDHSPEGWIAECLNDADMHCSPEDLNFAGTSDIQIDVSEDDIILFELVEFCDGAPEFKPN
        RFLKSHNKDVS  A L EVSYGIPE      NVLISCHENLDHSPEGWIAECLNDADMHCSPEDL FAGTSDIQIDVS          EFCDGAPEFK N
Subjt:  RFLKSHNKDVSHPAVLPEVSYGIPEY-----NVLISCHENLDHSPEGWIAECLNDADMHCSPEDLNFAGTSDIQIDVSEDDIILFELVEFCDGAPEFKPN

Query:  AVQHHPSRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS
         V HHP+RAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS
Subjt:  AVQHHPSRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS

Query:  ITIMRTRG
        ITIMRTRG
Subjt:  ITIMRTRG

A0A1S3CH27 protein XRI1 isoform X1

1.3e-155

90.58

Show/hide

Query:  SDTWNWDGDGYTIQKDTDIEISECLWDGTVSENGDLSYVFDETTPVKACGDLAYHVTSSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSS
        SD WNW+GDGYTIQKDTDIEISECLWDG VSENGDLSYVFDETTPVKACGDLAYHVT SDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSS
Subjt:  SDTWNWDGDGYTIQKDTDIEISECLWDGTVSENGDLSYVFDETTPVKACGDLAYHVTSSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSS

Query:  RFLKSHNKDVSHPAVLPEVSYGIPEY-----NVLISCHENLDHSPEGWIAECLNDADMHCSPEDLNFAGTSDIQIDVSEDDIILFELVEFCDGAPEFKPN
        RFLKSHNKDVS  A L EVSYGIPE      NVLISCHENLDHSPEGWIAECLNDADMHCSPEDL FAGTSDIQIDVS          EFCDGAPEFK N
Subjt:  RFLKSHNKDVSHPAVLPEVSYGIPEY-----NVLISCHENLDHSPEGWIAECLNDADMHCSPEDLNFAGTSDIQIDVSEDDIILFELVEFCDGAPEFKPN

Query:  AVQHHPSRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS
         V HHP+RAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS
Subjt:  AVQHHPSRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS

Query:  ITIMRTRG
        ITIMRTRG
Subjt:  ITIMRTRG

A0A5A7SGS7 Protein XRI1 isoform X1

1.3e-155

90.58

Show/hide

Query:  SDTWNWDGDGYTIQKDTDIEISECLWDGTVSENGDLSYVFDETTPVKACGDLAYHVTSSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSS
        SD WNW+GDGYTIQKDTDIEISECLWDG VSENGDLSYVFDETTPVKACGDLAYHVT SDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSS
Subjt:  SDTWNWDGDGYTIQKDTDIEISECLWDGTVSENGDLSYVFDETTPVKACGDLAYHVTSSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSS

Query:  RFLKSHNKDVSHPAVLPEVSYGIPEY-----NVLISCHENLDHSPEGWIAECLNDADMHCSPEDLNFAGTSDIQIDVSEDDIILFELVEFCDGAPEFKPN
        RFLKSHNKDVS  A L EVSYGIPE      NVLISCHENLDHSPEGWIAECLNDADMHCSPEDL FAGTSDIQIDVS          EFCDGAPEFK N
Subjt:  RFLKSHNKDVSHPAVLPEVSYGIPEY-----NVLISCHENLDHSPEGWIAECLNDADMHCSPEDLNFAGTSDIQIDVSEDDIILFELVEFCDGAPEFKPN

Query:  AVQHHPSRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS
         V HHP+RAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS
Subjt:  AVQHHPSRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS

Query:  ITIMRTRG
        ITIMRTRG
Subjt:  ITIMRTRG

A0A6J1EY26 protein XRI1-like

7.9e-145

85.39

Show/hide

Query:  SDTWNWDGDGYTIQKDTDIEISECLWDGTVSENGDLSYVFDETTPVKACGDLAYHVTSSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSS
        +D+WNWDGDGYTIQKDTD+   ECLWDG VSEN DLSYVFDETTPVKACGDLAYHVT +DDRNKKSEESRETHSQAKRRRMLQFTAQD+ETSLC EDLSS
Subjt:  SDTWNWDGDGYTIQKDTDIEISECLWDGTVSENGDLSYVFDETTPVKACGDLAYHVTSSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSS

Query:  RFLKSHNKDVSHPAVLPEVSYGIPE-----YNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLNFAGTSDIQIDVSEDDIILFELVEFCDGAPEFKPN
        RFLKSHNKDVS PA +P+V Y IPE      NV  SC ENLDHSPEGWIA+CLNDADMHCSPEDLNFAGTSD QIDVS          EFC+ APEFK N
Subjt:  RFLKSHNKDVSHPAVLPEVSYGIPE-----YNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLNFAGTSDIQIDVSEDDIILFELVEFCDGAPEFKPN

Query:  AVQHHPSRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS
        AVQHHP+R P NIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS
Subjt:  AVQHHPSRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS

Query:  ITIMRTRG
        ITIMRTRG
Subjt:  ITIMRTRG

SwissProt top hits

e value

%identity

Alignment

Q6NLW5 Protein XRI1

1.1e-66

50.16

Show/hide

Query:  SDTWNWDGDGYTIQKDTDI-EISECLWDGTVSENGDLSYVF-DETTPVKACGDLAYHVTSSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDL
        S +WNW  D Y  Q  +   ++ +C          D SY+F DE TPVKAC +L YHVT ++D N+K E   ET S  KRRRMLQF  Q  ETSL   + 
Subjt:  SDTWNWDGDGYTIQKDTDI-EISECLWDGTVSENGDLSYVF-DETTPVKACGDLAYHVTSSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDL

Query:  SSRFLKSHNKDVSHPAVLPEVSYGIPEY--NVLISCHENLDHSPEGWIAECLNDADMHCSPEDLNFAGTSDIQIDVSEDDIILFELVEFCDGAPEFKPNA
         S  LKS  +D +   +LPE S  I  +  +   S  E LD   E W A+CLNDA+    P+DLNF G+ D+Q+D+S          E+ +  PE +   
Subjt:  SSRFLKSHNKDVSHPAVLPEVSYGIPEY--NVLISCHENLDHSPEGWIAECLNDADMHCSPEDLNFAGTSDIQIDVSEDDIILFELVEFCDGAPEFKPNA

Query:  VQHHPSRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSI
        VQ   +R+ PN+IFKGRKS+ R  +KL SS+ YPFAFIKPCG HG +TLKDINQ+IR  PP+K K   E+P+    TSAFSGKPVVGKTKI TEGGKGSI
Subjt:  VQHHPSRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSI

Query:  TIMRTRG
        TIMRTRG
Subjt:  TIMRTRG

Arabidopsis top hits

e value

%identity

Alignment

AT5G48720.1 x-ray induced transcript 1

1.2e-63

53.68

Show/hide

Query:  DLSYVF-DETTPVKACGDLAYHVTSSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSSRFLKSHNKDVSHPAVLPEVSYGIPEY--NVLIS
        D SY+F DE TPVKAC +L YHVT ++D N+K E   ET S  KRRRMLQF  Q  ETSL   +  S  LKS  +D +   +LPE S  I  +  +   S
Subjt:  DLSYVF-DETTPVKACGDLAYHVTSSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSSRFLKSHNKDVSHPAVLPEVSYGIPEY--NVLIS

Query:  CHENLDHSPEGWIAECLNDADMHCSPEDLNFAGTSDIQIDVSEDDIILFELVEFCDGAPEFKPNAVQHHPSRAPPNIIFKGRKSYIRTPTKLASSVAYPF
          E LD   E W A+CLNDA+    P+DLNF G+ D+Q+D+S          E+ +  PE +   VQ   +R+ PN+IFKGRKS+ R  +KL SS+ YPF
Subjt:  CHENLDHSPEGWIAECLNDADMHCSPEDLNFAGTSDIQIDVSEDDIILFELVEFCDGAPEFKPNAVQHHPSRAPPNIIFKGRKSYIRTPTKLASSVAYPF

Query:  AFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG
        AFIKPCG HG +TLKDINQ+IR  PP+K K   E+P+    TSAFSGKPVVGKTKI TEGGKGSITIMRTRG
Subjt:  AFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG

AT5G48720.2 x-ray induced transcript 1

7.8e-68

50.16

Show/hide

Query:  SDTWNWDGDGYTIQKDTDI-EISECLWDGTVSENGDLSYVF-DETTPVKACGDLAYHVTSSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDL
        S +WNW  D Y  Q  +   ++ +C          D SY+F DE TPVKAC +L YHVT ++D N+K E   ET S  KRRRMLQF  Q  ETSL   + 
Subjt:  SDTWNWDGDGYTIQKDTDI-EISECLWDGTVSENGDLSYVF-DETTPVKACGDLAYHVTSSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDL

Query:  SSRFLKSHNKDVSHPAVLPEVSYGIPEY--NVLISCHENLDHSPEGWIAECLNDADMHCSPEDLNFAGTSDIQIDVSEDDIILFELVEFCDGAPEFKPNA
         S  LKS  +D +   +LPE S  I  +  +   S  E LD   E W A+CLNDA+    P+DLNF G+ D+Q+D+S          E+ +  PE +   
Subjt:  SSRFLKSHNKDVSHPAVLPEVSYGIPEY--NVLISCHENLDHSPEGWIAECLNDADMHCSPEDLNFAGTSDIQIDVSEDDIILFELVEFCDGAPEFKPNA

Query:  VQHHPSRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSI
        VQ   +R+ PN+IFKGRKS+ R  +KL SS+ YPFAFIKPCG HG +TLKDINQ+IR  PP+K K   E+P+    TSAFSGKPVVGKTKI TEGGKGSI
Subjt:  VQHHPSRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSI

Query:  TIMRTRG
        TIMRTRG
Subjt:  TIMRTRG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTATAATTTTATTAGTGATACTTGGAATTGGGATGGAGATGGGTATACCATTCAGAAGGATACTGATATAGAGATATCAGAATGCCTGTGGGATGGTACAGTCTCTGA
AAATGGCGATCTTTCGTATGTGTTTGATGAAACAACTCCTGTTAAAGCTTGTGGGGACTTGGCATATCATGTTACGAGTAGTGATGATAGGAATAAGAAATCAGAAGAAT
CCAGAGAAACTCATTCACAAGCGAAGAGACGGCGGATGTTGCAGTTTACTGCACAAGATTTGGAAACTTCCCTCTGCCGTGAAGATTTGTCTTCTAGATTTCTAAAATCA
CATAATAAGGATGTTTCCCACCCAGCTGTTCTCCCTGAAGTTTCATACGGGATTCCTGAGTATAATGTGCTCATTTCTTGTCATGAGAACTTGGATCACTCACCCGAAGG
TTGGATTGCTGAATGCCTTAATGATGCTGATATGCATTGTAGCCCCGAGGATTTGAACTTTGCTGGGACTTCGGACATTCAAATCGATGTATCAGAAGATGACATTATTT
TATTCGAACTTGTAGAGTTTTGTGATGGTGCACCCGAGTTCAAACCCAATGCGGTCCAACATCATCCTTCCCGAGCTCCTCCGAACATAATTTTTAAAGGTCGGAAGTCG
TATATTAGAACTCCCACTAAATTGGCTTCTTCAGTTGCCTACCCATTTGCCTTTATCAAGCCCTGTGGATTCCATGGAGATGTGACCTTGAAGGACATAAACCAGCGGAT
CCGCACACCTCCACCATCAAAATTGAAGCATCAACCCGAAGATCCATCTCAATCTTACCCAACTTCAGCTTTCTCTGGTAAGCCTGTAGTAGGCAAAACCAAGATTCACA
CTGAAGGCGGAAAGGGAAGCATCACAATCATGAGGACTAGAGGATGA

mRNA sequence

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Protein sequence

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MYNFISDTWNWDGDGYTIQKDTDIEISECLWDGTVSENGDLSYVFDETTPVKACGDLAYHVTSSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSSRFLKS
HNKDVSHPAVLPEVSYGIPEYNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLNFAGTSDIQIDVSEDDIILFELVEFCDGAPEFKPNAVQHHPSRAPPNIIFKGRKS
YIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG

HG10012121 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome