; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10012122 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10012122
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionE3 ubiquitin-protein ligase At1g63170-like
Genome locationChr01:17882402..17883007
RNA-Seq ExpressionHG10012122
SyntenyHG10012122
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650076.1 hypothetical protein Csa_011336 [Cucumis sativus]3.3e-3740.34Show/hide
Query:  MSVATTAYFQCDLHRIDGTDQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTLPLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITS
        M + + + F+  + R  G +QSL+IRLGR++RL+  SP   +PY+I  E++ IPV   T PLPLR +ED   C  YI   LS F L  V S  I + ITS
Subjt:  MSVATTAYFQCDLHRIDGTDQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTLPLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITS

Query:  SVVELLAAGDYDAKFCVMAEIKRIEL-FW------------------------RVDVEEDPASKSL------------KKENFED----GDCSVCLQEL-
         VVE+L AGDYDAKF ++AEI  I + FW                        RV +E  P  +              KK  F++    GDCSVC +EL 
Subjt:  SVVELLAAGDYDAKFCVMAEIKRIEL-FW------------------------RVDVEEDPASKSL------------KKENFED----GDCSVCLQEL-

Query:  -LKDQMCRIKCGHAYHKSCIFNWFRQSNTCPLCRRSIL
         ++ ++ RI+CGH YHKSCI  W +  N+CPLCRR ++
Subjt:  -LKDQMCRIKCGHAYHKSCIFNWFRQSNTCPLCRRSIL

XP_023539471.1 uncharacterized protein LOC111800118 [Cucurbita pepo subsp. pepo]1.7e-3638.91Show/hide
Query:  MSVATTAYFQCDLHRIDGTDQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTLPLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITS
        MS+A +A F+C+LHR D  DQ L+IR+    RL+  SPF+  P+ I  ET    + +   PLPLR+LEDPLFC AYI  FLS + L A I + I R I S
Subjt:  MSVATTAYFQCDLHRIDGTDQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTLPLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITS

Query:  SVVELLAAGDYDAKFCVMAEIKRIELFW--------------------RVDVEE-----------------DPASKSLKKENFED------GDCSVCLQE
         VV+ +A G+Y+  F ++AEI  I++FW                      D EE                 + A + LKKE F+       G+CSVC  E
Subjt:  SVVELLAAGDYDAKFCVMAEIKRIELFW--------------------RVDVEE-----------------DPASKSLKKENFED------GDCSVCLQE

Query:  LLK--DQMCRIKCGHAYHKSCIFNWFRQSNTCPLCRRSI
        +    +++ RI CGH YHKSC+  W +++N+CPLCR+ +
Subjt:  LLK--DQMCRIKCGHAYHKSCIFNWFRQSNTCPLCRRSI

XP_023539480.1 E3 ubiquitin-protein ligase RNF165-like [Cucurbita pepo subsp. pepo]2.7e-3942.29Show/hide
Query:  MSVATTAYFQCDLHRIDGTDQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTLPLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITS
        MS+A  A F+C+LHR DG DQ L+IR+G   RL+  SPF+  P+ I  ET    + +   PLPLR+LEDPLFC AYI  FLS + L A I + I R I S
Subjt:  MSVATTAYFQCDLHRIDGTDQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTLPLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITS

Query:  SVVELLAAGDYDAKFCVMAEIKRIELFWRVD------VEED-------------------PASKSLKKENFED------GDCSVCLQELLK--DQMCRIK
         VV+ +A G+Y+  F ++AEI  I++FW  D       EED                    A + LKKE F+       G+CSVC  E+    +++ RI 
Subjt:  SVVELLAAGDYDAKFCVMAEIKRIELFWRVD------VEED-------------------PASKSLKKENFED------GDCSVCLQELLK--DQMCRIK

Query:  CGHAYHKSCIFNWFRQSNTCPLCRRSI
        CGH YHKSC+  W +++N+CPLCR  +
Subjt:  CGHAYHKSCIFNWFRQSNTCPLCRRSI

XP_038876865.1 putative RING-H2 finger protein ATL53 [Benincasa hispida]5.0e-4143.97Show/hide
Query:  MSVATTAYFQCDLHRIDGTDQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTLPLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITS
        MS+ T + F+  L R DG DQSL IRLG L RL+  SP + +PY+I  E         T PL LR LEDPLFC AYIA  L    L AV  D + R ITS
Subjt:  MSVATTAYFQCDLHRIDGTDQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTLPLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITS

Query:  SVVELLAAGDYDAKFCVMAEIKRIELFW----------------------RVDVEEDPA--------SKSLKKENFED------GDCSVCLQEL--LKDQ
         VVE+L +G+YD KF + AEI  +++FW                      R  +EE PA        SK LK E F++      GDC VC +EL  ++ +
Subjt:  SVVELLAAGDYDAKFCVMAEIKRIELFW----------------------RVDVEEDPA--------SKSLKKENFED------GDCSVCLQEL--LKDQ

Query:  MCRIKCGHAYHKSCIFNWFRQSNTCPLCRRSI
        + RI+CGH YHKSCI  W +  N+CPLCRR I
Subjt:  MCRIKCGHAYHKSCIFNWFRQSNTCPLCRRSI

XP_038905732.1 E3 ubiquitin-protein ligase arkadia-A-like [Benincasa hispida]1.3e-3642.22Show/hide
Query:  SVATTAYFQCDLHRIDGT-DQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTLPLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITS
        S+ T + F+  L R D + DQSL IRLG + R +  SP   +PY+I  E++ IP+  +  PLPLR LEDPL C  Y+   LS+  L AV  D I  +ITS
Subjt:  SVATTAYFQCDLHRIDGT-DQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTLPLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITS

Query:  SVVELLAAGDYDAKFCVMAEIKRIELFWR---------------VDVEEDP--------ASKSLKKENF------EDGDCSVCLQELL--KDQMCRIKCG
         + E+LAAG+++ KF ++A+I  I +FWR               V +EE P        A + LK+E F      E GDC VC +EL   K ++ RI CG
Subjt:  SVVELLAAGDYDAKFCVMAEIKRIELFWR---------------VDVEEDP--------ASKSLKKENF------EDGDCSVCLQELL--KDQMCRIKCG

Query:  HAYHKSCIFNWFRQSNTCPLCRRSI
        H YHKSCI  W + +++CPLCRR I
Subjt:  HAYHKSCIFNWFRQSNTCPLCRRSI

TrEMBL top hitse value%identityAlignment
A0A5D3BYE9 RING finger protein 165-like protein9.8e-2735.21Show/hide
Query:  SVATTAYFQCDLHRIDGTDQSLEIRLG----RLIRLIYESPFTRIPYKIRTETSLIPVENDTLPLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRN
        S++     +CD    D  DQSL I+LG    +L R  Y  P     + I  E++ +P+     PLPL++L+DP  CH Y    L++  L     D + ++
Subjt:  SVATTAYFQCDLHRIDGTDQSLEIRLG----RLIRLIYESPFTRIPYKIRTETSLIPVENDTLPLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRN

Query:  ITSSVVELLAAGDYDAKFCVMAEIKRIELFWRVDVEEDPASKSL----------KKENFED----GDCSVCLQELL--KDQMCRIKCGHAYHKSCIFNWF
        ITS + E+LAAG+ + KF ++A I R+++ WR +  +                 K + FE+    GDC VC +EL   + ++ RI CGH YHKSCI NW 
Subjt:  ITSSVVELLAAGDYDAKFCVMAEIKRIELFWRVDVEEDPASKSL----------KKENFED----GDCSVCLQELL--KDQMCRIKCGHAYHKSCIFNWF

Query:  RQSNTCPLCRRSI
         ++++CPLCR  I
Subjt:  RQSNTCPLCRRSI

A0A6J1G7L1 NEP1-interacting protein-like 11.7e-3440.47Show/hide
Query:  MSVATTAYFQCDLHRIDGTDQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTLPLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITS
        M  A  +  +  L R  G DQ L++RLG   RLI  SP   +PY I  ET   P+ +   PLPLR+LEDPLFCHAY+   +S F L +V  + I + ITS
Subjt:  MSVATTAYFQCDLHRIDGTDQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTLPLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITS

Query:  SVVELLAAGDYDAKFCVMAEIKRIELFW----------------RVDVEEDPASKSLKKENFEDGDCSVCLQELLKD-----QMCRIKCGHAYHKSCIFN
         V +  AA DYDAKF ++A+I  I++FW                RV +EE   + + +K+     +CSVC +    +     ++ +I CGHA+HKSCI  
Subjt:  SVVELLAAGDYDAKFCVMAEIKRIELFW----------------RVDVEEDPASKSLKKENFEDGDCSVCLQELLKD-----QMCRIKCGHAYHKSCIFN

Query:  WFRQSNTCPLCRRSI
        WF++SN+CPLCR  +
Subjt:  WFRQSNTCPLCRRSI

A0A6J1G7R8 E3 ubiquitin-protein ligase MBR2-like1.4e-3339.63Show/hide
Query:  MSVATTAYFQCDLHRIDGTDQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTLPLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITS
        M  A ++  +  L R DGTDQ L++RLG   RLI  SP++ +PY I  ET    + +   PLPLR+LEDPLFCHAY+   +S   L ++  + I + ITS
Subjt:  MSVATTAYFQCDLHRIDGTDQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTLPLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITS

Query:  SVVELLAAGDYDAKFCVMAEIKRIELFWR----------VDVEED--------PASKSLKKENFEDGDCSVCLQELLKD-----QMCRIKCGHAYHKSCI
         V +  AA DYD KF ++A+I  I++FWR          V VEE          A+ +  K+     +CSVC +   ++     ++ +I CGH +HKSCI
Subjt:  SVVELLAAGDYDAKFCVMAEIKRIELFWR----------VDVEED--------PASKSLKKENFEDGDCSVCLQELLKD-----QMCRIKCGHAYHKSCI

Query:  FNWFRQSNTCPLCRRSI
          WF  SN+CPLCR  +
Subjt:  FNWFRQSNTCPLCRRSI

A0A6J1L186 NEP1-interacting protein-like 15.9e-3239.25Show/hide
Query:  MSVATTAYFQCDLHRIDGTDQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTLPLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITS
        M +A  +  +  L R  G DQ L  RL    RLI  SP   +PY I  ET   P+ +   PLPLR+LEDPLFCHAY+   +S   L ++  + I + ITS
Subjt:  MSVATTAYFQCDLHRIDGTDQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTLPLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITS

Query:  SVVELLAAGDYDAKFCVMAEIKRIELFWR----------VDVEEDPASK-----SLKKENFEDGDCSVCLQELLKD-----QMCRIKCGHAYHKSCIFNW
         V +  AA DYDAKF ++A+I  I++FW           V VEE    K     + +K+     +CSVC +    +     ++ +I CGH +HKSCI  W
Subjt:  SVVELLAAGDYDAKFCVMAEIKRIELFWR----------VDVEEDPASK-----SLKKENFEDGDCSVCLQELLKD-----QMCRIKCGHAYHKSCIFNW

Query:  FRQSNTCPLCRRSI
        F++SN+CPLCR  +
Subjt:  FRQSNTCPLCRRSI

A0A6J1L191 E3 ubiquitin-protein ligase At1g63170-like1.4e-3339.55Show/hide
Query:  MSVATTAYFQCDLHRIDGTDQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTLPLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITS
        M  A ++  +  L R  GTDQ L++RLG   RLI +SP   +PY I  ET L P+ +   PLPLR+LEDPLFCHAY+   +S   L ++  + I + ITS
Subjt:  MSVATTAYFQCDLHRIDGTDQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTLPLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITS

Query:  SVVELLAAGDYDAKFCVMAEIKRIELFWR----------VDVEE-----------DPASKSLKKENFEDGDCSVCLQELLKD-----QMCRIKCGHAYHK
         V +  AA DYDAKF ++ +I  I++FWR          V VEE             A+ +  K+     +CSVC +   ++     ++ +I CGH +HK
Subjt:  SVVELLAAGDYDAKFCVMAEIKRIELFWR----------VDVEE-----------DPASKSLKKENFEDGDCSVCLQELLKD-----QMCRIKCGHAYHK

Query:  SCIFNWFRQSNTCPLCRRSI
        SCI  WF+ SN+CPLCR  +
Subjt:  SCIFNWFRQSNTCPLCRRSI

SwissProt top hitse value%identityAlignment
Q8LFY8 RING-H2 finger protein ATL546.4e-0746.43Show/hide
Query:  EDGDCSVCLQELLKDQMCRI--KCGHAYHKSCIFNWFRQSNTCPLCRRSILKIVKT
        E  DC VCL E  +D+  R+  KC HA+H SCI  W      CPLCR  I  I  T
Subjt:  EDGDCSVCLQELLKDQMCRI--KCGHAYHKSCIFNWFRQSNTCPLCRRSILKIVKT

Q940Q4 RING-H2 finger protein ATL131.8e-0647.92Show/hide
Query:  DCSVCLQELLKDQMCRI--KCGHAYHKSCIFNWFRQSNTCPLCRRSIL
        DC+VCL E   +   R+  KC HA+H  CI  W    +TCPLCR S+L
Subjt:  DCSVCLQELLKDQMCRI--KCGHAYHKSCIFNWFRQSNTCPLCRRSIL

Q9FG21 Putative RING-H2 finger protein ATL711.7e-0739.19Show/hide
Query:  IELFWRVDVEEDPASKSLKKENFEDGDCSVCLQELLKDQMCRI--KCGHAYHKSCIFNWFRQSNTCPLCRRSIL
        I+ F ++  EE   S SL+KE+     CS+CL +  K  M R+   C H +H +C+  W R   TCP+CR S L
Subjt:  IELFWRVDVEEDPASKSLKKENFEDGDCSVCLQELLKDQMCRI--KCGHAYHKSCIFNWFRQSNTCPLCRRSIL

Q9LRB7 E3 ubiquitin-protein ligase EL51.4e-0639.06Show/hide
Query:  ASKSLKKENFEDGD---CSVCLQELLKDQMCRI--KCGHAYHKSCIFNWFRQSNTCPLCRRSIL
        A+ + K+E  ED D   C+VCL EL   +  R   +CGH +H  C+  W    +TCPLCR +++
Subjt:  ASKSLKKENFEDGD---CSVCLQELLKDQMCRI--KCGHAYHKSCIFNWFRQSNTCPLCRRSIL

Q9XF63 RING-H2 finger protein ATL32.0e-0842.11Show/hide
Query:  KKENFEDG-DCSVCLQELLKDQMCRI--KCGHAYHKSCIFNWFRQSNTCPLCRRSIL
        ++++ +DG +CS+CL EL+K    R+  KC H++H  CI  WF+  +TCP+CR ++L
Subjt:  KKENFEDG-DCSVCLQELLKDQMCRI--KCGHAYHKSCIFNWFRQSNTCPLCRRSIL

Arabidopsis top hitse value%identityAlignment
AT1G72310.1 RING/U-box superfamily protein1.4e-0942.11Show/hide
Query:  KKENFEDG-DCSVCLQELLKDQMCRI--KCGHAYHKSCIFNWFRQSNTCPLCRRSIL
        ++++ +DG +CS+CL EL+K    R+  KC H++H  CI  WF+  +TCP+CR ++L
Subjt:  KKENFEDG-DCSVCLQELLKDQMCRI--KCGHAYHKSCIFNWFRQSNTCPLCRRSIL

AT3G30460.1 RING/U-box superfamily protein3.1e-0934.83Show/hide
Query:  GDYDAKFCVMAEIKRIELFWRVDVEEDPASKSLKKENFEDG--DCSVCLQEL-LKDQMCRIKCGHAYHKSCIFNWFRQSNTCPLCRRSI
        G YD  F ++         W    EE P  +   +E  E G   C++C +EL   +++  + C H YHK CI NW    NTCPLCR ++
Subjt:  GDYDAKFCVMAEIKRIELFWRVDVEEDPASKSLKKENFEDG--DCSVCLQEL-LKDQMCRIKCGHAYHKSCIFNWFRQSNTCPLCRRSI

AT4G12140.1 RING/U-box superfamily protein1.1e-0942.11Show/hide
Query:  SKSLKKENFEDGDCSVCLQELL---KDQMCRIKCGHAYHKSCIFNWFRQSNTCPLCR
        ++ LK  N E   CS+CLQ L+   K    R+ C H +H SC+  W ++ NTCP+CR
Subjt:  SKSLKKENFEDGDCSVCLQELL---KDQMCRIKCGHAYHKSCIFNWFRQSNTCPLCR

AT4G12210.1 RING/U-box superfamily protein1.4e-0936.84Show/hide
Query:  RIELFWRVDVEEDPASKSLKKENFEDGDCSVCLQELLK----DQMCRIKCGHAYHKSCIFNWFRQSNTCPLCRRSI
        RI L  R+  EE      LK    E   CS+CL+ L+       + R+ C H +H  C+  WF + NTCPLCR  +
Subjt:  RIELFWRVDVEEDPASKSLKKENFEDGDCSVCLQELLK----DQMCRIKCGHAYHKSCIFNWFRQSNTCPLCRRSI

AT5G41430.1 RING/U-box superfamily protein2.4e-0942.42Show/hide
Query:  WRVDVEEDPASKSLKKENFEDGDCSVCLQELLK-DQMCRI-KCGHAYHKSCIFNWFRQSNTCPLCR
        +R  +EE    K ++KE F++  CS+CL+EL    ++ RI KC H +H+SCI +W +Q+ +CP CR
Subjt:  WRVDVEEDPASKSLKKENFEDGDCSVCLQELLK-DQMCRI-KCGHAYHKSCIFNWFRQSNTCPLCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTGGCAACTACTGCCTACTTCCAGTGCGATCTCCACCGCATTGACGGAACCGATCAATCTCTCGAAATCCGATTGGGGCGATTGATACGTCTGATCTACGAAAG
CCCATTCACCAGAATTCCGTACAAGATCCGGACAGAAACTTCCTTGATTCCAGTGGAGAATGATACGCTCCCTCTCCCTCTGAGAAAGCTCGAAGATCCCCTGTTCTGCC
ATGCTTACATCGCTTCCTTTCTTTCCTTCTTCAAACTCCCCGCCGTAATCTCGGATCAAATCTGTCGCAACATCACGTCGTCCGTCGTTGAATTATTGGCCGCCGGAGAC
TACGACGCCAAGTTCTGCGTTATGGCAGAAATCAAGCGCATCGAACTGTTCTGGCGGGTGGATGTGGAAGAAGATCCGGCGAGTAAGAGTTTGAAGAAGGAGAATTTTGA
AGATGGAGATTGCTCTGTTTGTCTTCAAGAACTACTGAAGGACCAGATGTGCAGAATCAAGTGCGGTCATGCCTATCATAAATCCTGCATTTTTAATTGGTTTAGACAGA
GCAACACTTGTCCTTTGTGCAGAAGAAGTATTCTAAAAATTGTCAAAACGCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGTGGCAACTACTGCCTACTTCCAGTGCGATCTCCACCGCATTGACGGAACCGATCAATCTCTCGAAATCCGATTGGGGCGATTGATACGTCTGATCTACGAAAG
CCCATTCACCAGAATTCCGTACAAGATCCGGACAGAAACTTCCTTGATTCCAGTGGAGAATGATACGCTCCCTCTCCCTCTGAGAAAGCTCGAAGATCCCCTGTTCTGCC
ATGCTTACATCGCTTCCTTTCTTTCCTTCTTCAAACTCCCCGCCGTAATCTCGGATCAAATCTGTCGCAACATCACGTCGTCCGTCGTTGAATTATTGGCCGCCGGAGAC
TACGACGCCAAGTTCTGCGTTATGGCAGAAATCAAGCGCATCGAACTGTTCTGGCGGGTGGATGTGGAAGAAGATCCGGCGAGTAAGAGTTTGAAGAAGGAGAATTTTGA
AGATGGAGATTGCTCTGTTTGTCTTCAAGAACTACTGAAGGACCAGATGTGCAGAATCAAGTGCGGTCATGCCTATCATAAATCCTGCATTTTTAATTGGTTTAGACAGA
GCAACACTTGTCCTTTGTGCAGAAGAAGTATTCTAAAAATTGTCAAAACGCTATAA
Protein sequenceShow/hide protein sequence
MSVATTAYFQCDLHRIDGTDQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTLPLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITSSVVELLAAGD
YDAKFCVMAEIKRIELFWRVDVEEDPASKSLKKENFEDGDCSVCLQELLKDQMCRIKCGHAYHKSCIFNWFRQSNTCPLCRRSILKIVKTL