; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10012129 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10012129
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionE3 ubiquitin-protein ligase RNF4-like
Genome locationChr01:17935087..17939616
RNA-Seq ExpressionHG10012129
SyntenyHG10012129
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144388.1 E3 ubiquitin-protein ligase RNF4 [Cucumis sativus]1.3e-10094.17Show/hide
Query:  MSTQTMRGHTARGYHRRKSMDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
        MSTQ MRGHT RGYHRRKS+DLDLNSMPPTENRDQGETSQLR Q+AQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN+VDVDAEERS
Subjt:  MSTQTMRGHTARGYHRRKSMDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS

Query:  KVSNNNRSKRRRDVSNQQPVNSDLLINLEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRVFL
        +VSNNNRSKRRRDVSN+  VNSDLLINLEASNSSMKVKP+PPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAI VQSKCPTCRKRVTAKELIRVFL
Subjt:  KVSNNNRSKRRRDVSNQQPVNSDLLINLEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRVFL

Query:  PGTSLE
        PGTSLE
Subjt:  PGTSLE

XP_008460369.1 PREDICTED: E3 ubiquitin-protein ligase RNF4-like isoform X1 [Cucumis melo]1.1e-9993.2Show/hide
Query:  MSTQTMRGHTARGYHRRKSMDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
        MSTQ MRGH  RGYHRRKS+DLDLNSMPPTENRDQGETSQLR Q+AQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN+VDVDAEERS
Subjt:  MSTQTMRGHTARGYHRRKSMDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS

Query:  KVSNNNRSKRRRDVSNQQPVNSDLLINLEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRVFL
        +VSNNNRSKRRRDVSN+  VNSDLLINLEASNSSMKVKP+PPKEPKFSCPICMGPLVEETST+CGHIFCKACIRAAI VQSKCPTCRKRVTAKELIRVFL
Subjt:  KVSNNNRSKRRRDVSNQQPVNSDLLINLEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRVFL

Query:  PGTSLE
        PGTSLE
Subjt:  PGTSLE

XP_008460373.1 PREDICTED: E3 ubiquitin-protein ligase RNF4-like isoform X2 [Cucumis melo]8.2e-9892.72Show/hide
Query:  MSTQTMRGHTARGYHRRKSMDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
        MSTQ MRGH  RGYHRRKS+DLDLNSMPPTENRDQGETSQLR Q+AQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN+VDVDA ERS
Subjt:  MSTQTMRGHTARGYHRRKSMDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS

Query:  KVSNNNRSKRRRDVSNQQPVNSDLLINLEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRVFL
        +VSNNNRSKRRRDVSN+  VNSDLLINLEASNSSMKVKP+PPKEPKFSCPICMGPLVEETST+CGHIFCKACIRAAI VQSKCPTCRKRVTAKELIRVFL
Subjt:  KVSNNNRSKRRRDVSNQQPVNSDLLINLEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRVFL

Query:  PGTSLE
        PGTSLE
Subjt:  PGTSLE

XP_022967334.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima]4.1e-9792.23Show/hide
Query:  MSTQTMRGHTARGYHRRKSMDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
        MST+ MRGHTARGYHRRKS+DLDLNSMPPTENRDQGETSQ  FQEAQVNQQQ VQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
Subjt:  MSTQTMRGHTARGYHRRKSMDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS

Query:  KVSNNNRSKRRRDVSNQQPVNSDLLINLEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRVFL
        + SNNNRSKRRRDV NQQ VNSDLLINLEASNSSMK K +PPKEP FSCPICMGPLVEETSTRCGHIFCKACI+ AIAVQSKCPTCRKRVTAKELIRVFL
Subjt:  KVSNNNRSKRRRDVSNQQPVNSDLLINLEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRVFL

Query:  PGTSLE
        PGTSLE
Subjt:  PGTSLE

XP_038888129.1 E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida]1.9e-10296.6Show/hide
Query:  MSTQTMRGHTARGYHRRKSMDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
        MSTQ MRGHTARGYHRRKS+DLDLNSMPPTENRDQGETSQLRFQEAQVNQQQ VQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEE +
Subjt:  MSTQTMRGHTARGYHRRKSMDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS

Query:  KVSNNNRSKRRRDVSNQQPVNSDLLINLEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRVFL
        KVSNNNRSKRRRDVSNQQPVNSDLLINLEASNSSMKVKP+PPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQ+KCPTCRKRVTAKELIRVFL
Subjt:  KVSNNNRSKRRRDVSNQQPVNSDLLINLEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRVFL

Query:  PGTSLE
        PGTSLE
Subjt:  PGTSLE

TrEMBL top hitse value%identityAlignment
A0A1S3CBW2 E3 ubiquitin-protein ligase RNF4-like isoform X24.0e-9892.72Show/hide
Query:  MSTQTMRGHTARGYHRRKSMDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
        MSTQ MRGH  RGYHRRKS+DLDLNSMPPTENRDQGETSQLR Q+AQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN+VDVDA ERS
Subjt:  MSTQTMRGHTARGYHRRKSMDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS

Query:  KVSNNNRSKRRRDVSNQQPVNSDLLINLEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRVFL
        +VSNNNRSKRRRDVSN+  VNSDLLINLEASNSSMKVKP+PPKEPKFSCPICMGPLVEETST+CGHIFCKACIRAAI VQSKCPTCRKRVTAKELIRVFL
Subjt:  KVSNNNRSKRRRDVSNQQPVNSDLLINLEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRVFL

Query:  PGTSLE
        PGTSLE
Subjt:  PGTSLE

A0A1S3CCB4 E3 ubiquitin-protein ligase RNF4-like isoform X15.5e-10093.2Show/hide
Query:  MSTQTMRGHTARGYHRRKSMDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
        MSTQ MRGH  RGYHRRKS+DLDLNSMPPTENRDQGETSQLR Q+AQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN+VDVDAEERS
Subjt:  MSTQTMRGHTARGYHRRKSMDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS

Query:  KVSNNNRSKRRRDVSNQQPVNSDLLINLEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRVFL
        +VSNNNRSKRRRDVSN+  VNSDLLINLEASNSSMKVKP+PPKEPKFSCPICMGPLVEETST+CGHIFCKACIRAAI VQSKCPTCRKRVTAKELIRVFL
Subjt:  KVSNNNRSKRRRDVSNQQPVNSDLLINLEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRVFL

Query:  PGTSLE
        PGTSLE
Subjt:  PGTSLE

A0A6J1E010 E3 ubiquitin-protein ligase RNF4 isoform X25.9e-9489.81Show/hide
Query:  MSTQTMRGHTARGYHRRKSMDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
        MSTQ MRG TARGYHRRKS+DLDLNSMPP+ENRDQGE SQL  QEA  NQQQP+QP MIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
Subjt:  MSTQTMRGHTARGYHRRKSMDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS

Query:  KVSNNNRSKRRRDVSNQQPVNSDLLINLEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRVFL
        +VSNN RSKRRR+VSNQ+ VNS+LLINLEASNSS+K KP PPKEPKFSCPICMGPLVEETSTRCGHIFCKACI+AAIAVQSKCPTCRKRVTAKELIRVFL
Subjt:  KVSNNNRSKRRRDVSNQQPVNSDLLINLEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRVFL

Query:  PGTSLE
        PGTSLE
Subjt:  PGTSLE

A0A6J1HFU4 E3 ubiquitin-protein ligase RNF4-like9.7e-9791.75Show/hide
Query:  MSTQTMRGHTARGYHRRKSMDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
        MSTQ MRGHTARGYHRRKS+DLDLNSMPPTENRDQGETSQ  F EAQVNQQQ VQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
Subjt:  MSTQTMRGHTARGYHRRKSMDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS

Query:  KVSNNNRSKRRRDVSNQQPVNSDLLINLEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRVFL
        + SNNNRSKRRRDV NQQ VNSDLLINLE SNSSMK K +PPKEP FSCPICMGPLVEETSTRCGHIFCKACI+ AIAVQSKCPTCRKRVTAKELIRVFL
Subjt:  KVSNNNRSKRRRDVSNQQPVNSDLLINLEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRVFL

Query:  PGTSLE
        PGTSLE
Subjt:  PGTSLE

A0A6J1HQI7 E3 ubiquitin-protein ligase RNF4-like2.0e-9792.23Show/hide
Query:  MSTQTMRGHTARGYHRRKSMDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
        MST+ MRGHTARGYHRRKS+DLDLNSMPPTENRDQGETSQ  FQEAQVNQQQ VQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS
Subjt:  MSTQTMRGHTARGYHRRKSMDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERS

Query:  KVSNNNRSKRRRDVSNQQPVNSDLLINLEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRVFL
        + SNNNRSKRRRDV NQQ VNSDLLINLEASNSSMK K +PPKEP FSCPICMGPLVEETSTRCGHIFCKACI+ AIAVQSKCPTCRKRVTAKELIRVFL
Subjt:  KVSNNNRSKRRRDVSNQQPVNSDLLINLEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRVFL

Query:  PGTSLE
        PGTSLE
Subjt:  PGTSLE

SwissProt top hitse value%identityAlignment
B5DF45 TNF receptor-associated factor 62.2e-0551.02Show/hide
Query:  VKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIA-VQSKCP
        V+  PP E K+ CPIC+  L E   T CGH FCKACI  +I     KCP
Subjt:  VKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIA-VQSKCP

E7FDW2 E3 ubiquitin-protein ligase PDZRN3-B2.9e-0538.18Show/hide
Query:  EPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRV
        +P F C +C   L +  +T CGH+FC  C+   +  QS CP   +R++ KEL  V
Subjt:  EPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRV

Q28DL4 TNF receptor-associated factor 62.9e-0543.33Show/hide
Query:  VKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIA-VQSKCPTCRKRVTAKEL
        V+  PP E K+ CPIC+  L E   T CGH FCKACI  +I     KCP   + +   +L
Subjt:  VKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIA-VQSKCPTCRKRVTAKEL

Q3MV19 TNF receptor-associated factor 6-A2.2e-0543.33Show/hide
Query:  VKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIA-VQSKCPTCRKRVTAKEL
        V+  PP E K+ CPIC+  L E   T CGH FCKACI  ++     KCP   + +  K+L
Subjt:  VKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIA-VQSKCPTCRKRVTAKEL

Q9CQ29 RING finger protein 1518.1e-0845.61Show/hide
Query:  PKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRV
        P + KF C +C G L   T   C HIFCK CI   +A Q+ CP CRK VT ++++ V
Subjt:  PKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRV

Arabidopsis top hitse value%identityAlignment
AT3G07200.1 RING/U-box superfamily protein2.4e-3150Show/hide
Query:  TENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAI--DDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSKVSNNNRSKRRRDVSNQQPVNSDLLIN
        T+N  QG+  Q    +A    Q    P  I++ AI  DDDV+ES+A AFA+AKNKS R+AR+    VD E     +  NRS RRR  S+Q  V+S   + 
Subjt:  TENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAI--DDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSKVSNNNRSKRRRDVSNQQPVNSDLLIN

Query:  LEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRVFLPGT
        L     S  V P P +EPKFSCPIC+ P  +E ST+CGHIFCK CI+ A+++Q+KCPTCRK++T K+LIRVFLP T
Subjt:  LEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRVFLPGT

AT3G07200.2 RING/U-box superfamily protein2.4e-3150Show/hide
Query:  TENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAI--DDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSKVSNNNRSKRRRDVSNQQPVNSDLLIN
        T+N  QG+  Q    +A    Q    P  I++ AI  DDDV+ES+A AFA+AKNKS R+AR+    VD E     +  NRS RRR  S+Q  V+S   + 
Subjt:  TENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAI--DDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSKVSNNNRSKRRRDVSNQQPVNSDLLIN

Query:  LEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRVFLPGT
        L     S  V P P +EPKFSCPIC+ P  +E ST+CGHIFCK CI+ A+++Q+KCPTCRK++T K+LIRVFLP T
Subjt:  LEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRVFLPGT

AT5G48655.1 RING/U-box superfamily protein1.3e-4048.57Show/hide
Query:  MSTQTMRGHTARGYHRRKSMDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN--IVDVDAEE
        M+T  +R    RG  RRK++ +DLN++P  +   +G ++ +R     +   QP  P MID++AI+DDVIESSA AFAEAK+KS RNAR+   +VDV++  
Subjt:  MSTQTMRGHTARGYHRRKSMDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN--IVDVDAEE

Query:  RSKVSNNNRSKRRRDVSNQQPVNSDLL-----INLEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAK
         ++   N  +KRRR  S++  ++ +       +N+ +  S  K    PP+EPKF+CPICM P  EE ST+CGHIFCK CI+ AI+ Q KCPTCRK+VTAK
Subjt:  RSKVSNNNRSKRRRDVSNQQPVNSDLL-----INLEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAK

Query:  ELIRVFLPGT
        ELIRVFLP T
Subjt:  ELIRVFLPGT

AT5G48655.2 RING/U-box superfamily protein1.3e-4048.57Show/hide
Query:  MSTQTMRGHTARGYHRRKSMDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN--IVDVDAEE
        M+T  +R    RG  RRK++ +DLN++P  +   +G ++ +R     +   QP  P MID++AI+DDVIESSA AFAEAK+KS RNAR+   +VDV++  
Subjt:  MSTQTMRGHTARGYHRRKSMDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN--IVDVDAEE

Query:  RSKVSNNNRSKRRRDVSNQQPVNSDLL-----INLEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAK
         ++   N  +KRRR  S++  ++ +       +N+ +  S  K    PP+EPKF+CPICM P  EE ST+CGHIFCK CI+ AI+ Q KCPTCRK+VTAK
Subjt:  RSKVSNNNRSKRRRDVSNQQPVNSDLL-----INLEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAK

Query:  ELIRVFLPGT
        ELIRVFLP T
Subjt:  ELIRVFLPGT

AT5G48655.3 RING/U-box superfamily protein1.3e-4048.57Show/hide
Query:  MSTQTMRGHTARGYHRRKSMDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN--IVDVDAEE
        M+T  +R    RG  RRK++ +DLN++P  +   +G ++ +R     +   QP  P MID++AI+DDVIESSA AFAEAK+KS RNAR+   +VDV++  
Subjt:  MSTQTMRGHTARGYHRRKSMDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKN--IVDVDAEE

Query:  RSKVSNNNRSKRRRDVSNQQPVNSDLL-----INLEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAK
         ++   N  +KRRR  S++  ++ +       +N+ +  S  K    PP+EPKF+CPICM P  EE ST+CGHIFCK CI+ AI+ Q KCPTCRK+VTAK
Subjt:  RSKVSNNNRSKRRRDVSNQQPVNSDLL-----INLEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAK

Query:  ELIRVFLPGT
        ELIRVFLP T
Subjt:  ELIRVFLPGT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATAGCAGGTTGCTGAGGAGCTCCAAAATATCGATGAGTACTCAGACAATGAGGGGACATACGGCAAGAGGTTATCATCGTAGGAAATCAATGGACTTGGACCTAAA
TAGCATGCCACCGACTGAGAATCGAGATCAAGGAGAGACATCTCAATTGAGGTTTCAGGAAGCACAGGTTAATCAACAACAGCCCGTACAACCTGCAATGATTGACATTG
AGGCAATTGATGACGATGTCATTGAATCATCCGCCAGAGCTTTTGCTGAAGCTAAAAATAAATCCAGGCGGAATGCTAGGAAGAATATAGTTGACGTGGATGCAGAAGAG
CGGAGCAAGGTGTCAAATAATAACCGGAGCAAGCGTAGGAGAGATGTGTCTAATCAACAACCTGTAAATTCTGATTTATTAATCAATTTGGAAGCCAGCAACAGCTCTAT
GAAAGTGAAGCCTTCTCCACCGAAGGAGCCCAAATTCAGTTGTCCAATATGCATGGGTCCGTTAGTAGAAGAAACATCAACAAGGTGTGGTCATATTTTCTGCAAGGCAT
GCATCAGGGCTGCAATAGCCGTCCAAAGTAAATGCCCAACATGTAGAAAGAGAGTAACTGCCAAAGAACTGATTAGAGTATTCCTTCCTGGGACAAGCTTGGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATAGCAGGTTGCTGAGGAGCTCCAAAATATCGATGAGTACTCAGACAATGAGGGGACATACGGCAAGAGGTTATCATCGTAGGAAATCAATGGACTTGGACCTAAA
TAGCATGCCACCGACTGAGAATCGAGATCAAGGAGAGACATCTCAATTGAGGTTTCAGGAAGCACAGGTTAATCAACAACAGCCCGTACAACCTGCAATGATTGACATTG
AGGCAATTGATGACGATGTCATTGAATCATCCGCCAGAGCTTTTGCTGAAGCTAAAAATAAATCCAGGCGGAATGCTAGGAAGAATATAGTTGACGTGGATGCAGAAGAG
CGGAGCAAGGTGTCAAATAATAACCGGAGCAAGCGTAGGAGAGATGTGTCTAATCAACAACCTGTAAATTCTGATTTATTAATCAATTTGGAAGCCAGCAACAGCTCTAT
GAAAGTGAAGCCTTCTCCACCGAAGGAGCCCAAATTCAGTTGTCCAATATGCATGGGTCCGTTAGTAGAAGAAACATCAACAAGGTGTGGTCATATTTTCTGCAAGGCAT
GCATCAGGGCTGCAATAGCCGTCCAAAGTAAATGCCCAACATGTAGAAAGAGAGTAACTGCCAAAGAACTGATTAGAGTATTCCTTCCTGGGACAAGCTTGGAGTGA
Protein sequenceShow/hide protein sequence
MYSRLLRSSKISMSTQTMRGHTARGYHRRKSMDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEE
RSKVSNNNRSKRRRDVSNQQPVNSDLLINLEASNSSMKVKPSPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQSKCPTCRKRVTAKELIRVFLPGTSLE