; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10012139 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10012139
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionSpc97 / Spc98 family of spindle pole body (SBP) component
Genome locationChr01:18001577..18002780
RNA-Seq ExpressionHG10012139
SyntenyHG10012139
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0005319 - lipid transporter activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055731.1 hypothetical protein E6C27_scaffold181G001160 [Cucumis melo var. makuwa]9.2e-5289.26Show/hide
Query:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDLAEKFDLKTLRAIGFVLMEHLKGELRASDVPDLSQSATLNGCNLLDNNLEKI
        MEEA EILKNNR+EDI+WLCSLSESELD+LISIKMLVLQRAK IGH++LAEKFDLKTLRAIGFVLMEHLKGELR SDV DLSQSATLN CNLLD+N+EKI
Subjt:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDLAEKFDLKTLRAIGFVLMEHLKGELRASDVPDLSQSATLNGCNLLDNNLEKI

Query:  LSIDEIMESICSDRRKKPGKR
        LSIDEIM SICSDRRKKPGKR
Subjt:  LSIDEIMESICSDRRKKPGKR

XP_008450999.1 PREDICTED: uncharacterized protein LOC103492413 [Cucumis melo]9.2e-5289.26Show/hide
Query:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDLAEKFDLKTLRAIGFVLMEHLKGELRASDVPDLSQSATLNGCNLLDNNLEKI
        MEEA EILKNNR+EDI+WLCSLSESELD+LISIKMLVLQRAK IGH++LAEKFDLKTLRAIGFVLMEHLKGELR SDV DLSQSATLN CNLLD+N+EKI
Subjt:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDLAEKFDLKTLRAIGFVLMEHLKGELRASDVPDLSQSATLNGCNLLDNNLEKI

Query:  LSIDEIMESICSDRRKKPGKR
        LSIDEIM SICSDRRKKPGKR
Subjt:  LSIDEIMESICSDRRKKPGKR

XP_011651663.2 uncharacterized protein LOC101210446 [Cucumis sativus]4.3e-4987.6Show/hide
Query:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDLAEKFDLKTLRAIGFVLMEHLKGELRASDVPDLSQSATLNGCNLLDNNLEKI
        MEEA EILKNNRIEDI+WLCSLSESELD+LISIKMLVLQRAK IGH++LAEKFDL+TLRAIGFVLMEHLKG+LR SDV DLSQS T N CNLLD+NLEKI
Subjt:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDLAEKFDLKTLRAIGFVLMEHLKGELRASDVPDLSQSATLNGCNLLDNNLEKI

Query:  LSIDEIMESICSDRRKKPGKR
        LSIDEIM SICSDRRKKPGKR
Subjt:  LSIDEIMESICSDRRKKPGKR

XP_022156102.1 uncharacterized protein LOC111023068 [Momordica charantia]4.6e-5188.43Show/hide
Query:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDLAEKFDLKTLRAIGFVLMEHLKGELRASDVPDLSQSATLNGCNLLDNNLEKI
        MEEAKEILK+NRIED++WLCSLSESELDMLISIKMLVLQRAK+IGH+ LAEKFDLKTLRAIGF LMEHLKG+LRASDVPD SQSA LNGCNLLD +LEKI
Subjt:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDLAEKFDLKTLRAIGFVLMEHLKGELRASDVPDLSQSATLNGCNLLDNNLEKI

Query:  LSIDEIMESICSDRRKKPGKR
        LSIDEIM S+CSDRRKKPGKR
Subjt:  LSIDEIMESICSDRRKKPGKR

XP_038902583.1 uncharacterized protein LOC120089238 [Benincasa hispida]2.2e-5391.74Show/hide
Query:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDLAEKFDLKTLRAIGFVLMEHLKGELRASDVPDLSQSATLNGCNLLDNNLEKI
        MEEAKEI K+NRIEDI+WLCSLSESELDMLISIKMLVLQRAKVIGH+DLA+KFDLKT+RAIGFVLMEHLKGEL+ASDVPDLSQSA LNGCNLLD+NLEKI
Subjt:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDLAEKFDLKTLRAIGFVLMEHLKGELRASDVPDLSQSATLNGCNLLDNNLEKI

Query:  LSIDEIMESICSDRRKKPGKR
        LSIDEIM SICSDRRKKPGKR
Subjt:  LSIDEIMESICSDRRKKPGKR

TrEMBL top hitse value%identityAlignment
A0A1S3BQH9 uncharacterized protein LOC1034924134.5e-5289.26Show/hide
Query:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDLAEKFDLKTLRAIGFVLMEHLKGELRASDVPDLSQSATLNGCNLLDNNLEKI
        MEEA EILKNNR+EDI+WLCSLSESELD+LISIKMLVLQRAK IGH++LAEKFDLKTLRAIGFVLMEHLKGELR SDV DLSQSATLN CNLLD+N+EKI
Subjt:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDLAEKFDLKTLRAIGFVLMEHLKGELRASDVPDLSQSATLNGCNLLDNNLEKI

Query:  LSIDEIMESICSDRRKKPGKR
        LSIDEIM SICSDRRKKPGKR
Subjt:  LSIDEIMESICSDRRKKPGKR

A0A1S3CBX7 uncharacterized protein LOC1034992203.9e-4886.78Show/hide
Query:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDLAEKFDLKTLRAIGFVLMEHLKGELRASDVPDLSQSATLNGCNLLDNNLEKI
        MEEA EILKNNRIEDI+WLCSLSESELD+LISIKMLVLQRAK IGH++LAEKFDLKTLR IGFVLMEHLKGELR SDV DLSQSA LN CNLLD+NLEK 
Subjt:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDLAEKFDLKTLRAIGFVLMEHLKGELRASDVPDLSQSATLNGCNLLDNNLEKI

Query:  LSIDEIMESICSDRRKKPGKR
        L IDEIM SIC DRRKKPGKR
Subjt:  LSIDEIMESICSDRRKKPGKR

A0A5A7UQA1 Uncharacterized protein4.5e-5289.26Show/hide
Query:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDLAEKFDLKTLRAIGFVLMEHLKGELRASDVPDLSQSATLNGCNLLDNNLEKI
        MEEA EILKNNR+EDI+WLCSLSESELD+LISIKMLVLQRAK IGH++LAEKFDLKTLRAIGFVLMEHLKGELR SDV DLSQSATLN CNLLD+N+EKI
Subjt:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDLAEKFDLKTLRAIGFVLMEHLKGELRASDVPDLSQSATLNGCNLLDNNLEKI

Query:  LSIDEIMESICSDRRKKPGKR
        LSIDEIM SICSDRRKKPGKR
Subjt:  LSIDEIMESICSDRRKKPGKR

A0A6J1DR49 uncharacterized protein LOC1110230682.2e-5188.43Show/hide
Query:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDLAEKFDLKTLRAIGFVLMEHLKGELRASDVPDLSQSATLNGCNLLDNNLEKI
        MEEAKEILK+NRIED++WLCSLSESELDMLISIKMLVLQRAK+IGH+ LAEKFDLKTLRAIGF LMEHLKG+LRASDVPD SQSA LNGCNLLD +LEKI
Subjt:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDLAEKFDLKTLRAIGFVLMEHLKGELRASDVPDLSQSATLNGCNLLDNNLEKI

Query:  LSIDEIMESICSDRRKKPGKR
        LSIDEIM S+CSDRRKKPGKR
Subjt:  LSIDEIMESICSDRRKKPGKR

A0A6J1K2S6 uncharacterized protein LOC1114911895.1e-4883.47Show/hide
Query:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDLAEKFDLKTLRAIGFVLMEHLKGELRASDVPDLSQSATLNGCNLLDNNLEKI
        MEEAKEILK+NRIEDI+WLCSLSESELD LISIKMLVLQRAKVIGH+DLAEKFDLKTLRA+GF+LMEHLKG+L  S VPD SQ + LNG NLLD++LEKI
Subjt:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDLAEKFDLKTLRAIGFVLMEHLKGELRASDVPDLSQSATLNGCNLLDNNLEKI

Query:  LSIDEIMESICSDRRKKPGKR
        LSID+IM SICS+RRKKPGKR
Subjt:  LSIDEIMESICSDRRKKPGKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G80245.1 Spc97 / Spc98 family of spindle pole body (SBP) component2.6e-2849.19Show/hide
Query:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDLAEKFDLKTLRAIGFVLMEHLKGELR--ASDVPD-LSQSATLNGCNLLDNNL
        MEE  +ILKNNR +D+ W CSLSESELD+LIS+K L +QRAK+ GH++LA+KFDLK LR++G VLMEH +  ++   S  P  + Q   L+ CNLL  ++
Subjt:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDLAEKFDLKTLRAIGFVLMEHLKGELR--ASDVPD-LSQSATLNGCNLLDNNL

Query:  EKILSIDEIMESICSDRRKKPGKR
        +  + I+EI+  IC ++ KK  ++
Subjt:  EKILSIDEIMESICSDRRKKPGKR

AT1G80245.2 Spc97 / Spc98 family of spindle pole body (SBP) component2.6e-2849.19Show/hide
Query:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDLAEKFDLKTLRAIGFVLMEHLKGELR--ASDVPD-LSQSATLNGCNLLDNNL
        MEE  +ILKNNR +D+ W CSLSESELD+LIS+K L +QRAK+ GH++LA+KFDLK LR++G VLMEH +  ++   S  P  + Q   L+ CNLL  ++
Subjt:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDLAEKFDLKTLRAIGFVLMEHLKGELR--ASDVPD-LSQSATLNGCNLLDNNL

Query:  EKILSIDEIMESICSDRRKKPGKR
        +  + I+EI+  IC ++ KK  ++
Subjt:  EKILSIDEIMESICSDRRKKPGKR

AT1G80245.3 Spc97 / Spc98 family of spindle pole body (SBP) component2.6e-2849.19Show/hide
Query:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDLAEKFDLKTLRAIGFVLMEHLKGELR--ASDVPD-LSQSATLNGCNLLDNNL
        MEE  +ILKNNR +D+ W CSLSESELD+LIS+K L +QRAK+ GH++LA+KFDLK LR++G VLMEH +  ++   S  P  + Q   L+ CNLL  ++
Subjt:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDLAEKFDLKTLRAIGFVLMEHLKGELR--ASDVPD-LSQSATLNGCNLLDNNL

Query:  EKILSIDEIMESICSDRRKKPGKR
        +  + I+EI+  IC ++ KK  ++
Subjt:  EKILSIDEIMESICSDRRKKPGKR

AT4G00695.1 FUNCTIONS IN: molecular_function unknown7.1e-2648.44Show/hide
Query:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDL-AEKFDLKTLRAIGFVLMEHLKGELR--ASDVPDLSQS-ATLNGCNLLDNN
        MEE  +ILKNNR +D+ W CSLSESELD+LIS+K LV++RAKV G +DL A+KFDLK LR++G VLME+++  +    S  P + Q  + L+ CNLL  +
Subjt:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDL-AEKFDLKTLRAIGFVLMEHLKGELR--ASDVPDLSQS-ATLNGCNLLDNN

Query:  LEKILSIDEIMESICSDRRKKPGKRLVR
        ++  + I+EI+  IC+ + KK  ++  R
Subjt:  LEKILSIDEIMESICSDRRKKPGKRLVR

AT4G00695.2 FUNCTIONS IN: molecular_function unknown7.1e-2648.44Show/hide
Query:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDL-AEKFDLKTLRAIGFVLMEHLKGELR--ASDVPDLSQS-ATLNGCNLLDNN
        MEE  +ILKNNR +D+ W CSLSESELD+LIS+K LV++RAKV G +DL A+KFDLK LR++G VLME+++  +    S  P + Q  + L+ CNLL  +
Subjt:  MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDL-AEKFDLKTLRAIGFVLMEHLKGELR--ASDVPDLSQS-ATLNGCNLLDNN

Query:  LEKILSIDEIMESICSDRRKKPGKRLVR
        ++  + I+EI+  IC+ + KK  ++  R
Subjt:  LEKILSIDEIMESICSDRRKKPGKRLVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGGCGAAAGAAATTTTGAAGAATAACAGAATTGAAGATATCAATTGGCTTTGTTCACTATCTGAATCAGAACTTGACATGCTGATTAGCATTAAAATGCTAGT
TCTCCAACGTGCAAAAGTAATTGGTCATAAAGATTTAGCTGAGAAATTTGATTTGAAGACGCTACGTGCTATTGGGTTTGTTTTGATGGAACATCTTAAAGGAGAACTTA
GGGCGTCAGATGTTCCGGACCTGTCTCAATCTGCTACCTTAAATGGGTGCAACTTATTAGACAACAATCTTGAGAAAATTTTGTCAATTGATGAGATAATGGAAAGTATC
TGCTCAGACAGAAGGAAGAAACCTGGAAAAAGGTTGGTACGATCTACAAGTAGCTGTTATTGTATTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAGGCGAAAGAAATTTTGAAGAATAACAGAATTGAAGATATCAATTGGCTTTGTTCACTATCTGAATCAGAACTTGACATGCTGATTAGCATTAAAATGCTAGT
TCTCCAACGTGCAAAAGTAATTGGTCATAAAGATTTAGCTGAGAAATTTGATTTGAAGACGCTACGTGCTATTGGGTTTGTTTTGATGGAACATCTTAAAGGAGAACTTA
GGGCGTCAGATGTTCCGGACCTGTCTCAATCTGCTACCTTAAATGGGTGCAACTTATTAGACAACAATCTTGAGAAAATTTTGTCAATTGATGAGATAATGGAAAGTATC
TGCTCAGACAGAAGGAAGAAACCTGGAAAAAGGTTGGTACGATCTACAAGTAGCTGTTATTGTATTGTTTGA
Protein sequenceShow/hide protein sequence
MEEAKEILKNNRIEDINWLCSLSESELDMLISIKMLVLQRAKVIGHKDLAEKFDLKTLRAIGFVLMEHLKGELRASDVPDLSQSATLNGCNLLDNNLEKILSIDEIMESI
CSDRRKKPGKRLVRSTSSCYCIV