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HG10012176 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10012176
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description50S ribosomal protein L35
Genome locationChr01:18407645..18412119
RNA-Seq ExpressionHG10012176
SyntenyHG10012176
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0068151.1 50S ribosomal protein L35 [Cucumis melo var. makuwa]1.1e-0669.05Show/hide
Query:  SYKSRFWMMKDGSIKRRMEGKRHNAHSKVGRISFYAKVTFTW
        SYKSRFW+MKDGSIKRRMEGKRHNAHSK+  + +     F W
Subjt:  SYKSRFWMMKDGSIKRRMEGKRHNAHSKVGRISFYAKVTFTW
XP_004144409.1 uncharacterized protein LOC101219338 [Cucumis sativus]4.0e-0690.32Show/hide
Query:  SYKSRFWMMKDGSIKRRMEGKRHNAHSKVGR
        SYKSRFW+MKDGSIKRRMEGKRHNAHSK  R
Subjt:  SYKSRFWMMKDGSIKRRMEGKRHNAHSKVGR
XP_008460439.1 PREDICTED: uncharacterized protein LOC103499252 [Cucumis melo]4.0e-0690.32Show/hide
Query:  SYKSRFWMMKDGSIKRRMEGKRHNAHSKVGR
        SYKSRFW+MKDGSIKRRMEGKRHNAHSK  R
Subjt:  SYKSRFWMMKDGSIKRRMEGKRHNAHSKVGR
XP_022156090.1 uncharacterized protein LOC111023059 [Momordica charantia]5.8e-0592.86Show/hide
Query:  SYKSRFWMMKDGSIKRRMEGKRHNAHSK
        SYKSRFWMMKDGSIKRR EGKRHNAH K
Subjt:  SYKSRFWMMKDGSIKRRMEGKRHNAHSK
XP_038887770.1 uncharacterized protein LOC120077803 [Benincasa hispida]1.8e-0693.55Show/hide
Query:  SYKSRFWMMKDGSIKRRMEGKRHNAHSKVGR
        SYKSRFWMMKDGSIKRRMEGKRHNAHSK  R
Subjt:  SYKSRFWMMKDGSIKRRMEGKRHNAHSKVGR
TrEMBL top hitse value%identityAlignment
A0A0A0LBT5 Uncharacterized protein1.9e-0690.32Show/hide
Query:  SYKSRFWMMKDGSIKRRMEGKRHNAHSKVGR
        SYKSRFW+MKDGSIKRRMEGKRHNAHSK  R
Subjt:  SYKSRFWMMKDGSIKRRMEGKRHNAHSKVGR
A0A1S3CDR4 uncharacterized protein LOC1034992521.9e-0690.32Show/hide
Query:  SYKSRFWMMKDGSIKRRMEGKRHNAHSKVGR
        SYKSRFW+MKDGSIKRRMEGKRHNAHSK  R
Subjt:  SYKSRFWMMKDGSIKRRMEGKRHNAHSKVGR
A0A5A7VRB4 50S ribosomal protein L355.1e-0769.05Show/hide
Query:  SYKSRFWMMKDGSIKRRMEGKRHNAHSKVGRISFYAKVTFTW
        SYKSRFW+MKDGSIKRRMEGKRHNAHSK+  + +     F W
Subjt:  SYKSRFWMMKDGSIKRRMEGKRHNAHSKVGRISFYAKVTFTW
A0A6J1DPB8 uncharacterized protein LOC1110230592.8e-0592.86Show/hide
Query:  SYKSRFWMMKDGSIKRRMEGKRHNAHSK
        SYKSRFWMMKDGSIKRR EGKRHNAH K
Subjt:  SYKSRFWMMKDGSIKRRMEGKRHNAHSK
A0A6J1KAA4 uncharacterized protein LOC1114915304.1e-0485.71Show/hide
Query:  SYKSRFWMMKDGSIKRRMEGKRHNAHSK
        SYKSRFW+ KDGSIKRR EGKRHNAH K
Subjt:  SYKSRFWMMKDGSIKRRMEGKRHNAHSK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCTCTGCAGACTCATTCTCCACTTGCGGCTTATCAGTGTATTCGGTCTTCGCCCTTGCCTCTCTCTATCTTACAAGTCTAGGTTTTGGATGATGAAGGATGGGAG
CATTAAACGTCGAATGGAAGGGAAAAGGCACAATGCACATTCCAAGGTGGGAAGGATTTCGTTTTATGCAAAAGTTACATTCACTTGGGGCCTCCTTGAAATAGGCCTTG
AAATCTTGGAATGTATGGGGATATTAGGATCAAGAAGCAGGAAGGTTCCAAAGCAGCAAGAGATCTTGAGGAAGGTTAAGTTTCTAGATAGGCTTGAAAAGGAGGCCTCT
CTTGCAGAGGTTTTCGAAGATGAGCGAGCCTATCTAAAGGCAGAATTTGGAGAGTTTGTTACTAAAGGGGTGACAAGTTGGAGGCAAAGGGCCAGAGTGAGGTGGGTAGG
AAGAATTGTTAGTGGATTGTGGAAGGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCATCTCTGCAGACTCATTCTCCACTTGCGGCTTATCAGTGTATTCGGTCTTCGCCCTTGCCTCTCTCTATCTTACAAGTCTAGGTTTTGGATGATGAAGGATGGGAG
CATTAAACGTCGAATGGAAGGGAAAAGGCACAATGCACATTCCAAGGTGGGAAGGATTTCGTTTTATGCAAAAGTTACATTCACTTGGGGCCTCCTTGAAATAGGCCTTG
AAATCTTGGAATGTATGGGGATATTAGGATCAAGAAGCAGGAAGGTTCCAAAGCAGCAAGAGATCTTGAGGAAGGTTAAGTTTCTAGATAGGCTTGAAAAGGAGGCCTCT
CTTGCAGAGGTTTTCGAAGATGAGCGAGCCTATCTAAAGGCAGAATTTGGAGAGTTTGTTACTAAAGGGGTGACAAGTTGGAGGCAAAGGGCCAGAGTGAGGTGGGTAGG
AAGAATTGTTAGTGGATTGTGGAAGGAGTAA
Protein sequenceShow/hide protein sequence
MHLCRLILHLRLISVFGLRPCLSLSYKSRFWMMKDGSIKRRMEGKRHNAHSKVGRISFYAKVTFTWGLLEIGLEILECMGILGSRSRKVPKQQEILRKVKFLDRLEKEAS
LAEVFEDERAYLKAEFGEFVTKGVTSWRQRARVRWVGRIVSGLWKE