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HG10012199 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10012199
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionLysine-specific demethylase JMJ706-like protein
Genome locationChr01:18720304..18720648
RNA-Seq ExpressionHG10012199
SyntenyHG10012199
Gene Ontology termsGO:0010468 - regulation of gene expression (biological process)
GO:0032259 - methylation (biological process)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038556.1 lysine-specific demethylase JMJ706-like protein [Cucumis melo var. makuwa]1.1e-2491.04Show/hide
Query:  MSSVCCKADKSSSKVFPTSKDGVFVDRSNRTTIPISIKLKRFSIEEAGSRQQLERHRKEVFWHEQGR
        MSSVCCKADKSSSKVFPTSKD +FVDRS +TTIPISIKLKRFSIEEA SRQQLERHRKEVFWHEQG+
Subjt:  MSSVCCKADKSSSKVFPTSKDGVFVDRSNRTTIPISIKLKRFSIEEAGSRQQLERHRKEVFWHEQGR

XP_038888620.1 lysine-specific demethylase JMJ706-like isoform X1 [Benincasa hispida]2.2e-2587.5Show/hide
Query:  MSSVCCKADKSSSKVFPTSKDGVFVDRSNRTTIPISIKLKRFSIEEAGSRQQLERHRKEVFWHEQGR--PYH
        MSSVCCKADKSSSKVFPTSKD +FV+RSNRTTIPISIKLKRFSIEEA +RQQLERHRKEVFWHEQG+  P+H
Subjt:  MSSVCCKADKSSSKVFPTSKDGVFVDRSNRTTIPISIKLKRFSIEEAGSRQQLERHRKEVFWHEQGR--PYH

XP_038888623.1 lysine-specific demethylase JMJ706-like isoform X2 [Benincasa hispida]2.2e-2587.5Show/hide
Query:  MSSVCCKADKSSSKVFPTSKDGVFVDRSNRTTIPISIKLKRFSIEEAGSRQQLERHRKEVFWHEQGR--PYH
        MSSVCCKADKSSSKVFPTSKD +FV+RSNRTTIPISIKLKRFSIEEA +RQQLERHRKEVFWHEQG+  P+H
Subjt:  MSSVCCKADKSSSKVFPTSKDGVFVDRSNRTTIPISIKLKRFSIEEAGSRQQLERHRKEVFWHEQGR--PYH

XP_038888624.1 lysine-specific demethylase JMJ706-like isoform X3 [Benincasa hispida]2.2e-2587.5Show/hide
Query:  MSSVCCKADKSSSKVFPTSKDGVFVDRSNRTTIPISIKLKRFSIEEAGSRQQLERHRKEVFWHEQGR--PYH
        MSSVCCKADKSSSKVFPTSKD +FV+RSNRTTIPISIKLKRFSIEEA +RQQLERHRKEVFWHEQG+  P+H
Subjt:  MSSVCCKADKSSSKVFPTSKDGVFVDRSNRTTIPISIKLKRFSIEEAGSRQQLERHRKEVFWHEQGR--PYH

XP_038888625.1 lysine-specific demethylase JMJ706-like isoform X4 [Benincasa hispida]2.2e-2587.5Show/hide
Query:  MSSVCCKADKSSSKVFPTSKDGVFVDRSNRTTIPISIKLKRFSIEEAGSRQQLERHRKEVFWHEQGR--PYH
        MSSVCCKADKSSSKVFPTSKD +FV+RSNRTTIPISIKLKRFSIEEA +RQQLERHRKEVFWHEQG+  P+H
Subjt:  MSSVCCKADKSSSKVFPTSKDGVFVDRSNRTTIPISIKLKRFSIEEAGSRQQLERHRKEVFWHEQGR--PYH

TrEMBL top hitse value%identityAlignment
A0A0A0LHZ2 Uncharacterized protein8.9e-2589.55Show/hide
Query:  MSSVCCKADKSSSKVFPTSKDGVFVDRSNRTTIPISIKLKRFSIEEAGSRQQLERHRKEVFWHEQGR
        MSSVCCKADKSSSKVFPTSKD +FVDRS +TTIPISIKLKRFSIEEA SRQQ+ERHRKEVFWHEQG+
Subjt:  MSSVCCKADKSSSKVFPTSKDGVFVDRSNRTTIPISIKLKRFSIEEAGSRQQLERHRKEVFWHEQGR

A0A1S4E5H7 LOW QUALITY PROTEIN: lysine-specific demethylase JMJ706-like5.2e-2591.04Show/hide
Query:  MSSVCCKADKSSSKVFPTSKDGVFVDRSNRTTIPISIKLKRFSIEEAGSRQQLERHRKEVFWHEQGR
        MSSVCCKADKSSSKVFPTSKD +FVDRS +TTIPISIKLKRFSIEEA SRQQLERHRKEVFWHEQG+
Subjt:  MSSVCCKADKSSSKVFPTSKDGVFVDRSNRTTIPISIKLKRFSIEEAGSRQQLERHRKEVFWHEQGR

A0A5A7T8M7 Lysine-specific demethylase JMJ706-like protein5.2e-2591.04Show/hide
Query:  MSSVCCKADKSSSKVFPTSKDGVFVDRSNRTTIPISIKLKRFSIEEAGSRQQLERHRKEVFWHEQGR
        MSSVCCKADKSSSKVFPTSKD +FVDRS +TTIPISIKLKRFSIEEA SRQQLERHRKEVFWHEQG+
Subjt:  MSSVCCKADKSSSKVFPTSKDGVFVDRSNRTTIPISIKLKRFSIEEAGSRQQLERHRKEVFWHEQGR

A0A5D3E5V1 Lysine-specific demethylase JMJ706-like protein5.2e-2591.04Show/hide
Query:  MSSVCCKADKSSSKVFPTSKDGVFVDRSNRTTIPISIKLKRFSIEEAGSRQQLERHRKEVFWHEQGR
        MSSVCCKADKSSSKVFPTSKD +FVDRS +TTIPISIKLKRFSIEEA SRQQLERHRKEVFWHEQG+
Subjt:  MSSVCCKADKSSSKVFPTSKDGVFVDRSNRTTIPISIKLKRFSIEEAGSRQQLERHRKEVFWHEQGR

A0A6J1HJ55 lysine-specific demethylase JMJ706-like isoform X14.4e-2482.19Show/hide
Query:  MSSVCCKADKSSSKVFPTSKDGVFVDRSNRTTIPISIKLKRFSIEEAGSRQQLERHRKEVFWHEQGRPYHTNL
        MSSVCCKADKS SKVFPTSKD VFVDRS+RTTIPIS+KLKRFSI E GSRQQLERH KE+FWHEQG+  H  L
Subjt:  MSSVCCKADKSSSKVFPTSKDGVFVDRSNRTTIPISIKLKRFSIEEAGSRQQLERHRKEVFWHEQGRPYHTNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATCAGTTTGTTGTAAAGCTGACAAGTCAAGTTCCAAAGTGTTTCCTACTAGTAAAGATGGTGTCTTTGTAGATAGATCTAACAGAACAACCATTCCCATCTCTAT
AAAGTTAAAAAGATTCAGCATTGAGGAAGCAGGGAGCAGACAACAACTTGAGCGCCACAGGAAAGAAGTGTTCTGGCATGAACAGGGAAGGCCTTACCACACCAACCTCC
TCTCCCTGCTGCTGAGTGTGGGCCAAAGCGCCTTAAAATCAGAGGTCCATCATCATACCTGGGGTCTCACCACAGGTTGCATTGAAGCTTTTGGTTACAAAGCTAGTGTC
CAGCTATCAGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCATCAGTTTGTTGTAAAGCTGACAAGTCAAGTTCCAAAGTGTTTCCTACTAGTAAAGATGGTGTCTTTGTAGATAGATCTAACAGAACAACCATTCCCATCTCTAT
AAAGTTAAAAAGATTCAGCATTGAGGAAGCAGGGAGCAGACAACAACTTGAGCGCCACAGGAAAGAAGTGTTCTGGCATGAACAGGGAAGGCCTTACCACACCAACCTCC
TCTCCCTGCTGCTGAGTGTGGGCCAAAGCGCCTTAAAATCAGAGGTCCATCATCATACCTGGGGTCTCACCACAGGTTGCATTGAAGCTTTTGGTTACAAAGCTAGTGTC
CAGCTATCAGGTTAG
Protein sequenceShow/hide protein sequence
MSSVCCKADKSSSKVFPTSKDGVFVDRSNRTTIPISIKLKRFSIEEAGSRQQLERHRKEVFWHEQGRPYHTNLLSLLLSVGQSALKSEVHHHTWGLTTGCIEAFGYKASV
QLSG