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HG10012231 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10012231
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr01:19145890..19146216
RNA-Seq ExpressionHG10012231
SyntenyHG10012231
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038574.1 uncharacterized protein E6C27_scaffold92G001040 [Cucumis melo var. makuwa]3.1e-4283.78Show/hide
Query:  MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPPSYESIKIDDDISSSS-HKKAKTRRIHS-DCSGNEPRLVRSSGMRRDWSFEDLG
        MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTP  +  IK+D+DISSS  HKK ++RR  S D  GNEPRLVRSSGMRRDWSFEDLG
Subjt:  MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPPSYESIKIDDDISSSS-HKKAKTRRIHS-DCSGNEPRLVRSSGMRRDWSFEDLG

Query:  LRD-QKKGRFH
        LRD QKKGRFH
Subjt:  LRD-QKKGRFH

KGN60385.1 hypothetical protein Csa_002007 [Cucumis sativus]2.2e-4383.93Show/hide
Query:  MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAEL-TPPSYESIKIDDD--ISSSS-HKKAKTRRIHSDCSGNEPRLVRSSGMRRDWSFED
        MNCLTCQALPRTQSDRE N GYETPS+RGKSCCLYVPRRWS EL TP SY+SIKIDDD  ISSS+ HKKA+TRR+ S+C GNEP+LVRSSGMRRDWSFED
Subjt:  MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAEL-TPPSYESIKIDDD--ISSSS-HKKAKTRRIHSDCSGNEPRLVRSSGMRRDWSFED

Query:  LGLRDQKKGRFH
        LGLR QKKGRFH
Subjt:  LGLRDQKKGRFH

XP_008465978.2 PREDICTED: uncharacterized protein LOC103503546 [Cucumis melo]3.1e-4283.78Show/hide
Query:  MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPPSYESIKIDDDISSSS-HKKAKTRRIHS-DCSGNEPRLVRSSGMRRDWSFEDLG
        MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTP  +  IK+D+DISSS  HKK ++RR  S D  GNEPRLVRSSGMRRDWSFEDLG
Subjt:  MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPPSYESIKIDDDISSSS-HKKAKTRRIHS-DCSGNEPRLVRSSGMRRDWSFEDLG

Query:  LRD-QKKGRFH
        LRD QKKGRFH
Subjt:  LRD-QKKGRFH

XP_031737602.1 uncharacterized protein LOC116402474 [Cucumis sativus]2.2e-4383.93Show/hide
Query:  MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAEL-TPPSYESIKIDDD--ISSSS-HKKAKTRRIHSDCSGNEPRLVRSSGMRRDWSFED
        MNCLTCQALPRTQSDRE N GYETPS+RGKSCCLYVPRRWS EL TP SY+SIKIDDD  ISSS+ HKKA+TRR+ S+C GNEP+LVRSSGMRRDWSFED
Subjt:  MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAEL-TPPSYESIKIDDD--ISSSS-HKKAKTRRIHSDCSGNEPRLVRSSGMRRDWSFED

Query:  LGLRDQKKGRFH
        LGLR QKKGRFH
Subjt:  LGLRDQKKGRFH

XP_038887010.1 uncharacterized protein LOC120077178 [Benincasa hispida]4.2e-4789.81Show/hide
Query:  MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPPSYESIKIDDDISSSSHKKAKTRRIHSDCSGNEPRLVRSSGMRRDWSFEDLGLR
        MNCLTCQALPRTQSDRE NHGYET SSRGKSCCLYV RRWSAELTPPSYESIK DDDISSS  KKAK RR+HSDC  NEPRLVRSSGMRRDWSFEDLGLR
Subjt:  MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPPSYESIKIDDDISSSSHKKAKTRRIHSDCSGNEPRLVRSSGMRRDWSFEDLGLR

Query:  DQKKGRFH
        DQKK RFH
Subjt:  DQKKGRFH

TrEMBL top hitse value%identityAlignment
A0A0A0LEC0 Uncharacterized protein1.1e-4383.93Show/hide
Query:  MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAEL-TPPSYESIKIDDD--ISSSS-HKKAKTRRIHSDCSGNEPRLVRSSGMRRDWSFED
        MNCLTCQALPRTQSDRE N GYETPS+RGKSCCLYVPRRWS EL TP SY+SIKIDDD  ISSS+ HKKA+TRR+ S+C GNEP+LVRSSGMRRDWSFED
Subjt:  MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAEL-TPPSYESIKIDDD--ISSSS-HKKAKTRRIHSDCSGNEPRLVRSSGMRRDWSFED

Query:  LGLRDQKKGRFH
        LGLR QKKGRFH
Subjt:  LGLRDQKKGRFH

A0A1S3CRL3 uncharacterized protein LOC1035035461.5e-4283.78Show/hide
Query:  MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPPSYESIKIDDDISSSS-HKKAKTRRIHS-DCSGNEPRLVRSSGMRRDWSFEDLG
        MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTP  +  IK+D+DISSS  HKK ++RR  S D  GNEPRLVRSSGMRRDWSFEDLG
Subjt:  MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPPSYESIKIDDDISSSS-HKKAKTRRIHS-DCSGNEPRLVRSSGMRRDWSFEDLG

Query:  LRD-QKKGRFH
        LRD QKKGRFH
Subjt:  LRD-QKKGRFH

A0A5A7T546 Uncharacterized protein1.5e-4283.78Show/hide
Query:  MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPPSYESIKIDDDISSSS-HKKAKTRRIHS-DCSGNEPRLVRSSGMRRDWSFEDLG
        MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTP  +  IK+D+DISSS  HKK ++RR  S D  GNEPRLVRSSGMRRDWSFEDLG
Subjt:  MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPPSYESIKIDDDISSSS-HKKAKTRRIHS-DCSGNEPRLVRSSGMRRDWSFEDLG

Query:  LRD-QKKGRFH
        LRD QKKGRFH
Subjt:  LRD-QKKGRFH

A0A5D3E5T4 Uncharacterized protein1.5e-4283.78Show/hide
Query:  MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPPSYESIKIDDDISSSS-HKKAKTRRIHS-DCSGNEPRLVRSSGMRRDWSFEDLG
        MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTP  +  IK+D+DISSS  HKK ++RR  S D  GNEPRLVRSSGMRRDWSFEDLG
Subjt:  MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPPSYESIKIDDDISSSS-HKKAKTRRIHS-DCSGNEPRLVRSSGMRRDWSFEDLG

Query:  LRD-QKKGRFH
        LRD QKKGRFH
Subjt:  LRD-QKKGRFH

A0A6J1DZN2 uncharacterized protein LOC1110260673.5e-3166.4Show/hide
Query:  MNCLTCQALPRTQSDRENN----HGYETPSS--RGKSCCLYVPRRWSAELTPPSYESIKIDDDIS--------SSSHKKAKTRRIHSDCSG---NEPRLV
        MNCLTCQALPRTQSDRENN    + YET SS  RGKSCCL+V RRWSAELTP SY  IK   D +        S S KK K R + S       NEPRLV
Subjt:  MNCLTCQALPRTQSDRENN----HGYETPSS--RGKSCCLYVPRRWSAELTPPSYESIKIDDDIS--------SSSHKKAKTRRIHSDCSG---NEPRLV

Query:  RSSGMRRDWSFEDLGLRDQKKGRFH
        RSSGMRRDWSFEDL LRDQKKGRFH
Subjt:  RSSGMRRDWSFEDLGLRDQKKGRFH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35215.1 unknown protein1.1e-0531.96Show/hide
Query:  MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPPSYESIKIDDDISSSSHKKAKTRRIHSDCSGNEPRLVRSSGMRRDWSFEDL
        +NCL C  L RT SDR+     ++      +   +       E    +  S+ +   + +  H++  +  I      +EP+LVRSSG+RRDWSFEDL
Subjt:  MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPPSYESIKIDDDISSSSHKKAKTRRIHSDCSGNEPRLVRSSGMRRDWSFEDL

AT5G46770.1 unknown protein7.3e-1338.76Show/hide
Query:  MNCLTCQALPRTQSDRENNHG------YETPSSRGKSCCL--YVPRRWSAELTPPSYESIKIDDDISSSSHKKAKTRRIHS-DCSG-------------N
        +NCL+CQALPRT S+++ +         E  +  GK+CC+     R WS  L+P  YE  KI    SS +HK  K ++IH    SG              
Subjt:  MNCLTCQALPRTQSDRENNHG------YETPSSRGKSCCL--YVPRRWSAELTPPSYESIKIDDDISSSSHKKAKTRRIHS-DCSG-------------N

Query:  EPRLVRSSGMRRDWSFEDL---GLRDQKK
        +P+LVRS+G+RR+WSFE+L   GL ++K+
Subjt:  EPRLVRSSGMRRDWSFEDL---GLRDQKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTGCCTAACATGCCAAGCCCTTCCAAGGACCCAATCTGATAGGGAGAATAATCATGGTTATGAAACCCCCTCTAGTAGAGGCAAATCATGTTGCCTATACGTCCC
GCGGAGGTGGTCGGCCGAATTGACTCCCCCGTCGTACGAGTCGATTAAAATCGACGACGATATTAGCTCTTCTTCGCACAAGAAGGCCAAGACTCGCCGCATTCATAGTG
ACTGTAGCGGGAACGAGCCGAGGTTGGTGAGGAGCTCGGGGATGAGAAGGGATTGGAGCTTTGAGGATTTGGGATTGAGAGATCAAAAGAAAGGGAGATTCCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTGCCTAACATGCCAAGCCCTTCCAAGGACCCAATCTGATAGGGAGAATAATCATGGTTATGAAACCCCCTCTAGTAGAGGCAAATCATGTTGCCTATACGTCCC
GCGGAGGTGGTCGGCCGAATTGACTCCCCCGTCGTACGAGTCGATTAAAATCGACGACGATATTAGCTCTTCTTCGCACAAGAAGGCCAAGACTCGCCGCATTCATAGTG
ACTGTAGCGGGAACGAGCCGAGGTTGGTGAGGAGCTCGGGGATGAGAAGGGATTGGAGCTTTGAGGATTTGGGATTGAGAGATCAAAAGAAAGGGAGATTCCATTGA
Protein sequenceShow/hide protein sequence
MNCLTCQALPRTQSDRENNHGYETPSSRGKSCCLYVPRRWSAELTPPSYESIKIDDDISSSSHKKAKTRRIHSDCSGNEPRLVRSSGMRRDWSFEDLGLRDQKKGRFH