CuGenDBv2

Gene ID	HG10012232
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	FAM50A-like protein
Genome location	Chr01:19154788..19155306
RNA-Seq Expression	HG10012232
Synteny	HG10012232
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KGN60386.1 hypothetical protein Csa_000782 [Cucumis sativus]

8.2e-69

84.21

Show/hide

Query:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN
        ME+VQNQHV           MDQ+KDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAST KQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN
Subjt:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN

Query:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLEKPSHSEPPTERLISKTAKKVLGRRNWKADARKK
        ISRG+EE SCNSSNMAA+TSTSESQLQC+ SNVDPQLE PSHS+ P E+L+S+TAKKV GRRNWKADARKK
Subjt:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLEKPSHSEPPTERLISKTAKKVLGRRNWKADARKK

XP_022155993.1 uncharacterized protein LOC111022965 [Momordica charantia]

8.2e-69

84.21

Show/hide

Query:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN
        MENVQN+ V ET+ SFPMK +DQ KD RIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQP QTGTYFQPNGIANNPLTRVHC+RNWKK+ARS +
Subjt:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN

Query:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLEKPSHSEPPTERLISKTAKKVLGRRNWKADARKK
        +SRGL EASCNSSNMAARTSTSESQ+QC+ SN +PQLE  SH EPP E+LIS+TAKKVLGRRNWKADARKK
Subjt:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLEKPSHSEPPTERLISKTAKKVLGRRNWKADARKK

XP_022963572.1 uncharacterized protein LOC111463869 [Cucurbita moschata]

1.1e-68

83.04

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Query:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN
        ME VQN+HVAE ESSFPMK  DQEK  RIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAST+K P QTGTYFQPNG+ANNPLTRVHCSRNWKKEAR+A+
Subjt:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN

Query:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLEKPSHSEPPTERLISKTAKKVLGRRNWKADARKK
        +SRGLEEASCNSSNMAA++STSE Q+QC  S+ +PQ E  SHSEPPTE+L+S+TAKKVLGRRNWKADARKK
Subjt:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLEKPSHSEPPTERLISKTAKKVLGRRNWKADARKK

XP_022967395.1 uncharacterized protein LOC111466937 [Cucurbita maxima]

2.8e-69

83.63

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Query:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN
        ME VQN+HVAE ESSFPMK  DQEK  RIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAST+K P QTGTYFQPNG+ANNPLTRVHCSRNWKKEAR+A+
Subjt:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN

Query:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLEKPSHSEPPTERLISKTAKKVLGRRNWKADARKK
        +SRGLEEASCNSSNMAA++STSE Q+QC  SN +PQ E  SHSEPPTE+L+S+TAKKVLGRRNWKADARKK
Subjt:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLEKPSHSEPPTERLISKTAKKVLGRRNWKADARKK

XP_038886879.1 uncharacterized protein LOC120077088 [Benincasa hispida]

2.4e-76

91.86

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Query:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN
        MENVQNQHVA TE SFPMK M+QEKDNRI+NDIMTRRLKNRERQRRYRARKRLEEEI+KAST+KQPIQTGTYFQPNG  NNPL+RVHCSRNWKKEARSAN
Subjt:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN

Query:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLEKPSHSEPPTERLISKTAKKVLGRRNWKADARKKN
        ISRGLEEASCNSSNMAARTSTSESQLQCI SNVDPQLE PSHSEPPTE LIS+TAKKVLGRRNWKADARKKN
Subjt:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLEKPSHSEPPTERLISKTAKKVLGRRNWKADARKKN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LK46 Uncharacterized protein

4.0e-69

84.21

Show/hide

Query:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN
        ME+VQNQHV           MDQ+KDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAST KQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN
Subjt:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN

Query:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLEKPSHSEPPTERLISKTAKKVLGRRNWKADARKK
        ISRG+EE SCNSSNMAA+TSTSESQLQC+ SNVDPQLE PSHS+ P E+L+S+TAKKV GRRNWKADARKK
Subjt:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLEKPSHSEPPTERLISKTAKKVLGRRNWKADARKK

A0A1S3CQ53 uncharacterized protein LOC103503545

4.4e-68

83.63

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Query:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN
        ME+VQNQHV           MDQ+K NRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAS  KQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN
Subjt:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN

Query:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLEKPSHSEPPTERLISKTAKKVLGRRNWKADARKK
        ISRG+EEASCNSSNMAARTSTSESQLQC+ SNVDPQLE PSHS+ P ++L+S+TAKKV GRRNWKADARKK
Subjt:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLEKPSHSEPPTERLISKTAKKVLGRRNWKADARKK

A0A6J1DPD8 uncharacterized protein LOC111022965

4.0e-69

84.21

Show/hide

Query:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN
        MENVQN+ V ET+ SFPMK +DQ KD RIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQP QTGTYFQPNGIANNPLTRVHC+RNWKK+ARS +
Subjt:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN

Query:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLEKPSHSEPPTERLISKTAKKVLGRRNWKADARKK
        +SRGL EASCNSSNMAARTSTSESQ+QC+ SN +PQLE  SH EPP E+LIS+TAKKVLGRRNWKADARKK
Subjt:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLEKPSHSEPPTERLISKTAKKVLGRRNWKADARKK

A0A6J1HFL3 uncharacterized protein LOC111463869

5.2e-69

83.04

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Query:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN
        ME VQN+HVAE ESSFPMK  DQEK  RIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAST+K P QTGTYFQPNG+ANNPLTRVHCSRNWKKEAR+A+
Subjt:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN

Query:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLEKPSHSEPPTERLISKTAKKVLGRRNWKADARKK
        +SRGLEEASCNSSNMAA++STSE Q+QC  S+ +PQ E  SHSEPPTE+L+S+TAKKVLGRRNWKADARKK
Subjt:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLEKPSHSEPPTERLISKTAKKVLGRRNWKADARKK

A0A6J1HUC8 uncharacterized protein LOC111466937

1.4e-69

83.63

Show/hide

Query:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN
        ME VQN+HVAE ESSFPMK  DQEK  RIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAST+K P QTGTYFQPNG+ANNPLTRVHCSRNWKKEAR+A+
Subjt:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN

Query:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLEKPSHSEPPTERLISKTAKKVLGRRNWKADARKK
        +SRGLEEASCNSSNMAA++STSE Q+QC  SN +PQ E  SHSEPPTE+L+S+TAKKVLGRRNWKADARKK
Subjt:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLEKPSHSEPPTERLISKTAKKVLGRRNWKADARKK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G32630.1 unknown protein

3.2e-10

42.72

Show/hide

Query:  EKDNRIDND-IMTRRLKNRERQRRYRARKRLEEE------------IKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN-ISRGLEEAS
        EK+  ID D +M RR+KNRERQRRYRARKR+ EE            + K    ++  +   +  P+G   N + RV+C RNWKKEAR A+ I    +++S
Subjt:  EKDNRIDND-IMTRRLKNRERQRRYRARKRLEEE------------IKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN-ISRGLEEAS

Query:  CNS
        C S
Subjt:  CNS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAAAATGTGCAAAATCAGCATGTTGCTGAAACAGAAAGTAGTTTTCCGATGAAGCGCATGGATCAAGAAAAAGACAATAGAATAGACAATGATATCATGACTCGTCG
ACTGAAGAATCGAGAAAGGCAACGCAGATATAGAGCCCGGAAACGTCTAGAAGAAGAAATAAAGAAAGCTTCAACTGTAAAACAACCAATTCAGACAGGAACATATTTTC
AACCAAATGGCATTGCAAACAATCCCTTGACTCGGGTGCATTGTAGCCGAAATTGGAAGAAGGAAGCAAGAAGTGCCAATATATCTAGGGGGTTAGAAGAAGCCTCTTGT
AATAGTTCCAATATGGCTGCAAGAACATCAACCAGTGAGAGTCAACTGCAATGCATACTCTCTAACGTCGATCCACAATTAGAAAAGCCATCACACTCGGAGCCACCTAC
TGAACGACTCATCTCTAAAACAGCCAAAAAGGTGCTTGGTCGAAGAAATTGGAAAGCAGATGCGAGAAAGAAGAATTGA

mRNA sequence

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Protein sequence

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MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSANISRGLEEASC
NSSNMAARTSTSESQLQCILSNVDPQLEKPSHSEPPTERLISKTAKKVLGRRNWKADARKKN

HG10012232 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome