; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10012326 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10012326
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationChr01:20112760..20114295
RNA-Seq ExpressionHG10012326
SyntenyHG10012326
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033636.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]5.0e-7136.59Show/hide
Query:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYV
        MDYA+LVFSHLNP+FKTEIQFWNAMIRGYAFNGP  QS+SLYGDLLQRGLKPH+FTYPFVL SCADLGW WDGKKVHCRILKTGFSLN SVSDALFNLYV
Subjt:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYV

Query:  KISEFSGPGNVTDGMASDARKVFDEMSVRSV---------------------------------------------------------------------
          S+F+GP +  DGMASDARKVFDEM VRSV                                                                     
Subjt:  KISEFSGPGNVTDGMASDARKVFDEMSVRSV---------------------------------------------------------------------

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Query:  -----------------------EADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDNILKKTGQST
                               EADVAIWGALLGGCKLRGDFKRAGEIVERA KLRS EGGIHVS SNMYASVE W EAV AREK+E +NILKKTGQS+
Subjt:  -----------------------EADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDNILKKTGQST

Query:  VIYAPSGAHRL
        VIYAP+G   L
Subjt:  VIYAPSGAHRL

KAE8650456.1 hypothetical protein Csa_011365 [Cucumis sativus]4.2e-7842.27Show/hide
Query:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYV
        MDYASLVFSHL+P+FKTEIQFWNAMIRGYAFNGP  QSVSLYGDLLQRGLKPH+FTYPFVL SCADLGW WDGKKVHCRILKTGFSLN SVSDALF+LYV
Subjt:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYV

Query:  KISEFSGPGNVTDGMASDARKVFDEMSVRSV---------------------------------------------------------------------
          S+F+GP +  DGMASDARKVFDEM VRSV                                                                     
Subjt:  KISEFSGPGNVTDGMASDARKVFDEMSVRSV---------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
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Query:  --------------------------------------------------------EADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSL
                                                                EADVAIWGALLGGCKLRGDFKRAGEIVERA KLRS EGGIHVS 
Subjt:  --------------------------------------------------------EADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSL

Query:  SNMYASVEHWPEAVTAREKLEEDNILKKTGQSTVIYAPSG
        SNMYASVE W EAV AREK+E +NILKKTGQS+VIYAP+G
Subjt:  SNMYASVEHWPEAVTAREKLEEDNILKKTGQSTVIYAPSG

XP_004140846.2 pentatricopeptide repeat-containing protein At3g29230 [Cucumis sativus]2.5e-7036.69Show/hide
Query:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYV
        MDYASLVFSHL+P+FKTEIQFWNAMIRGYAFNGP  QSVSLYGDLLQRGLKPH+FTYPFVL SCADLGW WDGKKVHCRILKTGFSLN SVSDALF+LYV
Subjt:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYV

Query:  KISEFSGPGNVTDGMASDARKVFDEMSVRSV---------------------------------------------------------------------
          S+F+GP +  DGMASDARKVFDEM VRSV                                                                     
Subjt:  KISEFSGPGNVTDGMASDARKVFDEMSVRSV---------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
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Query:  -----------------------EADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDNILKKTGQST
                               EADVAIWGALLGGCKLRGDFKRAGEIVERA KLRS EGGIHVS SNMYASVE W EAV AREK+E +NILKKTGQS+
Subjt:  -----------------------EADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDNILKKTGQST

Query:  VIYAPSG
        VIYAP+G
Subjt:  VIYAPSG

XP_023541409.1 pentatricopeptide repeat-containing protein At3g29230-like [Cucurbita pepo subsp. pepo]3.2e-7035.83Show/hide
Query:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYV
        MDYASLVFSHLNP+F+TE+QFWNAM+RGYAFNGPVE+SVSLYG+LLQRGLKPHNFTYP+VLNSCADLGW WDGKKVHCRI+KTGFSLN SVSDAL NLY+
Subjt:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYV

Query:  KISEFSGPGNVTDGMASDARKVFDEMSVRSVEA-------------------------------------------------------------------
        KISEFSGPG V+DG   DARK+FDEM  R++E                                                                    
Subjt:  KISEFSGPGNVTDGMASDARKVFDEMSVRSVEA-------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
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Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
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Query:  -------------------------DVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDNILKKTGQST
                                 DVAIWGALLGGCKLR DFKRA EIVER  KLRSNEGGIHVSLSNMYASVEHW EA+TAREK+EE+NILKKTGQS+
Subjt:  -------------------------DVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDNILKKTGQST

Query:  VIYAPSGA
        VIYAP G+
Subjt:  VIYAPSGA

XP_038890585.1 pentatricopeptide repeat-containing protein At3g29230-like [Benincasa hispida]2.0e-8040.12Show/hide
Query:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYV
        MDYASLVFSHLNP FKTEIQFWNAMIRGYAFNGPVEQSVSLYG LLQRGLKPHN TY FVLNSCADLGW WDGKKVHCRILK+GFSLNCSVS ALFNLYV
Subjt:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYV

Query:  KISEFSGPGNVTDGMASDARKVFDEMSVRSV---------------------------------------------------------------------
        KISEFSGPG+VTDG+ASDARKVFDEM VRSV                                                                     
Subjt:  KISEFSGPGNVTDGMASDARKVFDEMSVRSV---------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
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Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
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Query:  -----------------------EADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDNILKKTGQST
                               EADVAIWGALLGGCKLRGDFKRA EIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREK+EE+NILKKTGQS+
Subjt:  -----------------------EADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDNILKKTGQST

Query:  VIYAPSGAHRL
        VIYAPSGAHRL
Subjt:  VIYAPSGAHRL

TrEMBL top hitse value%identityAlignment
A0A0A0L9R7 Uncharacterized protein4.6e-7841.99Show/hide
Query:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYV
        MDYASLVFSHL+P+FKTEIQFWNAMIRGYAFNGP  QSVSLYGDLLQRGLKPH+FTYPFVL SCADLGW WDGKKVHCRILKTGFSLN SVSDALF+LYV
Subjt:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYV

Query:  KISEFSGPGNVTDGMASDARKVFDEMSVRSV---------------------------------------------------------------------
          S+F+GP +  DGMASDARKVFDEM VRSV                                                                     
Subjt:  KISEFSGPGNVTDGMASDARKVFDEMSVRSV---------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
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Query:  -----------------------------------------------------------EADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIH
                                                                   EADVAIWGALLGGCKLRGDFKRAGEIVERA KLRS EGGIH
Subjt:  -----------------------------------------------------------EADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIH

Query:  VSLSNMYASVEHWPEAVTAREKLEEDNILKKTGQSTVIYAPSG
        VS SNMYASVE W EAV AREK+E +NILKKTGQS+VIYAP+G
Subjt:  VSLSNMYASVEHWPEAVTAREKLEEDNILKKTGQSTVIYAPSG

A0A1S3AZC1 pentatricopeptide repeat-containing protein At3g29230-like4.4e-6561.47Show/hide
Query:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYV
        MDYA+LVFSHLNP+FKTEIQFWNAMIRGYAFNGP  QS+SLYGDLLQRGLKPH+FTYPFVL SCADLGW WDGKKVHCRILKTGFSLN SVSDALFNLYV
Subjt:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYV

Query:  KISEFSGPGNVTDGMASDARKVFDEMSVRSVEADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAR---EKLEE
          S+F+GP +  DGMASDARKVFDEM VRSVE    +W  ++    LR  +  AG++        + E    VS + M +      E + AR   EK+ E
Subjt:  KISEFSGPGNVTDGMASDARKVFDEMSVRSVEADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAR---EKLEE

Query:  DNILKKTGQSTVIYAPSG
         N++  T   +  YA +G
Subjt:  DNILKKTGQSTVIYAPSG

A0A5D3DH88 Pentatricopeptide repeat-containing protein2.4e-7136.59Show/hide
Query:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYV
        MDYA+LVFSHLNP+FKTEIQFWNAMIRGYAFNGP  QS+SLYGDLLQRGLKPH+FTYPFVL SCADLGW WDGKKVHCRILKTGFSLN SVSDALFNLYV
Subjt:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYV

Query:  KISEFSGPGNVTDGMASDARKVFDEMSVRSV---------------------------------------------------------------------
          S+F+GP +  DGMASDARKVFDEM VRSV                                                                     
Subjt:  KISEFSGPGNVTDGMASDARKVFDEMSVRSV---------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
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Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
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Query:  -----------------------EADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDNILKKTGQST
                               EADVAIWGALLGGCKLRGDFKRAGEIVERA KLRS EGGIHVS SNMYASVE W EAV AREK+E +NILKKTGQS+
Subjt:  -----------------------EADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDNILKKTGQST

Query:  VIYAPSGAHRL
        VIYAP+G   L
Subjt:  VIYAPSGAHRL

A0A6J1FZ38 pentatricopeptide repeat-containing protein At3g29230-like1.1e-6835.43Show/hide
Query:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYV
        MDYASLVFSHLNP+F+TE+QFWNAMIRGYAFNGPVE+S SLYG+LLQRGLKPHNFTYP+VLNSCADLGW WDGKKVHCRI+KTGFSLN SVSDAL NLY+
Subjt:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYV

Query:  KISEFSGPGNVTDGMASDARKVFDEMSVRSVEA-------------------------------------------------------------------
        KISE SGPG V+DG   DARK+FDEM  R++E                                                                    
Subjt:  KISEFSGPGNVTDGMASDARKVFDEMSVRSVEA-------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
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Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
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Query:  -------------------------DVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDNILKKTGQST
                                 DVAIWGALLGGCKL  DFKRA EIVER  KLRSNEGGIHVSLSNMYASVEHW EA+TAREK+EE+NILKKTGQS+
Subjt:  -------------------------DVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDNILKKTGQST

Query:  VIYAPSGA
        VIYAP G+
Subjt:  VIYAPSGA

A0A6J1HXE5 pentatricopeptide repeat-containing protein At3g29230-like4.3e-6834.65Show/hide
Query:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYV
        MDYA LVFSHLNP+F+TE+QFWNAM+RGYAFNGPVE+SVSLYG+LLQRGLKPHNFTYP+VLNSCADLGW WDGKKVHCRI+KTGFSLNCSVSDAL NLY+
Subjt:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYV

Query:  KISEFSGPGNVTDGMASDARKVFDEMSVRSVEA-------------------------------------------------------------------
        KISEFSGPG V+DG   DARK+FDEM  R++E                                                                    
Subjt:  KISEFSGPGNVTDGMASDARKVFDEMSVRSVEA-------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
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Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
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Query:  -------------------------DVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDNILKKTGQST
                                 D+AIWGALLGGCKLR DFKRA +IVER  KLRS EGGIHVSLSNMYASVEHW EA++AREK+EE+NILK+TGQS+
Subjt:  -------------------------DVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDNILKKTGQST

Query:  VIYAPSGA
        VIYA  G+
Subjt:  VIYAPSGA

SwissProt top hitse value%identityAlignment
A8MQA3 Pentatricopeptide repeat-containing protein At4g210651.5e-1723.47Show/hide
Query:  WNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYVKISEF----------------
        WN++I G+A NG  E++++LY ++  +G+KP  FT   +L++CA +G L  GK+VH  ++K G + N   S+ L +LY +                    
Subjt:  WNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYVKISEF----------------

Query:  ---------------------------------------------SGPGNVTDGM----------------------------ASDARKVFDEMSVRSVE
                                                     S  G V +G                             A   +K ++ +    ++
Subjt:  ---------------------------------------------SGPGNVTDGM----------------------------ASDARKVFDEMSVRSVE

Query:  ADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDNILKKTGQSTV
         +V IW  LLG C + GD   A     +  +L  N  G +V LSNMYAS + W +    R+++  D + K  G S V
Subjt:  ADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDNILKKTGQSTV

O23337 Pentatricopeptide repeat-containing protein At4g148204.3e-1725.79Show/hide
Query:  WNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYVKISEFSGPGNVTD--GMASDA
        W++MI   + +G    ++SL+  + Q  ++P+  T+  VL  C+  G + +GKK+             S++D  +N+  K+  +   G + D  G A+  
Subjt:  WNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYVKISEFSGPGNVTD--GMASDA

Query:  RKVFDEMSVRSVEADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDNILKKTGQSTV
        R+  + +    V ++V IWG+L+  C++ G+ +      +R  +L  +  G  V +SN+YA  + W +    R  +EE N+ K+ G S +
Subjt:  RKVFDEMSVRSVEADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDNILKKTGQSTV

O49619 Pentatricopeptide repeat-containing protein At4g35130, chloroplastic1.8e-1834Show/hide
Query:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYV
        M+ A  +F  +N   K +   WN MI+G+   G   ++V  Y  ++  G+K   FTYPFV+ S A +  L +GKK+H  ++K GF  +  V ++L +LY+
Subjt:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYV

Query:  KISEFSGPGNVTDGMASDARKVFDEMSVRSVEADVAIWGALLGGCKLRGD
        K+           G A DA KVF+EM     E D+  W +++ G    GD
Subjt:  KISEFSGPGNVTDGMASDARKVFDEMSVRSVEADVAIWGALLGGCKLRGD

Q5XEY7 Pentatricopeptide repeat-containing protein At4g141702.5e-1724.17Show/hide
Query:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYV
        +DYA  VF +++   + ++  W+++I GY  +G V  S  L+ ++L+ G++P+  T+  VL++CA  G L +   ++ R+++             +N+  
Subjt:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYV

Query:  KISEFSGPGNVTD--GMASDARKVFDEMSVRSVEADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEED
        ++  ++   +     G+  +A K  ++M V+    D A+ GA+L GCK+ G+ +    +     +L+  +   +V+L+ +Y++   + EA + R+ ++E 
Subjt:  KISEFSGPGNVTD--GMASDARKVFDEMSVRSVEADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEED

Query:  NILKKTGQSTV
         I K  G S++
Subjt:  NILKKTGQSTV

Q9SZT8 Pentatricopeptide repeat-containing protein ELI1, chloroplastic3.2e-2030Show/hide
Query:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQ-RGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLY
        ++ A LVF   N T + +I  WNAMI GYA +G  + ++ L+ ++    GL+P + T+   L +CA           H  ++  G  +  S+    + + 
Subjt:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQ-RGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLY

Query:  VKISEFSGPGNVTDGMASDARKVFDEMSVRSVEADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDN
         KI  +    ++  G A   ++ ++ +   +++AD  +W ++LG CKL GDF    EI E    L     GI+V LSN+YASV  +      R  ++E  
Subjt:  VKISEFSGPGNVTDGMASDARKVFDEMSVRSVEADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDN

Query:  ILKKTGQSTV
        I+K+ G ST+
Subjt:  ILKKTGQSTV

Arabidopsis top hitse value%identityAlignment
AT4G14820.1 Pentatricopeptide repeat (PPR) superfamily protein3.1e-1825.79Show/hide
Query:  WNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYVKISEFSGPGNVTD--GMASDA
        W++MI   + +G    ++SL+  + Q  ++P+  T+  VL  C+  G + +GKK+             S++D  +N+  K+  +   G + D  G A+  
Subjt:  WNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYVKISEFSGPGNVTD--GMASDA

Query:  RKVFDEMSVRSVEADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDNILKKTGQSTV
        R+  + +    V ++V IWG+L+  C++ G+ +      +R  +L  +  G  V +SN+YA  + W +    R  +EE N+ K+ G S +
Subjt:  RKVFDEMSVRSVEADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDNILKKTGQSTV

AT4G21065.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.1e-1823.47Show/hide
Query:  WNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYVKISEF----------------
        WN++I G+A NG  E++++LY ++  +G+KP  FT   +L++CA +G L  GK+VH  ++K G + N   S+ L +LY +                    
Subjt:  WNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYVKISEF----------------

Query:  ---------------------------------------------SGPGNVTDGM----------------------------ASDARKVFDEMSVRSVE
                                                     S  G V +G                             A   +K ++ +    ++
Subjt:  ---------------------------------------------SGPGNVTDGM----------------------------ASDARKVFDEMSVRSVE

Query:  ADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDNILKKTGQSTV
         +V IW  LLG C + GD   A     +  +L  N  G +V LSNMYAS + W +    R+++  D + K  G S V
Subjt:  ADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDNILKKTGQSTV

AT4G21065.2 Tetratricopeptide repeat (TPR)-like superfamily protein1.1e-1823.47Show/hide
Query:  WNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYVKISEF----------------
        WN++I G+A NG  E++++LY ++  +G+KP  FT   +L++CA +G L  GK+VH  ++K G + N   S+ L +LY +                    
Subjt:  WNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYVKISEF----------------

Query:  ---------------------------------------------SGPGNVTDGM----------------------------ASDARKVFDEMSVRSVE
                                                     S  G V +G                             A   +K ++ +    ++
Subjt:  ---------------------------------------------SGPGNVTDGM----------------------------ASDARKVFDEMSVRSVE

Query:  ADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDNILKKTGQSTV
         +V IW  LLG C + GD   A     +  +L  N  G +V LSNMYAS + W +    R+++  D + K  G S V
Subjt:  ADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDNILKKTGQSTV

AT4G35130.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.2e-1934Show/hide
Query:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYV
        M+ A  +F  +N   K +   WN MI+G+   G   ++V  Y  ++  G+K   FTYPFV+ S A +  L +GKK+H  ++K GF  +  V ++L +LY+
Subjt:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYV

Query:  KISEFSGPGNVTDGMASDARKVFDEMSVRSVEADVAIWGALLGGCKLRGD
        K+           G A DA KVF+EM     E D+  W +++ G    GD
Subjt:  KISEFSGPGNVTDGMASDARKVFDEMSVRSVEADVAIWGALLGGCKLRGD

AT4G37380.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.3e-2130Show/hide
Query:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQ-RGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLY
        ++ A LVF   N T + +I  WNAMI GYA +G  + ++ L+ ++    GL+P + T+   L +CA           H  ++  G  +  S+    + + 
Subjt:  MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQ-RGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLY

Query:  VKISEFSGPGNVTDGMASDARKVFDEMSVRSVEADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDN
         KI  +    ++  G A   ++ ++ +   +++AD  +W ++LG CKL GDF    EI E    L     GI+V LSN+YASV  +      R  ++E  
Subjt:  VKISEFSGPGNVTDGMASDARKVFDEMSVRSVEADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDN

Query:  ILKKTGQSTV
        I+K+ G ST+
Subjt:  ILKKTGQSTV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTACGCAAGTCTCGTGTTTTCTCATCTCAATCCCACTTTCAAAACCGAAATTCAATTCTGGAACGCAATGATCAGGGGTTACGCTTTCAATGGCCCTGTTGAGCA
ATCTGTGTCCTTGTATGGCGATTTGCTTCAAAGAGGACTCAAACCCCATAATTTCACCTACCCATTTGTGCTAAACTCGTGTGCTGATTTGGGTTGGTTATGGGATGGAA
AAAAAGTACATTGTCGTATTCTCAAGACTGGATTTTCCTTGAATTGTTCAGTTTCTGATGCGCTTTTTAATTTATATGTGAAAATTTCAGAATTTTCTGGACCTGGGAAT
GTTACTGATGGGATGGCTTCTGATGCTCGCAAGGTGTTCGATGAAATGTCTGTTAGATCTGTTGAAGCTGATGTTGCAATATGGGGAGCGTTGTTGGGTGGTTGCAAGTT
AAGAGGTGATTTCAAGAGAGCAGGAGAAATAGTTGAGAGGGCGAGCAAATTGAGATCAAATGAAGGTGGAATCCATGTGAGCTTGTCGAACATGTATGCATCAGTTGAGC
ACTGGCCAGAGGCTGTCACTGCAAGGGAAAAACTGGAAGAGGACAATATTTTGAAGAAGACTGGCCAAAGTACTGTTATTTATGCACCCAGTGGGGCTCATCGTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACTACGCAAGTCTCGTGTTTTCTCATCTCAATCCCACTTTCAAAACCGAAATTCAATTCTGGAACGCAATGATCAGGGGTTACGCTTTCAATGGCCCTGTTGAGCA
ATCTGTGTCCTTGTATGGCGATTTGCTTCAAAGAGGACTCAAACCCCATAATTTCACCTACCCATTTGTGCTAAACTCGTGTGCTGATTTGGGTTGGTTATGGGATGGAA
AAAAAGTACATTGTCGTATTCTCAAGACTGGATTTTCCTTGAATTGTTCAGTTTCTGATGCGCTTTTTAATTTATATGTGAAAATTTCAGAATTTTCTGGACCTGGGAAT
GTTACTGATGGGATGGCTTCTGATGCTCGCAAGGTGTTCGATGAAATGTCTGTTAGATCTGTTGAAGCTGATGTTGCAATATGGGGAGCGTTGTTGGGTGGTTGCAAGTT
AAGAGGTGATTTCAAGAGAGCAGGAGAAATAGTTGAGAGGGCGAGCAAATTGAGATCAAATGAAGGTGGAATCCATGTGAGCTTGTCGAACATGTATGCATCAGTTGAGC
ACTGGCCAGAGGCTGTCACTGCAAGGGAAAAACTGGAAGAGGACAATATTTTGAAGAAGACTGGCCAAAGTACTGTTATTTATGCACCCAGTGGGGCTCATCGTTTGTAA
Protein sequenceShow/hide protein sequence
MDYASLVFSHLNPTFKTEIQFWNAMIRGYAFNGPVEQSVSLYGDLLQRGLKPHNFTYPFVLNSCADLGWLWDGKKVHCRILKTGFSLNCSVSDALFNLYVKISEFSGPGN
VTDGMASDARKVFDEMSVRSVEADVAIWGALLGGCKLRGDFKRAGEIVERASKLRSNEGGIHVSLSNMYASVEHWPEAVTAREKLEEDNILKKTGQSTVIYAPSGAHRL