| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6574158.1 DNA-directed RNA polymerases II, IV and V subunit 6A, partial [Cucurbita argyrosperma subsp. sororia] | 2.6e-57 | 94.4 | Show/hide | Query: ENHVQEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
E ++EGAEEELDNNN DDVPGEPVEAE+KEDEEP+ERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Subjt: ENHVQEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Query: DGSYEDWGVDELIVEDSWKRQVGGA
DGSYEDWGVDELIVEDSWKRQVGGA
Subjt: DGSYEDWGVDELIVEDSWKRQVGGA
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| | XP_004140788.1 DNA-directed RNA polymerases II, IV and V subunit 6A [Cucumis sativus] | 5.8e-57 | 92.8 | Show/hide | Query: ENHVQEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
E ++EGAEEEL+NNNNDD+PGEPVEAEEKEDEEP+ R RKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Subjt: ENHVQEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Query: DGSYEDWGVDELIVEDSWKRQVGGA
DGSYEDWGVDELIVEDSWKRQVGGA
Subjt: DGSYEDWGVDELIVEDSWKRQVGGA
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| | XP_022141284.1 DNA-directed RNA polymerases II, IV and V subunit 6A [Momordica charantia] | 1.5e-57 | 96 | Show/hide | Query: ENHVQEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
E ++EGAEEELDNNNNDDV GEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Subjt: ENHVQEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Query: DGSYEDWGVDELIVEDSWKRQVGGA
DGSYEDWGVDELIVEDSWKRQVGGA
Subjt: DGSYEDWGVDELIVEDSWKRQVGGA
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| | XP_022923151.1 DNA-directed RNA polymerases II, IV and V subunit 6A-like [Cucurbita moschata] | 1.1e-58 | 96.8 | Show/hide | Query: ENHVQEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
E ++EGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Subjt: ENHVQEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Query: DGSYEDWGVDELIVEDSWKRQVGGA
DGSYEDWGVDELIVEDSWKRQVGGA
Subjt: DGSYEDWGVDELIVEDSWKRQVGGA
|
| | XP_022944842.1 DNA-directed RNA polymerases II, IV and V subunit 6A-like [Cucurbita moschata] | 2.6e-57 | 94.4 | Show/hide | Query: ENHVQEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
E ++EGAEEELDNNN DDVPGEPVEAE+KEDEEP+ERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Subjt: ENHVQEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Query: DGSYEDWGVDELIVEDSWKRQVGGA
DGSYEDWGVDELIVEDSWKRQVGGA
Subjt: DGSYEDWGVDELIVEDSWKRQVGGA
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6J1CI61 DNA-directed RNA polymerases II, IV and V subunit 6A | 7.4e-58 | 96 | Show/hide | Query: ENHVQEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
E ++EGAEEELDNNNNDDV GEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Subjt: ENHVQEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Query: DGSYEDWGVDELIVEDSWKRQVGGA
DGSYEDWGVDELIVEDSWKRQVGGA
Subjt: DGSYEDWGVDELIVEDSWKRQVGGA
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| | A0A6J1E614 DNA-directed RNA polymerases II, IV and V subunit 6A-like | 5.1e-59 | 96.8 | Show/hide | Query: ENHVQEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
E ++EGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Subjt: ENHVQEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Query: DGSYEDWGVDELIVEDSWKRQVGGA
DGSYEDWGVDELIVEDSWKRQVGGA
Subjt: DGSYEDWGVDELIVEDSWKRQVGGA
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| | A0A6J1FZ93 DNA-directed RNA polymerases II, IV and V subunit 6A-like | 1.3e-57 | 94.4 | Show/hide | Query: ENHVQEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
E ++EGAEEELDNNN DDVPGEPVEAE+KEDEEP+ERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Subjt: ENHVQEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Query: DGSYEDWGVDELIVEDSWKRQVGGA
DGSYEDWGVDELIVEDSWKRQVGGA
Subjt: DGSYEDWGVDELIVEDSWKRQVGGA
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| | A0A6J1HXF2 DNA-directed RNA polymerases II, IV and V subunit 6A-like | 1.3e-57 | 94.4 | Show/hide | Query: ENHVQEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
E ++EGAEEELDNNN DDVPGEPVEAE+KEDEEP+ERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Subjt: ENHVQEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Query: DGSYEDWGVDELIVEDSWKRQVGGA
DGSYEDWGVDELIVEDSWKRQVGGA
Subjt: DGSYEDWGVDELIVEDSWKRQVGGA
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| | A0A6J1J2R7 DNA-directed RNA polymerases II, IV and V subunit 6A-like | 5.1e-59 | 96.8 | Show/hide | Query: ENHVQEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
E ++EGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Subjt: ENHVQEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Query: DGSYEDWGVDELIVEDSWKRQVGGA
DGSYEDWGVDELIVEDSWKRQVGGA
Subjt: DGSYEDWGVDELIVEDSWKRQVGGA
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O88828 DNA-directed RNA polymerases I, II, and III subunit RPABC2 | 2.6e-28 | 60.16 | Show/hide | Query: EEELDNNNNDDVPG----EPVEAEEKEDEEPVE-----------RVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF
E+ D ++ DDV + +E E+E +E VE + R T+ +MTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP
Subjt: EEELDNNNNDDVPG----EPVEAEEKEDEEPVE-----------RVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF
Query: TIRRYLPDGSYEDWGVDELIVED
IRRYLPDGSYEDWGVDELI+ D
Subjt: TIRRYLPDGSYEDWGVDELIVED
|
| | P61217 DNA-directed RNA polymerases I, II, and III subunit RPABC2 | 3.4e-28 | 60.16 | Show/hide | Query: EEELDNNNNDDVPG----EPVEAEEKEDEEPVE-----------RVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF
E+ D ++ DDV + +E E+E +E VE + R T+ +MTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP
Subjt: EEELDNNNNDDVPG----EPVEAEEKEDEEPVE-----------RVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF
Query: TIRRYLPDGSYEDWGVDELIVED
IRRYLPDGSYEDWGVDELI+ D
Subjt: TIRRYLPDGSYEDWGVDELIVED
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| | P61219 DNA-directed RNA polymerases I, II, and III subunit RPABC2 | 2.6e-28 | 60.16 | Show/hide | Query: EEELDNNNNDDVPG----EPVEAEEKEDEEPVE-----------RVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF
E+ D ++ DDV + +E E+E +E VE + R T+ +MTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP
Subjt: EEELDNNNNDDVPG----EPVEAEEKEDEEPVE-----------RVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF
Query: TIRRYLPDGSYEDWGVDELIVED
IRRYLPDGSYEDWGVDELI+ D
Subjt: TIRRYLPDGSYEDWGVDELIVED
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| | Q9FJ98 DNA-directed RNA polymerases II, IV and V subunit 6A | 1.7e-51 | 82.26 | Show/hide | Query: ENHVQEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
E ++EG EE+++ NDDV GEP+EAE+K + EPV+R RKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYLP
Subjt: ENHVQEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Query: DGSYEDWGVDELIVEDSWKRQVGG
DGS+E+WGVDELIVEDSWKRQVGG
Subjt: DGSYEDWGVDELIVEDSWKRQVGG
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| | Q9SJ96 DNA-directed RNA polymerases II and V subunit 6B | 6.0e-49 | 80.65 | Show/hide | Query: ENHVQEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
E ++EG EE+ D NDDV +P+E E+K + EPV+R RKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYLP
Subjt: ENHVQEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Query: DGSYEDWGVDELIVEDSWKRQVGG
D SYE+WGVDELIVEDSWKRQVGG
Subjt: DGSYEDWGVDELIVEDSWKRQVGG
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G04630.1 RNA polymerase Rpb6 | 4.3e-50 | 80.65 | Show/hide | Query: ENHVQEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
E ++EG EE+ D NDDV +P+E E+K + EPV+R RKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYLP
Subjt: ENHVQEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Query: DGSYEDWGVDELIVEDSWKRQVGG
D SYE+WGVDELIVEDSWKRQVGG
Subjt: DGSYEDWGVDELIVEDSWKRQVGG
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| | AT5G51940.1 RNA polymerase Rpb6 | 1.2e-52 | 82.26 | Show/hide | Query: ENHVQEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
E ++EG EE+++ NDDV GEP+EAE+K + EPV+R RKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYLP
Subjt: ENHVQEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Query: DGSYEDWGVDELIVEDSWKRQVGG
DGS+E+WGVDELIVEDSWKRQVGG
Subjt: DGSYEDWGVDELIVEDSWKRQVGG
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