CuGenDBv2

Gene ID	HG10012344
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic
Genome location	Chr01:20247127..20250516
RNA-Seq Expression	HG10012344
Synteny	HG10012344
Gene Ontology terms	GO:0010190 - cytochrome b6f complex assembly (biological process)
InterPro domains	IPR021325 - Cofactor assembly of complex C subunit B, CCB2/CCB4 IPR044970 - COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004140790.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X2 [Cucumis sativus]

2.7e-141

91.35

Show/hide

Query:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
        MISSI SPSPLN+LTSA  FRAKSKTK  PAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
Subjt:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE

Query:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNEISGTDLLAWFEE
        ALGISLAAFSIALPYLGKFLKGA+PSGEA LPE TEQIFLLSQ + DN+KED+AWATYILLRNTNSISVLIQTQGALCVRGYWNSPN+IS  DLLAWFEE
Subjt:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNEISGTDLLAWFEE

Query:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL
        QLQSIGLSALKDA+YFPQISESGLWQMLP+GTRSVLVQP+VQNLKQSGNE++ MGGFILLASSLSYAFSDKDRAWIRA+ANKFD RAIL
Subjt:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL

XP_016899091.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucumis melo]

5.9e-144

93.43

Show/hide

Query:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
        MISSI SPSPLN+LTSA  FRAKSK  K PAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
Subjt:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE

Query:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNEISGTDLLAWFEE
        ALGISLAAFSIALPYLGKFLKGAVPSGEATLPE TEQIFLLSQ V DN+KED+AWATYILLRNTNSISVLIQTQGALCVRGYWNSPN+IS  DLLAWFEE
Subjt:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNEISGTDLLAWFEE

Query:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL
        QLQSIGLSALKDA+YFPQISESGLWQMLP+GTRSVLVQP+VQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFD RAIL
Subjt:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL

XP_023542853.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo]

6.3e-130

86.27

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Query:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
        M  +I SP PL RL+S  RFRAK+ +K  P I+ARLDDSKNS N+QLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAA  T AQLRTE
Subjt:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE

Query:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNEISGTDLLAWFEE
        ALGISLAAFSIALPYLGKFL+GAVPSGEATLPE  EQIF+LSQ V DNVK+DLAWATYILLRNTNSISVLIQ QG LCVRGYWNSPN+ISGTDLLAWFEE
Subjt:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNEISGTDLLAWFEE

Query:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFD
        QLQSIGLSAL DALYFPQISESGLWQMLP+GTRSVLVQP+ QNL QSGNEMEK+GGFIL+ASSLSYAFSDKDRAWIRALA KFD
Subjt:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFD

XP_031738698.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucumis sativus]

3.3e-139

89.19

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Query:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
        MISSI SPSPLN+LTSA  FRAKSKTK  PAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
Subjt:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE

Query:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNEISGTDLLAWFEE
        ALGISLAAFSIALPYLGKFLKGA+PSGEA LPE TEQIFLLSQ + DN+KED+AWATYILLRNTNSISVLIQTQGALCVRGYWNSPN+IS  DLLAWFEE
Subjt:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNEISGTDLLAWFEE

Query:  QLQSIGLSALKDALYFPQIS-------ESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL
        QLQSIGLSALKDA+YFPQIS       ESGLWQMLP+GTRSVLVQP+VQNLKQSGNE++ MGGFILLASSLSYAFSDKDRAWIRA+ANKFD RAIL
Subjt:  QLQSIGLSALKDALYFPQIS-------ESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL

XP_038884000.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Benincasa hispida]

1.7e-143

93.43

Show/hide

Query:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
        MISSI SPSPLNRLTSA RFRAK+KTK  PAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
Subjt:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE

Query:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNEISGTDLLAWFEE
        ALG+SLAAFSIALPYLGKFLKGAVPSGEATLP  TEQIFLLSQ V DNVKEDLAWATYILLRNTNSISVLIQ QGALCVRGYWNSPN+ISG DLLAWFEE
Subjt:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNEISGTDLLAWFEE

Query:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL
        QLQ IGLSALKDALYFPQISESGLWQMLPEGTRSVLVQP+VQNLKQ+G+EMEKMGGFILLASSLSYAF DKDRAWIRALANKFD RAIL
Subjt:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LBA9 Uncharacterized protein

1.3e-141

91.35

Show/hide

Query:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
        MISSI SPSPLN+LTSA  FRAKSKTK  PAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
Subjt:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE

Query:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNEISGTDLLAWFEE
        ALGISLAAFSIALPYLGKFLKGA+PSGEA LPE TEQIFLLSQ + DN+KED+AWATYILLRNTNSISVLIQTQGALCVRGYWNSPN+IS  DLLAWFEE
Subjt:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNEISGTDLLAWFEE

Query:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL
        QLQSIGLSALKDA+YFPQISESGLWQMLP+GTRSVLVQP+VQNLKQSGNE++ MGGFILLASSLSYAFSDKDRAWIRA+ANKFD RAIL
Subjt:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL

A0A1S4DSW9 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1

2.8e-144

93.43

Show/hide

Query:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
        MISSI SPSPLN+LTSA  FRAKSK  K PAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
Subjt:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE

Query:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNEISGTDLLAWFEE
        ALGISLAAFSIALPYLGKFLKGAVPSGEATLPE TEQIFLLSQ V DN+KED+AWATYILLRNTNSISVLIQTQGALCVRGYWNSPN+IS  DLLAWFEE
Subjt:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNEISGTDLLAWFEE

Query:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL
        QLQSIGLSALKDA+YFPQISESGLWQMLP+GTRSVLVQP+VQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFD RAIL
Subjt:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL

A0A5A7SUJ0 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2

2.8e-144

93.43

Show/hide

Query:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
        MISSI SPSPLN+LTSA  FRAKSK  K PAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
Subjt:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE

Query:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNEISGTDLLAWFEE
        ALGISLAAFSIALPYLGKFLKGAVPSGEATLPE TEQIFLLSQ V DN+KED+AWATYILLRNTNSISVLIQTQGALCVRGYWNSPN+IS  DLLAWFEE
Subjt:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNEISGTDLLAWFEE

Query:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL
        QLQSIGLSALKDA+YFPQISESGLWQMLP+GTRSVLVQP+VQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFD RAIL
Subjt:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL

A0A6J1CJH9 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1

2.8e-128

84.78

Show/hide

Query:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
        M  SI SP+PL RLTS  RFRAK++  K PA+SARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHF GSNSAA TTPAQLRTE
Subjt:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE

Query:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNEISGTDLLAWFEE
        ALG+SLAAFSIALPYLGKFLKGAVPSGEA+LPE TEQIF+LSQ V DNVKEDLAWATYILLRNTNSISVLIQ +G LCVRGYWNSPN+I G DL+AWFEE
Subjt:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNEISGTDLLAWFEE

Query:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL
        QLQSIGLSAL D LYFPQIS+S LW+MLP GTRSVLVQP    +KQSGN+MEK+GGFILLASSLSYAFSDKDRAWIRALANKF  R IL
Subjt:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL

A0A6J1G0N4 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic

2.8e-128

85.21

Show/hide

Query:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
        M  +I SP PL RL+S  RFRAK+ +K  P I+ARLDDSKNS ++QLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGS+SAA  T AQLRTE
Subjt:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE

Query:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNEISGTDLLAWFEE
        ALGISLAAFSIALPYLGKFL+GAVPSGEATLPE  EQIF+LSQ+V DNVK+DLAWATYILLRNTNSISVLIQ QG LCVRGYWNSPN+ISG DLLAWFEE
Subjt:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNEISGTDLLAWFEE

Query:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFD
        QLQSIGLSAL DALYFPQISESGLWQMLP+GTRSVLVQP+ QNL QSGNEMEK+GGFIL+ASSLSYAFSDKDRAWIRALA KFD
Subjt:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFD

SwissProt top hits

e value

%identity

Alignment

Q9FJ81 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic

8.1e-80

56.46

Show/hide

Query:  RFRAKSKTKKVPAISARLDD---SKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEALGISLAAFSIALPY
        +F  + + ++   I AR ++      +++QQLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLNHF   +++A  + +Q+R+EALG+SLAAFSIALPY
Subjt:  RFRAKSKTKKVPAISARLDD---SKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEALGISLAAFSIALPY

Query:  LGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNEISGTDLLAWFEEQLQSIGLSALKDALY
        +GKFLKG+V   + +LPE  EQ+F++S  + D++KEDLAWATY+LLRNT++I+VLI  QG LCVRGYWN P+++S   L  WF++++  IGL+ +K+ LY
Subjt:  LGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNEISGTDLLAWFEEQLQSIGLSALKDALY

Query:  FPQISESGL-WQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDG
        FPQ + S L   +LP+GTRS+ VQP+VQN     NE +K+ GF+L+AS+  YA+SDKDRAWI A+A KF G
Subjt:  FPQISESGL-WQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDG

Arabidopsis top hits

e value

%identity

Alignment

AT5G52110.1 Protein of unknown function (DUF2930)

5.7e-81

56.46

Show/hide

Query:  RFRAKSKTKKVPAISARLDD---SKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEALGISLAAFSIALPY
        +F  + + ++   I AR ++      +++QQLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLNHF   +++A  + +Q+R+EALG+SLAAFSIALPY
Subjt:  RFRAKSKTKKVPAISARLDD---SKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEALGISLAAFSIALPY

Query:  LGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNEISGTDLLAWFEEQLQSIGLSALKDALY
        +GKFLKG+V   + +LPE  EQ+F++S  + D++KEDLAWATY+LLRNT++I+VLI  QG LCVRGYWN P+++S   L  WF++++  IGL+ +K+ LY
Subjt:  LGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNEISGTDLLAWFEEQLQSIGLSALKDALY

Query:  FPQISESGL-WQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDG
        FPQ + S L   +LP+GTRS+ VQP+VQN     NE +K+ GF+L+AS+  YA+SDKDRAWI A+A KF G
Subjt:  FPQISESGL-WQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDG

AT5G52110.2 Protein of unknown function (DUF2930)

5.7e-81

56.46

Show/hide

Query:  RFRAKSKTKKVPAISARLDD---SKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEALGISLAAFSIALPY
        +F  + + ++   I AR ++      +++QQLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLNHF   +++A  + +Q+R+EALG+SLAAFSIALPY
Subjt:  RFRAKSKTKKVPAISARLDD---SKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEALGISLAAFSIALPY

Query:  LGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNEISGTDLLAWFEEQLQSIGLSALKDALY
        +GKFLKG+V   + +LPE  EQ+F++S  + D++KEDLAWATY+LLRNT++I+VLI  QG LCVRGYWN P+++S   L  WF++++  IGL+ +K+ LY
Subjt:  LGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNEISGTDLLAWFEEQLQSIGLSALKDALY

Query:  FPQISESGL-WQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDG
        FPQ + S L   +LP+GTRS+ VQP+VQN     NE +K+ GF+L+AS+  YA+SDKDRAWI A+A KF G
Subjt:  FPQISESGL-WQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATCAGCTCAATTTCCTCTCCCAGCCCGTTGAATCGGTTGACGTCCGCTTTCCGATTTCGCGCTAAAAGTAAGACGAAGAAGGTTCCAGCAATTTCTGCTCGTCTTGA
CGATTCTAAGAACTCAGCTAATCAGCAACTCAATCTCTCTGTCCTTCGGTTCACACTCGGGATTCCTGGGTTGGATGAGTCTTACTTACCCAGATGGATTGGATACGGAT
TTGGTTCACTTCTTCTATTGAATCACTTTGTTGGCTCGAATTCAGCCGCTCTCACCACCCCAGCACAGTTAAGAACTGAGGCTTTAGGCATTTCCTTGGCAGCATTTTCT
ATTGCACTCCCCTACTTGGGAAAGTTTCTTAAGGGTGCAGTTCCATCTGGCGAAGCTACCCTCCCTGAAGTCACTGAGCAAATATTTCTCTTGTCACAAACTGTATTGGA
TAATGTGAAGGAAGACTTGGCTTGGGCAACATACATCTTGCTGCGCAATACTAACAGTATATCAGTGTTAATACAGACTCAAGGGGCGTTATGTGTTCGAGGATACTGGA
ATAGTCCAAATGAAATATCAGGAACAGATTTACTTGCCTGGTTTGAGGAGCAGCTTCAGAGCATTGGCCTATCTGCATTAAAGGATGCCCTCTATTTCCCTCAGATTTCA
GAATCTGGACTGTGGCAAATGCTGCCCGAGGGCACTCGCTCAGTTTTGGTCCAACCGATGGTTCAAAATCTAAAGCAAAGTGGCAACGAGATGGAAAAGATGGGAGGATT
CATACTGCTGGCCTCAAGTTTAAGTTATGCATTTAGCGATAAAGATAGAGCCTGGATAAGAGCTCTTGCTAACAAGTTTGATGGCAGGGCCATCCTCTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEALGISLAAFS
IALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNEISGTDLLAWFEEQLQSIGLSALKDALYFPQIS
ESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL

HG10012344 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome