CuGenDBv2

Gene ID	HG10012354
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ATP-dependent Clp protease ATP-binding subunit clpX
Genome location	Chr01:20333990..20334835
RNA-Seq Expression	HG10012354
Synteny	HG10012354
Gene Ontology terms	GO:0006508 - proteolysis (biological process) GO:0005524 - ATP binding (molecular function) GO:0008233 - peptidase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYK22273.1 uncharacterized protein E5676_scaffold440G00280 [Cucumis melo var. makuwa]

1.9e-111

87.08

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Query:  MGCKLNSPNTPILFKFATKRSKLGGKSINFCPTFCLNSQNQETPTIPTAINIPKSDISSVHFKSLTACKLGISRYPDFQYNAEGGTGTGSAEIRGD-GSS
        MGCKLNSPNTPILFKFATKRSKLGGKSINF PT CLN+QNQETPT      IPKS+IS+VHFKSLTACKLGISR+PDF+YNAEGGTGTGS +I  D  SS
Subjt:  MGCKLNSPNTPILFKFATKRSKLGGKSINFCPTFCLNSQNQETPTIPTAINIPKSDISSVHFKSLTACKLGISRYPDFQYNAEGGTGTGSAEIRGD-GSS

Query:  SQVIVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPELFHGNINQESGKVELEFKAKFMFSIGSLYKAPPLLVKTVLSSEESRGSLRSGKGERLDDK
        S+++VSFDV TLYIPPLTTQTTKFLGLPLPPFLKIDILPE F G+INQESGKVELEF++KF+FSIGSLYKAPPLLVKTVLSSEESRG +RSGKGERLDDK
Subjt:  SQVIVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPELFHGNINQESGKVELEFKAKFMFSIGSLYKAPPLLVKTVLSSEESRGSLRSGKGERLDDK

Query:  GKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
        GKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
Subjt:  GKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS

XP_004140796.1 uncharacterized protein LOC101221214 [Cucumis sativus]

1.2e-113

86.67

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Query:  MGCKLNSPNTPILFKFATKRSKLGGKSINFCPTFCLNSQNQETPTIPTAINIPKSDISSVHFKSLTACKLGISRYPDFQYNAEGGTGTGSAEIRGD-GSS
        MGCKLNSPNTPILFKF+TKRS LGGKSI F PT CLNSQNQETPTIPT   IPKS+IS+VHFKSLTACKLGISR+PDFQYNAEGGTGTGS +I  D GS+
Subjt:  MGCKLNSPNTPILFKFATKRSKLGGKSINFCPTFCLNSQNQETPTIPTAINIPKSDISSVHFKSLTACKLGISRYPDFQYNAEGGTGTGSAEIRGD-GSS

Query:  SQVIVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPELFHGNINQESGKVELEFKAKFMFSIGSLYKAPPLLVKTVLSSEESRGSLRSGKGERLDDK
        S+++VSFDVDTLYIPPLTTQTTKFLGLPLPPFLKID+LPE F G+INQESGKVELEF++KF+FSIGSLY+APPLLVKTVLSSEESRG +RSGKGERLDD 
Subjt:  SQVIVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPELFHGNINQESGKVELEFKAKFMFSIGSLYKAPPLLVKTVLSSEESRGSLRSGKGERLDDK

Query:  GKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
        G CRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
Subjt:  GKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS

XP_008439159.1 PREDICTED: uncharacterized protein LOC103484039 [Cucumis melo]

2.9e-112

87.5

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Query:  MGCKLNSPNTPILFKFATKRSKLGGKSINFCPTFCLNSQNQETPTIPTAINIPKSDISSVHFKSLTACKLGISRYPDFQYNAEGGTGTGSAEIRGD-GSS
        MGCKLNSPNTPILFKFATKRSKLGGKSINF PT CLN+QNQETPT      IPKS+IS+VHFKSLTACKLGISR+PDF+YNAEGGTGTGS +I  D  SS
Subjt:  MGCKLNSPNTPILFKFATKRSKLGGKSINFCPTFCLNSQNQETPTIPTAINIPKSDISSVHFKSLTACKLGISRYPDFQYNAEGGTGTGSAEIRGD-GSS

Query:  SQVIVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPELFHGNINQESGKVELEFKAKFMFSIGSLYKAPPLLVKTVLSSEESRGSLRSGKGERLDDK
        S+++VSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPE F G+INQESGKVELEF++KF+FSIGSLYKAPPLLVKTVLSSEESRG +RSGKGERLDDK
Subjt:  SQVIVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPELFHGNINQESGKVELEFKAKFMFSIGSLYKAPPLLVKTVLSSEESRGSLRSGKGERLDDK

Query:  GKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
        GKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
Subjt:  GKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS

XP_022968031.1 uncharacterized protein LOC111467398 [Cucurbita maxima]

2.1e-110

82.3

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Query:  MGCKLNSPNTPILFKFATKRSKLGGKSINFCPTFCLNSQNQETPTIPTA----INIPKSDISSVHFKSLTACKLGISRYPDFQYNAEGGTGTGSAEIRGD
        MGCKLN+PN P+LFKF TK  KLGGK+   CP FCL+SQNQETPTI TA      IPKS+ S+VHFKSLTACKLGISRYPDF+YNAEGGTGTGSA+I GD
Subjt:  MGCKLNSPNTPILFKFATKRSKLGGKSINFCPTFCLNSQNQETPTIPTA----INIPKSDISSVHFKSLTACKLGISRYPDFQYNAEGGTGTGSAEIRGD

Query:  GSSSQVIVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPELFHGNINQESGKVELEFKAKFMFSIGSLYKAPPLLVKTVLSSEESRGSLRSGKGERL
        G S +V VSFDV TLYIPPLTTQTTKFLGLPLPPFLKIDI+PELFHGNINQESGK+ELEFKAKF+FS+G++YKAPPLLVKTVL+SEES+GS+RSGKGERL
Subjt:  GSSSQVIVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPELFHGNINQESGKVELEFKAKFMFSIGSLYKAPPLLVKTVLSSEESRGSLRSGKGERL

Query:  DDKGKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
        D+KGKCRLVGVA VDPIDDL LNSFLSLPTECIA LNAIITFS
Subjt:  DDKGKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS

XP_038895315.1 uncharacterized protein LOC120083567 [Benincasa hispida]

1.1e-119

91.21

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Query:  MGCKLNSPNTPILFKFATKRSKLGGKSINFCPTFCLNSQNQETPTIPTAINIPKSDISSVHFKSLTACKLGISRYPDFQYNAEGGTGTGSAEIRGDGSSS
        MGCKLNSPNTPILFKFA+K  KLGGKSINFCPTFCLNSQNQET TIPT   IPK DIS+VHFKSLTACKLGISRYPDFQY+AEGGTGTGSA++ GD SS+
Subjt:  MGCKLNSPNTPILFKFATKRSKLGGKSINFCPTFCLNSQNQETPTIPTAINIPKSDISSVHFKSLTACKLGISRYPDFQYNAEGGTGTGSAEIRGDGSSS

Query:  QVIVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPELFHGNINQESGKVELEFKAKFMFSIGSLYKAPPLLVKTVLSSEESRGSLRSGKGERLDDKG
         V VSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPELFHGNINQESGKVELEF+AKFMFSIGSLYKAPPLLVKTVLSSEES+GS+RSG+GERLDDKG
Subjt:  QVIVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPELFHGNINQESGKVELEFKAKFMFSIGSLYKAPPLLVKTVLSSEESRGSLRSGKGERLDDKG

Query:  KCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
        KCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
Subjt:  KCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5S5 Uncharacterized protein

5.6e-114

86.67

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Query:  MGCKLNSPNTPILFKFATKRSKLGGKSINFCPTFCLNSQNQETPTIPTAINIPKSDISSVHFKSLTACKLGISRYPDFQYNAEGGTGTGSAEIRGD-GSS
        MGCKLNSPNTPILFKF+TKRS LGGKSI F PT CLNSQNQETPTIPT   IPKS+IS+VHFKSLTACKLGISR+PDFQYNAEGGTGTGS +I  D GS+
Subjt:  MGCKLNSPNTPILFKFATKRSKLGGKSINFCPTFCLNSQNQETPTIPTAINIPKSDISSVHFKSLTACKLGISRYPDFQYNAEGGTGTGSAEIRGD-GSS

Query:  SQVIVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPELFHGNINQESGKVELEFKAKFMFSIGSLYKAPPLLVKTVLSSEESRGSLRSGKGERLDDK
        S+++VSFDVDTLYIPPLTTQTTKFLGLPLPPFLKID+LPE F G+INQESGKVELEF++KF+FSIGSLY+APPLLVKTVLSSEESRG +RSGKGERLDD 
Subjt:  SQVIVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPELFHGNINQESGKVELEFKAKFMFSIGSLYKAPPLLVKTVLSSEESRGSLRSGKGERLDDK

Query:  GKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
        G CRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
Subjt:  GKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS

A0A1S3AYS2 uncharacterized protein LOC103484039

1.4e-112

87.5

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Query:  MGCKLNSPNTPILFKFATKRSKLGGKSINFCPTFCLNSQNQETPTIPTAINIPKSDISSVHFKSLTACKLGISRYPDFQYNAEGGTGTGSAEIRGD-GSS
        MGCKLNSPNTPILFKFATKRSKLGGKSINF PT CLN+QNQETPT      IPKS+IS+VHFKSLTACKLGISR+PDF+YNAEGGTGTGS +I  D  SS
Subjt:  MGCKLNSPNTPILFKFATKRSKLGGKSINFCPTFCLNSQNQETPTIPTAINIPKSDISSVHFKSLTACKLGISRYPDFQYNAEGGTGTGSAEIRGD-GSS

Query:  SQVIVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPELFHGNINQESGKVELEFKAKFMFSIGSLYKAPPLLVKTVLSSEESRGSLRSGKGERLDDK
        S+++VSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPE F G+INQESGKVELEF++KF+FSIGSLYKAPPLLVKTVLSSEESRG +RSGKGERLDDK
Subjt:  SQVIVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPELFHGNINQESGKVELEFKAKFMFSIGSLYKAPPLLVKTVLSSEESRGSLRSGKGERLDDK

Query:  GKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
        GKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
Subjt:  GKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS

A0A5A7SWH7 Uncharacterized protein

1.4e-112

87.5

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Query:  MGCKLNSPNTPILFKFATKRSKLGGKSINFCPTFCLNSQNQETPTIPTAINIPKSDISSVHFKSLTACKLGISRYPDFQYNAEGGTGTGSAEIRGD-GSS
        MGCKLNSPNTPILFKFATKRSKLGGKSINF PT CLN+QNQETPT      IPKS+IS+VHFKSLTACKLGISR+PDF+YNAEGGTGTGS +I  D  SS
Subjt:  MGCKLNSPNTPILFKFATKRSKLGGKSINFCPTFCLNSQNQETPTIPTAINIPKSDISSVHFKSLTACKLGISRYPDFQYNAEGGTGTGSAEIRGD-GSS

Query:  SQVIVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPELFHGNINQESGKVELEFKAKFMFSIGSLYKAPPLLVKTVLSSEESRGSLRSGKGERLDDK
        S+++VSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPE F G+INQESGKVELEF++KF+FSIGSLYKAPPLLVKTVLSSEESRG +RSGKGERLDDK
Subjt:  SQVIVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPELFHGNINQESGKVELEFKAKFMFSIGSLYKAPPLLVKTVLSSEESRGSLRSGKGERLDDK

Query:  GKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
        GKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
Subjt:  GKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS

A0A5D3DFF5 Uncharacterized protein

9.0e-112

87.08

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Query:  MGCKLNSPNTPILFKFATKRSKLGGKSINFCPTFCLNSQNQETPTIPTAINIPKSDISSVHFKSLTACKLGISRYPDFQYNAEGGTGTGSAEIRGD-GSS
        MGCKLNSPNTPILFKFATKRSKLGGKSINF PT CLN+QNQETPT      IPKS+IS+VHFKSLTACKLGISR+PDF+YNAEGGTGTGS +I  D  SS
Subjt:  MGCKLNSPNTPILFKFATKRSKLGGKSINFCPTFCLNSQNQETPTIPTAINIPKSDISSVHFKSLTACKLGISRYPDFQYNAEGGTGTGSAEIRGD-GSS

Query:  SQVIVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPELFHGNINQESGKVELEFKAKFMFSIGSLYKAPPLLVKTVLSSEESRGSLRSGKGERLDDK
        S+++VSFDV TLYIPPLTTQTTKFLGLPLPPFLKIDILPE F G+INQESGKVELEF++KF+FSIGSLYKAPPLLVKTVLSSEESRG +RSGKGERLDDK
Subjt:  SQVIVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPELFHGNINQESGKVELEFKAKFMFSIGSLYKAPPLLVKTVLSSEESRGSLRSGKGERLDDK

Query:  GKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
        GKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
Subjt:  GKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS

A0A6J1HTQ8 uncharacterized protein LOC111467398

9.9e-111

82.3

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Query:  MGCKLNSPNTPILFKFATKRSKLGGKSINFCPTFCLNSQNQETPTIPTA----INIPKSDISSVHFKSLTACKLGISRYPDFQYNAEGGTGTGSAEIRGD
        MGCKLN+PN P+LFKF TK  KLGGK+   CP FCL+SQNQETPTI TA      IPKS+ S+VHFKSLTACKLGISRYPDF+YNAEGGTGTGSA+I GD
Subjt:  MGCKLNSPNTPILFKFATKRSKLGGKSINFCPTFCLNSQNQETPTIPTA----INIPKSDISSVHFKSLTACKLGISRYPDFQYNAEGGTGTGSAEIRGD

Query:  GSSSQVIVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPELFHGNINQESGKVELEFKAKFMFSIGSLYKAPPLLVKTVLSSEESRGSLRSGKGERL
        G S +V VSFDV TLYIPPLTTQTTKFLGLPLPPFLKIDI+PELFHGNINQESGK+ELEFKAKF+FS+G++YKAPPLLVKTVL+SEES+GS+RSGKGERL
Subjt:  GSSSQVIVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPELFHGNINQESGKVELEFKAKFMFSIGSLYKAPPLLVKTVLSSEESRGSLRSGKGERL

Query:  DDKGKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
        D+KGKCRLVGVA VDPIDDL LNSFLSLPTECIA LNAIITFS
Subjt:  DDKGKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G62140.1 unknown protein

2.9e-62

55.42

Show/hide

Query:  KLNSPNTPILFKFATKRSKLGGKSINFCPTFCLNSQNQETPTIPTAINIPKSDISSVHFKSLTACKLGISRYPDFQYNAEGGTGTGSAEIRGD---GSSS
        K+NS  T I + + + R  +  KS N       NS N +    P    +P + + SV FK++   KLGISRYPDF+Y+  GG+G G+A+   D    S+S
Subjt:  KLNSPNTPILFKFATKRSKLGGKSINFCPTFCLNSQNQETPTIPTAINIPKSDISSVHFKSLTACKLGISRYPDFQYNAEGGTGTGSAEIRGD---GSSS

Query:  QVIVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPELFHGNINQESGKVELEFKAKFMFSI-GSLYKAPPLLVKTVLSSEESRGSLRSGKGERLDDK
        ++ V F+V TLYIP LT+QTTKFLG PLPPFLKIDI PE+F G INQESGKVELEF AKF F+  G +Y+AP L+V+TVL++EES G  + GKGERLD++
Subjt:  QVIVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPELFHGNINQESGKVELEFKAKFMFSI-GSLYKAPPLLVKTVLSSEESRGSLRSGKGERLDDK

Query:  GKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS
        GKCRLVGVA V+ IDDLF+N+FLSLP EC+A+L AII+ S
Subjt:  GKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAIITFS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGGTGTAAGCTAAACTCCCCCAATACCCCAATTCTCTTCAAATTTGCCACAAAAAGATCCAAACTTGGAGGCAAAAGCATCAATTTTTGTCCCACTTTCTGT
CTCAACAGTCAAAACCAAGAAACACCCACCATTCCCACCGCCATAAACATCCCAAAATCTGACATTTCTTCAGTTCATTTCAAGTCTCTCACAGCCTGCAAGCTT
GGCATATCCAGATATCCTGATTTCCAATACAATGCTGAAGGAGGAACAGGAACTGGGTCTGCCGAGATCCGCGGTGACGGTAGCAGCAGCCAAGTTATAGTTTCT
TTTGATGTTGACACCCTCTATATCCCACCATTGACAACTCAAACCACCAAGTTTCTAGGTCTGCCATTGCCACCGTTTCTGAAGATTGATATTCTTCCTGAATTA
TTCCATGGGAACATCAATCAAGAGTCTGGCAAGGTTGAGCTTGAATTTAAGGCAAAGTTCATGTTCTCAATTGGGAGTTTGTATAAAGCTCCTCCATTGCTGGTA
AAAACAGTGCTGAGTTCTGAAGAATCAAGAGGAAGCTTAAGAAGTGGAAAAGGAGAAAGATTGGATGATAAAGGAAAGTGCAGATTGGTGGGGGTGGCTACTGTT
GACCCTATTGATGATTTGTTTCTCAACTCCTTCCTTTCTCTCCCCACTGAATGTATTGCAAACCTCAATGCTATAATCACATTCTCTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MGCKLNSPNTPILFKFATKRSKLGGKSINFCPTFCLNSQNQETPTIPTAINIPKSDISSVHFKSLTACKLGISRYPDFQYNAEGGTGTGSAEIRGDGSSSQVIVS
FDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPELFHGNINQESGKVELEFKAKFMFSIGSLYKAPPLLVKTVLSSEESRGSLRSGKGERLDDKGKCRLVGVATV
DPIDDLFLNSFLSLPTECIANLNAIITFS

HG10012354 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome