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HG10012369 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10012369
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptiontranscription factor bHLH36-like
Genome locationChr01:20520976..20521912
RNA-Seq ExpressionHG10012369
SyntenyHG10012369
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:2000112 - regulation of cellular macromolecule biosynthetic process (biological process)
GO:0090575 - RNA polymerase II transcription factor complex (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR015660 - Achaete-scute transcription factor-related
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576761.1 Transcription factor basic helix-loop-helix 118, partial [Cucurbita argyrosperma subsp. sororia]1.3e-1064.94Show/hide
Query:  MFPFNNDPQTHLQNLFPSQIISPPEGSSSDNLHTNKIETTQNEERKIMHRDLERERRKQMASLLTNLRSLLPLEFIK
        MFPFN+ P  H Q   P Q +S  EGSS   L+ NKIE+T NE RKI+HRDLERERRKQM SLLTNLRSLLPL+ ++
Subjt:  MFPFNNDPQTHLQNLFPSQIISPPEGSSSDNLHTNKIETTQNEERKIMHRDLERERRKQMASLLTNLRSLLPLEFIK

XP_004148147.1 transcription factor bHLH36 [Cucumis sativus]6.5e-1868.42Show/hide
Query:  MFPFN------NDPQTHLQNLFPSQIISPPEG-SSSDNLHTN-KI-ETTQNEERKIMHRDLERERRKQMASLLTNLRSLLPLEFIKVDDSSKIDL
        MFPFN      +D Q HLQNLF  Q+IS  EG S ++NL+TN KI ETTQNEE+KIMHRDLERERRKQM SLLTNLRSLLPLEFIK    S++D+
Subjt:  MFPFN------NDPQTHLQNLFPSQIISPPEG-SSSDNLHTN-KI-ETTQNEERKIMHRDLERERRKQMASLLTNLRSLLPLEFIKVDDSSKIDL

XP_008439139.1 PREDICTED: transcription factor bHLH36-like [Cucumis melo]2.0e-1969.15Show/hide
Query:  MFPFNNDP------QTHLQNLFPSQIISPPEGSSSDNLHT-NKI-ETTQNEERKIMHRDLERERRKQMASLLTNLRSLLPLEFIKVDDSSKIDL
        MFPFN+        Q HLQNLF  Q+IS  EG SS+NL+T NKI ETTQNEE+KIMHRD+ERERRKQMASLLTNLRSLLPLEFIK    S++D+
Subjt:  MFPFNNDP------QTHLQNLFPSQIISPPEGSSSDNLHT-NKI-ETTQNEERKIMHRDLERERRKQMASLLTNLRSLLPLEFIKVDDSSKIDL

XP_022923000.1 transcription factor bHLH118-like [Cucurbita moschata]1.7e-1064.94Show/hide
Query:  MFPFNNDPQTHLQNLFPSQIISPPEGSSSDNLHTNKIETTQNEERKIMHRDLERERRKQMASLLTNLRSLLPLEFIK
        MFPFN+ P  H Q   P Q +S  EGSS   L+ NKIE+T NE RKI+HRDLERERRKQM SLLTNLRSLLPL+ ++
Subjt:  MFPFNNDPQTHLQNLFPSQIISPPEGSSSDNLHTNKIETTQNEERKIMHRDLERERRKQMASLLTNLRSLLPLEFIK

XP_038877683.1 transcription factor bHLH118-like [Benincasa hispida]5.7e-2280.72Show/hide
Query:  MFPFN----NDPQTHLQNLFPSQIISPPEGSSSDN-LHTNKIE-TTQNEERKIMHRDLERERRKQMASLLTNLRSLLPLEFIK
        MFPFN    +D Q+HLQNLF SQ+IS PEGSSSDN L+T++I+ TTQNEERKIMHRDLERERRKQMASLLTNLRSLLPLEFIK
Subjt:  MFPFN----NDPQTHLQNLFPSQIISPPEGSSSDN-LHTNKIE-TTQNEERKIMHRDLERERRKQMASLLTNLRSLLPLEFIK

TrEMBL top hitse value%identityAlignment
A0A0A0L9L0 BHLH domain-containing protein3.2e-1868.42Show/hide
Query:  MFPFN------NDPQTHLQNLFPSQIISPPEG-SSSDNLHTN-KI-ETTQNEERKIMHRDLERERRKQMASLLTNLRSLLPLEFIKVDDSSKIDL
        MFPFN      +D Q HLQNLF  Q+IS  EG S ++NL+TN KI ETTQNEE+KIMHRDLERERRKQM SLLTNLRSLLPLEFIK    S++D+
Subjt:  MFPFN------NDPQTHLQNLFPSQIISPPEG-SSSDNLHTN-KI-ETTQNEERKIMHRDLERERRKQMASLLTNLRSLLPLEFIKVDDSSKIDL

A0A1S3AY11 transcription factor bHLH36-like9.8e-2069.15Show/hide
Query:  MFPFNNDP------QTHLQNLFPSQIISPPEGSSSDNLHT-NKI-ETTQNEERKIMHRDLERERRKQMASLLTNLRSLLPLEFIKVDDSSKIDL
        MFPFN+        Q HLQNLF  Q+IS  EG SS+NL+T NKI ETTQNEE+KIMHRD+ERERRKQMASLLTNLRSLLPLEFIK    S++D+
Subjt:  MFPFNNDP------QTHLQNLFPSQIISPPEGSSSDNLHT-NKI-ETTQNEERKIMHRDLERERRKQMASLLTNLRSLLPLEFIKVDDSSKIDL

A0A6J1CHG5 transcription factor bHLH36-like5.4e-1057.14Show/hide
Query:  MFPFNNDPQTHLQNLFPSQIISPPEGSSSD-NLHTNKIETTQN------EERKIMHRDLERERRKQMASLLTNLRSLLPLEFIK
        MFPFN   +            S PEGSS D   H N +  ++N      ++RKIMHRDLERERRKQMASLLTNLRSLLPLEFIK
Subjt:  MFPFNNDPQTHLQNLFPSQIISPPEGSSSD-NLHTNKIETTQN------EERKIMHRDLERERRKQMASLLTNLRSLLPLEFIK

A0A6J1EAE1 transcription factor bHLH118-like8.3e-1164.94Show/hide
Query:  MFPFNNDPQTHLQNLFPSQIISPPEGSSSDNLHTNKIETTQNEERKIMHRDLERERRKQMASLLTNLRSLLPLEFIK
        MFPFN+ P  H Q   P Q +S  EGSS   L+ NKIE+T NE RKI+HRDLERERRKQM SLLTNLRSLLPL+ ++
Subjt:  MFPFNNDPQTHLQNLFPSQIISPPEGSSSDNLHTNKIETTQNEERKIMHRDLERERRKQMASLLTNLRSLLPLEFIK

A0A6J1JAJ0 transcription factor bHLH118-like9.2e-1062.34Show/hide
Query:  MFPFNNDPQTHLQNLFPSQIISPPEGSSSDNLHTNKIETTQNEERKIMHRDLERERRKQMASLLTNLRSLLPLEFIK
        MFPF NDP  H Q   P Q +S  EGSS   L+ NKIE+T NE R+I+HRDLERERRKQM SL T+LRSLLPL  ++
Subjt:  MFPFNNDPQTHLQNLFPSQIISPPEGSSSDNLHTNKIETTQNEERKIMHRDLERERRKQMASLLTNLRSLLPLEFIK

SwissProt top hitse value%identityAlignment
Q9FLI1 Transcription factor bHLH361.9e-0455.81Show/hide
Query:  KIMHRDLERERRKQMASLLTNLRSLLPLEFIKVDDSSKIDLHE
        K+MHR+ ER+RR++MASL  +LRSLLPL FIK   S+   ++E
Subjt:  KIMHRDLERERRKQMASLLTNLRSLLPLEFIKVDDSSKIDLHE

Arabidopsis top hitse value%identityAlignment
AT4G25400.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.5e-0459.38Show/hide
Query:  KIMHRDLERERRKQMASLLTNLRSLLPLEFIK
        K++H+++E+ RR++MASL  +LRSLLPLEFI+
Subjt:  KIMHRDLERERRKQMASLLTNLRSLLPLEFIK

AT4G25410.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.0e-0451.22Show/hide
Query:  ETTQN-EERKIMHRDLERERRKQMASLLTNLRSLLPLEFIK
        ET  N +++K++HRD+ER+RR++MA+L   LR+ LPL++IK
Subjt:  ETTQN-EERKIMHRDLERERRKQMASLLTNLRSLLPLEFIK

AT5G51780.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.4e-0555.81Show/hide
Query:  KIMHRDLERERRKQMASLLTNLRSLLPLEFIKVDDSSKIDLHE
        K+MHR+ ER+RR++MASL  +LRSLLPL FIK   S+   ++E
Subjt:  KIMHRDLERERRKQMASLLTNLRSLLPLEFIKVDDSSKIDLHE

AT5G51790.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein5.7e-0438.6Show/hide
Query:  PEGSSSDNLHTNKIETTQNE---ERKIMHRDLERERRKQMASLLTNLRSLLPLEFIK
        P  +     H + +   ++E   E+K++HR++ER+RR++MA L  +LRS LPL++IK
Subjt:  PEGSSSDNLHTNKIETTQNE---ERKIMHRDLERERRKQMASLLTNLRSLLPLEFIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCCTTTCAATAATGATCCCCAAACCCATCTCCAAAATCTCTTTCCTTCTCAAATAATTTCACCCCCAGAAGGAAGCAGTAGTGATAATCTTCATACCAACAAAAT
TGAAACCACTCAAAATGAAGAGAGGAAGATTATGCACAGAGATCTCGAACGAGAAAGAAGAAAACAAATGGCCTCTCTTCTCACCAACCTTCGATCCTTGCTTCCTCTTG
AATTTATAAAGGTAGATGATTCAAGCAAGATTGATCTGCATGAACTGGAACAAAAACTATATGAAGTTTGCAATTCTGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTCCTTTCAATAATGATCCCCAAACCCATCTCCAAAATCTCTTTCCTTCTCAAATAATTTCACCCCCAGAAGGAAGCAGTAGTGATAATCTTCATACCAACAAAAT
TGAAACCACTCAAAATGAAGAGAGGAAGATTATGCACAGAGATCTCGAACGAGAAAGAAGAAAACAAATGGCCTCTCTTCTCACCAACCTTCGATCCTTGCTTCCTCTTG
AATTTATAAAGGTAGATGATTCAAGCAAGATTGATCTGCATGAACTGGAACAAAAACTATATGAAGTTTGCAATTCTGAGTGA
Protein sequenceShow/hide protein sequence
MFPFNNDPQTHLQNLFPSQIISPPEGSSSDNLHTNKIETTQNEERKIMHRDLERERRKQMASLLTNLRSLLPLEFIKVDDSSKIDLHELEQKLYEVCNSE